Cow genome map

Conread name: Pig4-TMW8006O17

Conread position: 1-297
Cow position: chr16:46520902-46520593 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 303

Conread position: 1-375
Cow position: chr16:36792679-36793038 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 249
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 110

Conread position: 1-429
Cow position: chr16:25260268-25260689 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 198

Conread position: 1-464
Cow position: chr16:24988574-24988117 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-487
Cow position: chr16:28168175-28167696 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-507
Cow position: chr16:44127696-44127209 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 180

Conread position: 1-526
Cow position: chr16:37146120-37146638 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-529
Cow position: chr16:23876386-23875871 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 239

Conread position: 1-571
Cow position: chr16:34532436-34533000 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-573
Cow position: chr16:29036037-29036585 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 152

Conread position: 1-607
Cow position: chr16:658103-658696 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-614
Cow position: chr16:49254091-49253499 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 252

Conread position: 1-619
Cow position: chr16:3819509-3820130 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 307

Conread position: 1-625
Cow position: chr16:4343760-4343142 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 134

Conread position: 1-625
Cow position: chr16:12535795-12535190 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 331

Conread position: 1-628
Cow position: chr16:26653813-26654423 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 186

Conread position: 1-630
Cow position: chr16:11054140-11054758 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 165

Conread position: 1-631
Cow position: chr16:41036881-41036258 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 136

Conread position: 1-634
Cow position: chr16:53611951-53612574 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 265

Conread position: 1-635
Cow position: chr16:20377605-20378219 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 267

Conread position: 1-637
Cow position: chr16:2233566-2232950 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 43

Conread position: 1-637
Cow position: chr16:5525962-5525323 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 311

Conread position: 1-637
Cow position: chr16:12651071-12651696 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr16:15812212-15812858 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 307

Conread position: 1-637
Cow position: chr16:24210254-24209622 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 235

Conread position: 1-637
Cow position: chr16:25892677-25893284 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 14

Conread position: 1-637
Cow position: chr16:37443380-37442765 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 136

Conread position: 1-637
Cow position: chr16:42074744-42074122 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 82

Conread position: 1-637
Cow position: chr16:47403527-47404156 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 173

Conread position: 1-637
Cow position: chr16:55911639-55911035 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 51

Conread position: 1-649
Cow position: chr16:18694825-18694177 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 196

Conread position: 1-649
Cow position: chr16:20204144-20204786 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 309

Conread position: 1-649
Cow position: chr16:39615383-39616011 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 122

Conread position: 1-651
Cow position: chr16:29157792-29158402 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 95

Conread position: 1-652
Cow position: chr16:54180210-54179573 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 136

Conread position: 1-653
Cow position: chr16:13042387-13043031 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 172

Conread position: 1-656
Cow position: chr16:15187212-15187861 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 76

Conread position: 1-656
Cow position: chr16:15569913-15570566 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 96

Conread position: 1-656
Cow position: chr16:25964058-25964700 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 239

Conread position: 1-656
Cow position: chr16:45704648-45704001 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 99

Conread position: 1-660
Cow position: chr16:40680-41335 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 79

Conread position: 1-660
Cow position: chr16:236643-237278 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 159

Conread position: 1-660
Cow position: chr16:17141551-17142209 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 117

Conread position: 1-660
Cow position: chr16:24407054-24407713 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 307

Conread position: 1-660
Cow position: chr16:25087752-25088416 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 76

Conread position: 1-663
Cow position: chr16:51086926-51087586 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-663
Cow position: chr16:52526375-52527035 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-664
Cow position: chr16:193791-193133 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 85

Conread position: 1-664
Cow position: chr16:417037-417700 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-664
Cow position: chr16:2408751-2408088 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr16:2725079-2724419 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 135

Conread position: 1-664
Cow position: chr16:3148887-3148234 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 302

Conread position: 1-664
Cow position: chr16:3769867-3769203 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr16:4426234-4426895 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 308

Conread position: 1-664
Cow position: chr16:4462168-4461523 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 308

Conread position: 1-664
Cow position: chr16:4756166-4756815 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 302

Conread position: 1-664
Cow position: chr16:4973379-4972722 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 1-664
Cow position: chr16:10440383-10441043 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr16:11633700-11633039 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 169

Conread position: 1-664
Cow position: chr16:12161136-12160479 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 169

Conread position: 1-664
Cow position: chr16:14352537-14351879 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 167

Conread position: 1-664
Cow position: chr16:14662965-14662318 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr16:15311426-15312086 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr16:15494602-15495258 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 76

Conread position: 1-664
Cow position: chr16:15980234-15979573 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 169

Conread position: 1-664
Cow position: chr16:20277997-20278645 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 50

Conread position: 1-664
Cow position: chr16:21017703-21018364 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 307

Conread position: 1-664
Cow position: chr16:23562588-23563251 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 259

Conread position: 1-664
Cow position: chr16:25344121-25344784 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr16:25444021-25444681 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-664
Cow position: chr16:25455318-25454656 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 309

Conread position: 1-664
Cow position: chr16:27731238-27730576 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr16:28194157-28193496 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 50

Conread position: 1-664
Cow position: chr16:28206965-28206306 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 305

Conread position: 1-664
Cow position: chr16:31425197-31425863 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 250

Conread position: 1-664
Cow position: chr16:37478717-37478056 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr16:40294027-40293365 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr16:41033445-41034105 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 14

Conread position: 1-664
Cow position: chr16:43563249-43562591 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 113

Conread position: 1-664
Cow position: chr16:46554565-46555227 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 308

Conread position: 1-664
Cow position: chr16:47772405-47773068 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 195

Conread position: 2-487
Cow position: chr16:53991106-53991578 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 99

Conread position: 2-604
Cow position: chr16:31586552-31585959 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 283

Conread position: 2-617
Cow position: chr16:21189402-21190014 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 307

Conread position: 2-631
Cow position: chr16:7674316-7673693 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 241

Conread position: 2-656
Cow position: chr16:49219811-49219155 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 208

Conread position: 2-660
Cow position: chr16:26665848-26666505 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 307

Conread position: 2-664
Cow position: chr16:8813956-8813300 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 13

Conread position: 2-664
Cow position: chr16:23985455-23986118 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 309

Conread position: 2-664
Cow position: chr16:44049779-44049119 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 219

Conread position: 3-177
Cow position: chr16:4962804-4962626 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 127

Conread position: 3-556
Cow position: chr16:43293-43855 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 284

Conread position: 3-558
Cow position: chr16:26389021-26388471 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 307

Conread position: 3-582
Cow position: chr16:19722112-19722670 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 49

Conread position: 3-637
Cow position: chr16:16267751-16267133 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 167

Conread position: 3-663
Cow position: chr16:56914088-56913434 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 213

Conread position: 3-664
Cow position: chr16:839429-840075 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 212

Conread position: 3-664
Cow position: chr16:43895117-43894456 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 306

Conread position: 3-664
Cow position: chr16:46102471-46101814 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 237

Conread position: 5-174
Cow position: chr16:55867157-55867333 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 5-660
Cow position: chr16:41164624-41163974 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 304

Conread position: 5-664
Cow position: chr16:16150599-16149943 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 303

Conread position: 5-664
Cow position: chr16:26990792-26990135 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 107

Conread position: 7-509
Cow position: chr16:2394519-2395011 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 75

Conread position: 7-660
Cow position: chr16:3332061-3332695 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 146

Conread position: 7-664
Cow position: chr16:13422769-13422118 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 70

Conread position: 9-487
Cow position: chr16:3010990-3011461 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 186

Conread position: 9-664
Cow position: chr16:18975021-18975673 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 68

Conread position: 14-405
Cow position: chr16:42335159-42334774 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 259
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 11, 145

Conread position: 14-637
Cow position: chr16:41624503-41623915 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 88

Conread position: 26-622
Cow position: chr16:10860143-10859567 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 47

Conread position: 27-146
Cow position: chr16:8482858-8482739 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 98

Conread position: 27-664
Cow position: chr16:1733912-1734544 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 60

Conread position: 35-664
Cow position: chr16:7154785-7155405 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 96

Conread position: 36-664
Cow position: chr16:42210678-42211301 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 269

Conread position: 37-578
Cow position: chr16:51040740-51041252 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 116

Conread position: 37-610
Cow position: chr16:39475024-39475583 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 25

Conread position: 37-623
Cow position: chr16:13602445-13601882 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 25

Conread position: 37-624
Cow position: chr16:55591791-55591240 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 33

Conread position: 37-656
Cow position: chr16:37925789-37925187 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 44

Conread position: 37-659
Cow position: chr16:41515316-41515934 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 268

Conread position: 37-662
Cow position: chr16:43770963-43770354 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 129

Conread position: 37-664
Cow position: chr16:19081236-19081851 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 267

Conread position: 38-435
Cow position: chr16:54479391-54479778 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 266

Conread position: 42-595
Cow position: chr16:35273048-35273587 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 364
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 33, 40

Conread position: 46-553
Cow position: chr16:37487063-37486563 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 258

Conread position: 46-664
Cow position: chr16:2480947-2480350 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 53

Conread position: 48-615
Cow position: chr16:34482358-34482911 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 45

Conread position: 49-637
Cow position: chr16:8591609-8592166 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 140

Conread position: 49-664
Cow position: chr16:27593625-27593019 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 254

Conread position: 58-664
Cow position: chr16:14100060-14100653 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 69

Conread position: 71-637
Cow position: chr16:45608634-45609185 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 232

Conread position: 72-656
Cow position: chr16:28373559-28372987 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 373
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 318, 9

Conread position: 75-664
Cow position: chr16:20634991-20634422 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 54

Conread position: 75-664
Cow position: chr16:23533774-23533195 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 162

Conread position: 78-621
Cow position: chr16:39756770-39757295 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 351
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 313, 7

Conread position: 80-664
Cow position: chr16:5894670-5895237 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 34

Conread position: 84-617
Cow position: chr16:11309594-11310098 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 382, 23

Conread position: 84-630
Cow position: chr16:16539649-16540175 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 17

Conread position: 85-507
Cow position: chr16:53226086-53225673 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 143

Conread position: 85-654
Cow position: chr16:52589351-52588822 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 366
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 306, 43

Conread position: 87-664
Cow position: chr16:24241165-24240595 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 216

Conread position: 94-664
Cow position: chr16:28468881-28468318 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 209

Conread position: 95-649
Cow position: chr16:16095455-16095987 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 60

Conread position: 95-664
Cow position: chr16:49743265-49742725 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 70

Conread position: 96-656
Cow position: chr16:47367242-47367785 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 104

Conread position: 97-664
Cow position: chr16:10373189-10372631 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 206

Conread position: 99-514
Cow position: chr16:49170721-49170331 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 80

Conread position: 102-586
Cow position: chr16:14569940-14569474 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 35

Conread position: 102-631
Cow position: chr16:24925305-24925818 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 55

Conread position: 102-648
Cow position: chr16:19671986-19671465 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 129

Conread position: 105-664
Cow position: chr16:23249716-23249150 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 198

Conread position: 106-664
Cow position: chr16:6676974-6677526 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 198

Conread position: 110-628
Cow position: chr16:12244783-12244278 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 193

Conread position: 110-637
Cow position: chr16:37053296-37053814 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 193

Conread position: 115-628
Cow position: chr16:4398512-4399021 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 195

Conread position: 120-578
Cow position: chr16:5763115-5763556 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 59

Conread position: 121-649
Cow position: chr16:50713170-50712650 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 181

Conread position: 122-598
Cow position: chr16:15349877-15349417 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 181

Conread position: 122-664
Cow position: chr16:48410904-48411440 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 182

Conread position: 123-637
Cow position: chr16:25173521-25174015 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 30

Conread position: 124-524
Cow position: chr16:27710925-27710542 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 15

Conread position: 125-651
Cow position: chr16:37455204-37454697 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 159

Conread position: 129-619
Cow position: chr16:3349291-3349763 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 175

Conread position: 131-572
Cow position: chr16:13777190-13777608 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 81

Conread position: 135-664
Cow position: chr16:26627035-26627557 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 168

Conread position: 136-637
Cow position: chr16:45559578-45560067 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 161

Conread position: 137-664
Cow position: chr16:18651296-18650779 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 10

Conread position: 144-664
Cow position: chr16:40878884-40879397 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 159

Conread position: 152-664
Cow position: chr16:5435125-5435630 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 151

Conread position: 153-582
Cow position: chr16:15256169-15255761 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 151

Conread position: 153-625
Cow position: chr16:5416966-5416512 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 102

Conread position: 153-637
Cow position: chr16:37058708-37058239 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 154

Conread position: 153-637
Cow position: chr16:45533769-45534238 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 44

Conread position: 154-664
Cow position: chr16:7303058-7303561 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 149

Conread position: 160-664
Cow position: chr16:1958415-1957921 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 146

Conread position: 160-664
Cow position: chr16:45465609-45465116 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 143

Conread position: 161-664
Cow position: chr16:599738-600225 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 32

Conread position: 161-664
Cow position: chr16:37446389-37445899 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 142

Conread position: 162-320
Cow position: chr16:43988117-43987960 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 73, 47

Conread position: 162-650
Cow position: chr16:37671185-37670719 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 75

Conread position: 165-637
Cow position: chr16:52856529-52856070 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 141

Conread position: 166-664
Cow position: chr16:24615751-24615270 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 137

Conread position: 167-649
Cow position: chr16:9610408-9609941 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 311
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 70, 9

Conread position: 168-664
Cow position: chr16:22799388-22798899 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 139

Conread position: 172-664
Cow position: chr16:1564065-1563583 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 37

Conread position: 176-664
Cow position: chr16:44256799-44256331 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 127

Conread position: 182-664
Cow position: chr16:41575584-41576044 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 121

Conread position: 183-638
Cow position: chr16:32326195-32326640 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 120

Conread position: 184-637
Cow position: chr16:36246809-36247245 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 71

Conread position: 185-649
Cow position: chr16:8482285-8481839 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 50

Conread position: 187-651
Cow position: chr16:5833115-5833587 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 38

Conread position: 189-656
Cow position: chr16:25042393-25042850 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 5

Conread position: 193-637
Cow position: chr16:5756280-5756715 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 86

Conread position: 193-664
Cow position: chr16:12485959-12485495 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 110

Conread position: 201-664
Cow position: chr16:25074942-25075398 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 102

Conread position: 202-593
Cow position: chr16:6264627-6264240 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 101

Conread position: 202-615
Cow position: chr16:54323068-54322669 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 101

Conread position: 210-637
Cow position: chr16:13722231-13721813 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 12

Conread position: 213-621
Cow position: chr16:42711552-42711159 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 283
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 178, 87

Conread position: 213-636
Cow position: chr16:26500024-26500421 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 88

Conread position: 216-636
Cow position: chr16:55681878-55682275 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 68

Conread position: 220-657
Cow position: chr16:12736644-12737077 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 90

Conread position: 220-664
Cow position: chr16:14039794-14040230 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 83

Conread position: 223-660
Cow position: chr16:47018377-47017953 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 14

Conread position: 227-651
Cow position: chr16:701636-702051 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 10

Conread position: 232-649
Cow position: chr16:41805061-41804668 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 72

Conread position: 236-664
Cow position: chr16:25879700-25880121 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 67

Conread position: 239-574
Cow position: chr16:6706328-6706002 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 64

Conread position: 243-479
Cow position: chr16:7084094-7084315 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 246-656
Cow position: chr16:49127295-49126911 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 30

Conread position: 249-664
Cow position: chr16:49780553-49780145 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 54

Conread position: 259-625
Cow position: chr16:28268308-28267952 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 44

Conread position: 263-637
Cow position: chr16:5665509-5665877 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 47

Conread position: 264-651
Cow position: chr16:18745618-18745250 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 39

Conread position: 266-651
Cow position: chr16:2304774-2305154 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 37

Conread position: 278-635
Cow position: chr16:15485207-15485561 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 18

Conread position: 284-658
Cow position: chr16:51401124-51400764 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 19

Conread position: 304-660
Cow position: chr16:27012841-27013198 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 134

Conread position: 311-664
Cow position: chr16:25935191-25935548 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 139

Conread position: 319-434
Cow position: chr16:7341296-7341179 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 319-533
Cow position: chr16:46365348-46365130 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 72, 120

Conread position: 319-637
Cow position: chr16:23711833-23711511 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-649
Cow position: chr16:49142619-49142285 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 129

Conread position: 319-651
Cow position: chr16:7457528-7457194 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 119

Conread position: 319-660
Cow position: chr16:4721938-4722280 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 97

Conread position: 319-664
Cow position: chr16:2960133-2960484 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-664
Cow position: chr16:5488325-5488676 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 121

Conread position: 319-664
Cow position: chr16:18212741-18212390 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-664
Cow position: chr16:25168691-25169031 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 72, 92

Conread position: 319-664
Cow position: chr16:41834335-41834671 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 58

Conread position: 320-509
Cow position: chr16:16237558-16237367 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 69, 87

Conread position: 320-664
Cow position: chr16:29050099-29050450 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 83

Conread position: 321-664
Cow position: chr16:24988048-24987699 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 118

Conread position: 322-656
Cow position: chr16:20434050-20434376 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 215
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 83, 27

Conread position: 326-583
Cow position: chr16:54293418-54293666 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 34

Conread position: 326-622
Cow position: chr16:44704081-44704375 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 196
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 101

Conread position: 326-628
Cow position: chr16:17124838-17125140 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 71

Conread position: 326-631
Cow position: chr16:29093589-29093891 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 65, 26

Conread position: 326-651
Cow position: chr16:5632548-5632221 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 65, 181

Conread position: 327-533
Cow position: chr16:5725854-5726063 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 63, 92

Conread position: 327-637
Cow position: chr16:42733824-42733510 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 110

Conread position: 330-650
Cow position: chr16:15116508-15116190 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 206
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 102

Conread position: 332-628
Cow position: chr16:23809988-23810284 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 119

Conread position: 333-586
Cow position: chr16:18425871-18426131 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 58, 182

Conread position: 337-629
Cow position: chr16:29512248-29512538 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 112

Conread position: 340-532
Cow position: chr16:20968473-20968281 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 91

Conread position: 340-664
Cow position: chr16:7385240-7385570 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 110

Conread position: 342-656
Cow position: chr16:54231865-54231551 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 89

Conread position: 342-663
Cow position: chr16:39033856-39033541 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 50

Conread position: 343-656
Cow position: chr16:50190636-50190320 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 95

Conread position: 347-628
Cow position: chr16:16681113-16680828 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 92

Conread position: 347-664
Cow position: chr16:49516302-49515976 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 23, 68

Conread position: 349-664
Cow position: chr16:24637030-24636711 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 90

Conread position: 354-637
Cow position: chr16:53510035-53509755 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 48

Conread position: 358-603
Cow position: chr16:15409596-15409343 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 197
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 33, 55

Conread position: 360-525
Cow position: chr16:24702593-24702425 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 46

Conread position: 363-637
Cow position: chr16:42751648-42751919 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 22, 78

Conread position: 368-651
Cow position: chr16:9785811-9786105 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 89

Conread position: 376-656
Cow position: chr16:26975690-26975412 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 64

Conread position: 388-664
Cow position: chr16:5350983-5350703 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 40

Conread position: 390-631
Cow position: chr16:54703024-54703266 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 58, 38

Conread position: 390-637
Cow position: chr16:44675880-44676130 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 46

Conread position: 394-651
Cow position: chr16:49577522-49577766 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 249, 52

Conread position: 406-664
Cow position: chr16:51640792-51641052 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 83, 41

Conread position: 411-664
Cow position: chr16:42745924-42745679 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 228, 36

Conread position: 414-664
Cow position: chr16:15369547-15369796 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 24

Conread position: 416-649
Cow position: chr16:2224396-2224163 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 70, 22

Conread position: 416-658
Cow position: chr16:19062389-19062634 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 73, 31

Conread position: 424-635
Cow position: chr16:5844468-5844687 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 12, 24

Conread position: 441-664
Cow position: chr16:39456966-39457192 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 51, 70

Conread position: 452-637
Cow position: chr16:2963269-2963081 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 59

Conread position: 452-664
Cow position: chr16:23059499-23059283 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 37, 63

Conread position: 456-634
Cow position: chr16:48495326-48495146 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 63

Conread position: 468-641
Cow position: chr16:21090696-21090872 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 42

Conread position: 469-663
Cow position: chr16:54228683-54228483 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 23, 46

Conread position: 482-656
Cow position: chr16:45798969-45799142 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 58, 35

Conread position: 485-649
Cow position: chr16:19409730-19409568 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 485-651
Cow position: chr16:7009952-7010116 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 490-661
Cow position: chr16:3027062-3027235 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 144
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 150, 21

Conread position: 490-661
Cow position: chr16:3030642-3030469 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 144
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 150, 21

Conread position: 492-664
Cow position: chr16:825105-825277 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 147, 19

Conread position: 493-636
Cow position: chr16:18204861-18205003 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 493-664
Cow position: chr16:53622209-53622039 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 154, 18

Conread position: 507-654
Cow position: chr16:46223865-46223715 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 37

Conread position: 509-648
Cow position: chr16:16625003-16625142 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 136, 52

Conread position: 517-630
Cow position: chr16:23147219-23147106 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.