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Cow genome map

           
Conread name:
           
Pig4-TMW8006O17
        

               
Conread position:
               
1-184
               

               
Cow position:
               
chr28:3012924-3012745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr28:5569243-5569542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 160
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr28:34582796-34583214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 308
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr28:7829379-7829798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 206
               

               
Conread position:
               
1-481
               

               
Cow position:
               
chr28:30305136-30304665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 92
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr28:12217417-12216901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 308
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chr28:22230457-22229939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 86
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr28:30534189-30533653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 309
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr28:7443597-7443038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 308
               

               
Conread position:
               
1-564
               

               
Cow position:
               
chr28:4929578-4929018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 308
               

               
Conread position:
               
1-583
               

               
Cow position:
               
chr28:3645322-3645885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
1-597
               

               
Cow position:
               
chr28:15604483-15605083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 293
               

               
Conread position:
               
1-610
               

               
Cow position:
               
chr28:6472565-6471962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 250
               

               
Conread position:
               
1-617
               

               
Cow position:
               
chr28:12997557-12998162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 142
               

               
Conread position:
               
1-619
               

               
Cow position:
               
chr28:15600862-15600270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 222
               

               
Conread position:
               
1-623
               

               
Cow position:
               
chr28:3004649-3004030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 292
               

               
Conread position:
               
1-630
               

               
Cow position:
               
chr28:14666019-14666643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 199
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr28:6230815-6230197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 195
               

               
Conread position:
               
1-634
               

               
Cow position:
               
chr28:1812087-1811482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 194
               

               
Conread position:
               
1-634
               

               
Cow position:
               
chr28:4213765-4214392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 183
               

               
Conread position:
               
1-634
               

               
Cow position:
               
chr28:20935541-20934910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 309
               

               
Conread position:
               
1-634
               

               
Cow position:
               
chr28:21568778-21569400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr28:4958637-4958002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 138
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr28:5210994-5211626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 308
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr28:5636923-5637555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 289
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr28:7907672-7907041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 307
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr28:10302712-10303342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 107
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr28:14511319-14511938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 145
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr28:15917653-15917022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 308
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr28:21896167-21896786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr28:6474375-6473750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
1-649
               

               
Cow position:
               
chr28:16181240-16181884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 312
               

               
Conread position:
               
1-656
               

               
Cow position:
               
chr28:32786551-32785908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 250
               

               
Conread position:
               
1-660
               

               
Cow position:
               
chr28:1384595-1383922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 92
               

               
Conread position:
               
1-660
               

               
Cow position:
               
chr28:10771957-10772606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 162
               

               
Conread position:
               
1-660
               

               
Cow position:
               
chr28:12650102-12650747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 308
               

               
Conread position:
               
1-661
               

               
Cow position:
               
chr28:25069714-25070380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 120
               

               
Conread position:
               
1-663
               

               
Cow position:
               
chr28:17391287-17391966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 326
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:482836-482176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 308
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:785539-786195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 307
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:1956243-1956897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 142
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:2644587-2645247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 308
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:3626887-3627547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 157
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:5111847-5111190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 306
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:5748834-5748172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 308
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:5824707-5825379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 298
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:5940358-5941020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 308
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:6478092-6478752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:6535924-6535263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:6777132-6776470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 309
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:7004898-7005562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 309
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:9181742-9182403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:13462836-13463497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:17664095-17663415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 326
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:18517272-18516611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 307
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:22255326-22254668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 308
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:23310463-23309802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:24885733-24886394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 133
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:25849433-25850095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 308
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:26420128-26419467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 275
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:26923757-26923094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 141
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:28357911-28357250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 174
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:28470895-28471553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 310
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:28935091-28934429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 308
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:29036780-29036118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 308
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:30097750-30098410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 308
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:33255194-33255854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
1-664
               

               
Cow position:
               
chr28:34597118-34597779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
2-487
               

               
Cow position:
               
chr28:28184258-28184744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 233
               

               
Conread position:
               
2-637
               

               
Cow position:
               
chr28:8718079-8717448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
2-637
               

               
Cow position:
               
chr28:17603151-17602536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
2-651
               

               
Cow position:
               
chr28:6959106-6959750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 303
               

               
Conread position:
               
2-651
               

               
Cow position:
               
chr28:25827240-25826591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 155
               

               
Conread position:
               
2-664
               

               
Cow position:
               
chr28:444280-444942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 308
               

               
Conread position:
               
2-664
               

               
Cow position:
               
chr28:20967796-20967135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 307
               

               
Conread position:
               
2-664
               

               
Cow position:
               
chr28:33639443-33640102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 306
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr28:13373924-13373652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
12, 157
               

               
Conread position:
               
3-484
               

               
Cow position:
               
chr28:2088447-2088922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 306
               

               
Conread position:
               
3-509
               

               
Cow position:
               
chr28:5571514-5572021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 242
               

               
Conread position:
               
3-664
               

               
Cow position:
               
chr28:1507750-1508412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 306
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr28:3652122-3652467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 149
               

               
Conread position:
               
4-664
               

               
Cow position:
               
chr28:6046672-6047325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 130
               

               
Conread position:
               
5-649
               

               
Cow position:
               
chr28:21362390-21363025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 253
               

               
Conread position:
               
6-634
               

               
Cow position:
               
chr28:17600108-17599483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 129
               

               
Conread position:
               
7-479
               

               
Cow position:
               
chr28:1196990-1197472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
7-631
               

               
Cow position:
               
chr28:10325949-10326554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
10-637
               

               
Cow position:
               
chr28:1025449-1024828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 131
               

               
Conread position:
               
11-527
               

               
Cow position:
               
chr28:16041770-16041269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 122
               

               
Conread position:
               
14-468
               

               
Cow position:
               
chr28:24670679-24671130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 252
               

               
Conread position:
               
22-625
               

               
Cow position:
               
chr28:23619862-23620435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 42
               

               
Conread position:
               
26-664
               

               
Cow position:
               
chr28:34730632-34731265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
37-498
               

               
Cow position:
               
chr28:12047623-12047177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 200
               

               
Conread position:
               
37-610
               

               
Cow position:
               
chr28:24498963-24499528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 130
               

               
Conread position:
               
37-629
               

               
Cow position:
               
chr28:5311887-5312471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 267
               

               
Conread position:
               
37-630
               

               
Cow position:
               
chr28:15352204-15351626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 128
               

               
Conread position:
               
37-649
               

               
Cow position:
               
chr28:3744886-3745471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 205
               

               
Conread position:
               
37-664
               

               
Cow position:
               
chr28:10479961-10479366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
37-664
               

               
Cow position:
               
chr28:15054073-15054690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 207
               

               
Conread position:
               
40-648
               

               
Cow position:
               
chr28:10294732-10295317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 66
               

               
Conread position:
               
47-664
               

               
Cow position:
               
chr28:29823110-29823719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
344, 256
               

               
Conread position:
               
60-652
               

               
Cow position:
               
chr28:19834044-19834620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 122
               

               
Conread position:
               
65-651
               

               
Cow position:
               
chr28:11502274-11501704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 238
               

               
Conread position:
               
71-624
               

               
Cow position:
               
chr28:601225-600688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 49
               

               
Conread position:
               
71-637
               

               
Cow position:
               
chr28:7335931-7336488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 232
               

               
Conread position:
               
71-637
               

               
Cow position:
               
chr28:23674751-23675318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 239
               

               
Conread position:
               
71-664
               

               
Cow position:
               
chr28:7059178-7059764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 232
               

               
Conread position:
               
72-637
               

               
Cow position:
               
chr28:22200916-22201453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 5
               

               
Conread position:
               
80-630
               

               
Cow position:
               
chr28:30960503-30961036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 172
               

               
Conread position:
               
81-649
               

               
Cow position:
               
chr28:32276513-32277074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 223
               

               
Conread position:
               
84-631
               

               
Cow position:
               
chr28:10576055-10575522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 86
               

               
Conread position:
               
86-637
               

               
Cow position:
               
chr28:21768330-21767799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 217
               

               
Conread position:
               
89-598
               

               
Cow position:
               
chr28:13522653-13523149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 64
               

               
Conread position:
               
91-637
               

               
Cow position:
               
chr28:25701964-25701443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 42
               

               
Conread position:
               
95-637
               

               
Cow position:
               
chr28:7744075-7744603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 208
               

               
Conread position:
               
106-664
               

               
Cow position:
               
chr28:9288410-9287859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 197
               

               
Conread position:
               
111-651
               

               
Cow position:
               
chr28:17031102-17030576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
119-664
               

               
Cow position:
               
chr28:10194609-10194071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 184
               

               
Conread position:
               
119-664
               

               
Cow position:
               
chr28:21104973-21104445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 9
               

               
Conread position:
               
120-664
               

               
Cow position:
               
chr28:13323130-13323667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 183
               

               
Conread position:
               
137-664
               

               
Cow position:
               
chr28:34083255-34082736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 62
               

               
Conread position:
               
153-660
               

               
Cow position:
               
chr28:25408660-25409164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 80
               

               
Conread position:
               
162-637
               

               
Cow position:
               
chr28:7685897-7685438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 141
               

               
Conread position:
               
166-475
               

               
Cow position:
               
chr28:23839063-23839354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 137
               

               
Conread position:
               
167-664
               

               
Cow position:
               
chr28:5772472-5772942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 35
               

               
Conread position:
               
170-637
               

               
Cow position:
               
chr28:5770069-5770524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 67
               

               
Conread position:
               
182-664
               

               
Cow position:
               
chr28:30870139-30870608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 45
               

               
Conread position:
               
194-649
               

               
Cow position:
               
chr28:32301516-32301074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 112
               

               
Conread position:
               
202-525
               

               
Cow position:
               
chr28:331821-331507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 101
               

               
Conread position:
               
202-637
               

               
Cow position:
               
chr28:5116982-5117406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
199, 79
               

               
Conread position:
               
215-664
               

               
Cow position:
               
chr28:16597242-16597681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 88
               

               
Conread position:
               
227-568
               

               
Cow position:
               
chr28:23025478-23025808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
164, 70
               

               
Conread position:
               
229-619
               

               
Cow position:
               
chr28:3461992-3462371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
169, 68
               

               
Conread position:
               
234-640
               

               
Cow position:
               
chr28:15687412-15687799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 51
               

               
Conread position:
               
239-641
               

               
Cow position:
               
chr28:15266273-15265873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 51
               

               
Conread position:
               
239-664
               

               
Cow position:
               
chr28:24992603-24993021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 64
               

               
Conread position:
               
241-656
               

               
Cow position:
               
chr28:10473085-10473484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 62
               

               
Conread position:
               
241-664
               

               
Cow position:
               
chr28:1198313-1198729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 62
               

               
Conread position:
               
245-622
               

               
Cow position:
               
chr28:12407057-12406674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 76
               

               
Conread position:
               
249-664
               

               
Cow position:
               
chr28:3001730-3001327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 54
               

               
Conread position:
               
255-656
               

               
Cow position:
               
chr28:23615275-23615668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 46
               

               
Conread position:
               
263-649
               

               
Cow position:
               
chr28:29807314-29806923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 159
               

               
Conread position:
               
271-664
               

               
Cow position:
               
chr28:28723376-28723757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 32
               

               
Conread position:
               
284-663
               

               
Cow position:
               
chr28:10578948-10578564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 69
               

               
Conread position:
               
312-630
               

               
Cow position:
               
chr28:2223190-2222866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 202
               

               
Conread position:
               
312-631
               

               
Cow position:
               
chr28:29435626-29435308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 94
               

               
Conread position:
               
314-637
               

               
Cow position:
               
chr28:4376235-4375917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
110, 76
               

               
Conread position:
               
319-549
               

               
Cow position:
               
chr28:12169826-12170052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
319-629
               

               
Cow position:
               
chr28:20629906-20629594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 131
               

               
Conread position:
               
319-631
               

               
Cow position:
               
chr28:14492502-14492812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 96
               

               
Conread position:
               
319-637
               

               
Cow position:
               
chr28:13373355-13373042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 119
               

               
Conread position:
               
319-648
               

               
Cow position:
               
chr28:28635289-28635622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 88
               

               
Conread position:
               
319-651
               

               
Cow position:
               
chr28:6061098-6060779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
319-664
               

               
Cow position:
               
chr28:1944112-1943762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 92
               

               
Conread position:
               
319-664
               

               
Cow position:
               
chr28:24488202-24487858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
319-664
               

               
Cow position:
               
chr28:32588882-32589233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
321-649
               

               
Cow position:
               
chr28:21379680-21380011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 99
               

               
Conread position:
               
321-664
               

               
Cow position:
               
chr28:12936089-12935740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
321-664
               

               
Cow position:
               
chr28:25828580-25828929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 118
               

               
Conread position:
               
324-645
               

               
Cow position:
               
chr28:24564635-24564309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
67, 121
               

               
Conread position:
               
326-509
               

               
Cow position:
               
chr28:1836983-1837162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
326-637
               

               
Cow position:
               
chr28:4386864-4386565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
48, 84
               

               
Conread position:
               
326-663
               

               
Cow position:
               
chr28:29223095-29222753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 113
               

               
Conread position:
               
326-664
               

               
Cow position:
               
chr28:14150178-14150522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 114
               

               
Conread position:
               
327-656
               

               
Cow position:
               
chr28:25847202-25847529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
310, 98
               

               
Conread position:
               
328-637
               

               
Cow position:
               
chr28:13725127-13725436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
332-664
               

               
Cow position:
               
chr28:34879244-34878916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
333-475
               

               
Cow position:
               
chr28:33688791-33688935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
333-649
               

               
Cow position:
               
chr28:12429405-12429721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
340-664
               

               
Cow position:
               
chr28:23543830-23544157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
345-637
               

               
Cow position:
               
chr28:18140503-18140209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
46, 77
               

               
Conread position:
               
346-664
               

               
Cow position:
               
chr28:23868448-23868768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 94
               

               
Conread position:
               
348-637
               

               
Cow position:
               
chr28:31322406-31322687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
43, 91
               

               
Conread position:
               
353-660
               

               
Cow position:
               
chr28:5336588-5336275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
356-526
               

               
Cow position:
               
chr28:28340076-28340249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
356-570
               

               
Cow position:
               
chr28:19300275-19300488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
8, 71
               

               
Conread position:
               
364-637
               

               
Cow position:
               
chr28:5768179-5768455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
390-649
               

               
Cow position:
               
chr28:16212073-16211817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 51
               

               
Conread position:
               
406-649
               

               
Cow position:
               
chr28:12081649-12081413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
5, 33
               

               
Conread position:
               
437-637
               

               
Cow position:
               
chr28:5816923-5817126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
51, 78
               

               
Conread position:
               
447-634
               

               
Cow position:
               
chr28:1214469-1214279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
447-654
               

               
Cow position:
               
chr28:17131824-17131612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
447-664
               

               
Cow position:
               
chr28:15032789-15032567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
41, 64
               

               
Conread position:
               
447-664
               

               
Cow position:
               
chr28:19193832-19194052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
461-664
               

               
Cow position:
               
chr28:12156005-12156213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
478-640
               

               
Cow position:
               
chr28:2122908-2123069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
479-619
               

               
Cow position:
               
chr28:5791818-5791955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
481-637
               

               
Cow position:
               
chr28:25726476-25726631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
481-637
               

               
Cow position:
               
chr28:29198827-29198982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
485-662
               

               
Cow position:
               
chr28:13864904-13865083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
492-660
               

               
Cow position:
               
chr28:24644821-24644990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
145, 19
               

               
Conread position:
               
497-664
               

               
Cow position:
               
chr28:5367993-5367825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
140, 14
               

               
Conread position:
               
508-664
               

               
Cow position:
               
chr28:30304075-30303920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
132, 79
               

               
Conread position:
               
509-637
               

               
Cow position:
               
chr28:25248496-25248624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.