Cow genome map

Conread name: Pig4-TMW8006O17

Conread position: 1-383
Cow position: chr17:23510740-23510361 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 267
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 45, 19

Conread position: 1-426
Cow position: chr17:13930601-13931018 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-573
Cow position: chr17:1784842-1784273 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 306

Conread position: 1-583
Cow position: chr17:15140635-15140057 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 254

Conread position: 1-586
Cow position: chr17:10270641-10270074 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 161

Conread position: 1-609
Cow position: chr17:14871383-14871991 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 13

Conread position: 1-622
Cow position: chr17:240992-241616 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 161

Conread position: 1-623
Cow position: chr17:8204640-8205273 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 66

Conread position: 1-624
Cow position: chr17:20214806-20215406 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 108

Conread position: 1-634
Cow position: chr17:4210633-4211262 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 311

Conread position: 1-637
Cow position: chr17:138316-138938 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 243

Conread position: 1-637
Cow position: chr17:183850-184483 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 308

Conread position: 1-637
Cow position: chr17:1312058-1311427 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 305

Conread position: 1-637
Cow position: chr17:4481180-4480546 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 309

Conread position: 1-637
Cow position: chr17:15709290-15708657 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr17:16118743-16118129 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 92

Conread position: 1-640
Cow position: chr17:1655055-1654425 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 123

Conread position: 1-645
Cow position: chr17:40810454-40811087 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 308

Conread position: 1-649
Cow position: chr17:16870557-16869951 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 118

Conread position: 1-649
Cow position: chr17:27977824-27978453 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 67

Conread position: 1-651
Cow position: chr17:6071241-6071893 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 305

Conread position: 1-651
Cow position: chr17:20085102-20084464 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 39

Conread position: 1-656
Cow position: chr17:2176686-2177331 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 242

Conread position: 1-656
Cow position: chr17:16855390-16854740 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 125

Conread position: 1-656
Cow position: chr17:29075624-29075018 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 94

Conread position: 1-660
Cow position: chr17:731781-731137 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 74

Conread position: 1-660
Cow position: chr17:14242537-14243187 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 125

Conread position: 1-660
Cow position: chr17:22249547-22248891 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 253

Conread position: 1-660
Cow position: chr17:25739008-25739657 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 274

Conread position: 1-664
Cow position: chr17:147624-148273 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 236

Conread position: 1-664
Cow position: chr17:452556-453205 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 137

Conread position: 1-664
Cow position: chr17:1969855-1970516 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 307

Conread position: 1-664
Cow position: chr17:2264897-2265553 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 76

Conread position: 1-664
Cow position: chr17:4063044-4063696 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 129

Conread position: 1-664
Cow position: chr17:6262560-6263219 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 181

Conread position: 1-664
Cow position: chr17:8222398-8223070 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 318

Conread position: 1-664
Cow position: chr17:14029642-14028982 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 308

Conread position: 1-664
Cow position: chr17:15438508-15439156 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 14

Conread position: 1-664
Cow position: chr17:15853433-15854100 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 312

Conread position: 1-664
Cow position: chr17:17127697-17128369 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 257

Conread position: 1-664
Cow position: chr17:20390477-20391139 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr17:20545840-20546502 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 112

Conread position: 1-664
Cow position: chr17:21770382-21771045 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 309

Conread position: 1-664
Cow position: chr17:23321720-23321055 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 314

Conread position: 1-664
Cow position: chr17:24027280-24026620 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr17:24784898-24785555 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 124

Conread position: 1-664
Cow position: chr17:27792071-27791427 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 225

Conread position: 1-664
Cow position: chr17:30182878-30182216 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 2-623
Cow position: chr17:20642425-20643031 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 46

Conread position: 2-634
Cow position: chr17:2078360-2078971 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 131

Conread position: 2-637
Cow position: chr17:29949922-29950548 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 105

Conread position: 2-664
Cow position: chr17:1882965-1883608 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 97

Conread position: 2-664
Cow position: chr17:22562857-22563509 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 41

Conread position: 3-403
Cow position: chr17:1709023-1708629 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 159

Conread position: 3-403
Cow position: chr17:1712191-1711797 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 159

Conread position: 3-635
Cow position: chr17:14250402-14249771 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 82

Conread position: 3-637
Cow position: chr17:15808695-15809323 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 303

Conread position: 3-637
Cow position: chr17:29825256-29824624 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 306

Conread position: 3-637
Cow position: chr17:43991196-43991820 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 166

Conread position: 3-649
Cow position: chr17:22500104-22500735 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 413
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 12, 28

Conread position: 3-664
Cow position: chr17:6122484-6123148 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 310

Conread position: 3-664
Cow position: chr17:15327986-15328646 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 306

Conread position: 3-664
Cow position: chr17:18100370-18099709 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 231

Conread position: 4-649
Cow position: chr17:13674804-13674142 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 78

Conread position: 5-664
Cow position: chr17:19215688-19215046 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 302

Conread position: 7-650
Cow position: chr17:145462-144856 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 118

Conread position: 7-656
Cow position: chr17:4084780-4085421 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 179

Conread position: 7-664
Cow position: chr17:2245345-2244708 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 94

Conread position: 9-654
Cow position: chr17:9752508-9753138 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 102

Conread position: 20-664
Cow position: chr17:1569488-1568856 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 27

Conread position: 37-649
Cow position: chr17:6081253-6081838 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 144

Conread position: 37-649
Cow position: chr17:15117561-15118166 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 267

Conread position: 37-656
Cow position: chr17:18892427-18893020 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 399
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 241, 10

Conread position: 37-660
Cow position: chr17:1457637-1457019 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 141

Conread position: 37-664
Cow position: chr17:2838778-2839383 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 267

Conread position: 38-638
Cow position: chr17:22237304-22237884 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 393
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 8, 45

Conread position: 41-604
Cow position: chr17:15307627-15307114 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 174

Conread position: 41-634
Cow position: chr17:20094407-20093827 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 196

Conread position: 42-649
Cow position: chr17:43443741-43443140 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 406
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 134, 57

Conread position: 62-651
Cow position: chr17:21766667-21767240 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 243

Conread position: 66-415
Cow position: chr17:9905721-9905366 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 147

Conread position: 70-630
Cow position: chr17:158062-158621 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 58

Conread position: 71-435
Cow position: chr17:15325456-15325104 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 121

Conread position: 71-461
Cow position: chr17:44641691-44641313 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 232

Conread position: 77-637
Cow position: chr17:11618987-11619531 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 158

Conread position: 80-631
Cow position: chr17:15721393-15721922 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 51

Conread position: 80-650
Cow position: chr17:30412759-30413319 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 17

Conread position: 85-487
Cow position: chr17:15229238-15228857 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 14

Conread position: 96-664
Cow position: chr17:37529168-37528607 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 207

Conread position: 102-664
Cow position: chr17:11084314-11083770 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 80

Conread position: 106-664
Cow position: chr17:26829925-26829379 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 21

Conread position: 115-649
Cow position: chr17:44865484-44864961 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 131

Conread position: 116-651
Cow position: chr17:29212456-29212978 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 189

Conread position: 120-660
Cow position: chr17:20210055-20209514 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 106

Conread position: 120-664
Cow position: chr17:6611849-6612387 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 184

Conread position: 120-664
Cow position: chr17:43471760-43471226 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 17

Conread position: 121-664
Cow position: chr17:34236422-34235886 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 182

Conread position: 123-526
Cow position: chr17:30264-30645 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 181

Conread position: 124-637
Cow position: chr17:17221149-17221648 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 179

Conread position: 126-510
Cow position: chr17:27434455-27434842 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 258
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 265, 191

Conread position: 128-635
Cow position: chr17:20033275-20033743 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 107

Conread position: 135-446
Cow position: chr17:11381159-11381455 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 148

Conread position: 144-637
Cow position: chr17:18241850-18242316 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 158

Conread position: 164-422
Cow position: chr17:43231296-43231049 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 139

Conread position: 164-651
Cow position: chr17:14006299-14006766 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 139

Conread position: 172-662
Cow position: chr17:5639009-5638529 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 131

Conread position: 172-662
Cow position: chr17:5672637-5672157 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 131

Conread position: 173-651
Cow position: chr17:23338170-23337702 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 138

Conread position: 182-637
Cow position: chr17:18200628-18201057 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 121

Conread position: 183-509
Cow position: chr17:14865493-14865175 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 120

Conread position: 183-664
Cow position: chr17:5806598-5806124 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 120

Conread position: 184-529
Cow position: chr17:14932975-14932639 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 119

Conread position: 185-613
Cow position: chr17:15350942-15351348 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 186-663
Cow position: chr17:16447584-16447118 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 117

Conread position: 195-472
Cow position: chr17:16463986-16464246 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 105

Conread position: 196-624
Cow position: chr17:20078750-20078352 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 45

Conread position: 204-643
Cow position: chr17:3305486-3305932 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 100

Conread position: 212-604
Cow position: chr17:11032071-11032452 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 90

Conread position: 212-637
Cow position: chr17:13990348-13989929 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 283
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 6

Conread position: 215-622
Cow position: chr17:30426836-30427236 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 265
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 174, 28

Conread position: 219-664
Cow position: chr17:18777903-18777467 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 84

Conread position: 220-632
Cow position: chr17:31232607-31233001 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 83

Conread position: 220-664
Cow position: chr17:13921174-13921595 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 287
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 171, 64

Conread position: 226-664
Cow position: chr17:8211995-8212421 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 77

Conread position: 228-656
Cow position: chr17:2698489-2698909 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 286
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 162, 79

Conread position: 229-551
Cow position: chr17:5546348-5546033 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 208
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 162, 74

Conread position: 229-664
Cow position: chr17:36790008-36790431 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 46

Conread position: 231-664
Cow position: chr17:13910672-13910252 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 74

Conread position: 237-656
Cow position: chr17:37415943-37415532 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 66

Conread position: 239-488
Cow position: chr17:15128333-15128570 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 152, 64

Conread position: 239-664
Cow position: chr17:20225549-20225967 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 64

Conread position: 241-660
Cow position: chr17:16903534-16903940 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 62

Conread position: 244-656
Cow position: chr17:4635823-4635429 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 59

Conread position: 249-574
Cow position: chr17:14232747-14232431 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 53

Conread position: 282-664
Cow position: chr17:36284244-36284632 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 287-630
Cow position: chr17:24312109-24312454 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 228
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 40

Conread position: 310-618
Cow position: chr17:16896860-16896545 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 81, 130

Conread position: 318-619
Cow position: chr17:43227354-43227650 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 202
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 76

Conread position: 319-424
Cow position: chr17:5174801-5174694 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 319-637
Cow position: chr17:44481859-44482183 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 72, 30

Conread position: 319-656
Cow position: chr17:28024888-28024528 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 111

Conread position: 319-660
Cow position: chr17:18123657-18123315 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 131

Conread position: 319-664
Cow position: chr17:1672314-1672662 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 30

Conread position: 319-664
Cow position: chr17:2583406-2583752 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 131

Conread position: 319-664
Cow position: chr17:21666018-21666364 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 125

Conread position: 320-578
Cow position: chr17:11338134-11337892 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 166, 69

Conread position: 320-664
Cow position: chr17:51084-50739 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 118

Conread position: 320-664
Cow position: chr17:29471454-29471795 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 96

Conread position: 321-664
Cow position: chr17:6955663-6956004 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 62

Conread position: 326-607
Cow position: chr17:36816908-36817181 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 63, 87

Conread position: 326-622
Cow position: chr17:33792104-33792393 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 163, 70

Conread position: 327-634
Cow position: chr17:29897665-29897968 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 46, 65

Conread position: 328-575
Cow position: chr17:4570236-4570487 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 57, 115

Conread position: 329-664
Cow position: chr17:17957621-17957962 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 110

Conread position: 332-622
Cow position: chr17:23735756-23736041 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 191
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 85

Conread position: 332-631
Cow position: chr17:41893361-41893061 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 205
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 59, 47

Conread position: 334-664
Cow position: chr17:8994307-8993975 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 113

Conread position: 340-525
Cow position: chr17:42247815-42247640 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 49, 73

Conread position: 341-623
Cow position: chr17:16417040-16416758 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 184
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 130, 50

Conread position: 344-664
Cow position: chr17:38991792-38992117 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 94

Conread position: 345-664
Cow position: chr17:39824155-39823829 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 95

Conread position: 354-664
Cow position: chr17:3780704-3781016 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 13, 82

Conread position: 388-664
Cow position: chr17:2201382-2201662 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 59

Conread position: 389-636
Cow position: chr17:36747435-36747194 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 391-637
Cow position: chr17:8449801-8450046 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 85, 55

Conread position: 401-634
Cow position: chr17:15335341-15335106 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 88, 45

Conread position: 414-583
Cow position: chr17:24876887-24876722 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 34

Conread position: 418-597
Cow position: chr17:18721499-18721330 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 437-645
Cow position: chr17:12290354-12290142 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 74

Conread position: 440-660
Cow position: chr17:42313020-42313245 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 75

Conread position: 447-664
Cow position: chr17:13725407-13725627 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 42, 68

Conread position: 449-649
Cow position: chr17:18814300-18814504 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 90

Conread position: 452-664
Cow position: chr17:980037-979820 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 37, 63

Conread position: 481-660
Cow position: chr17:997999-997815 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 491-664
Cow position: chr17:20272372-20272198 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 144, 20

Conread position: 492-664
Cow position: chr17:15228637-15228463 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 95, 20

Conread position: 500-629
Cow position: chr17:24617983-24618112 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 518-634
Cow position: chr17:2033709-2033825 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.