Cow genome map
| Conread name: | Pig4-TMW8006O17 | 
| Conread position: | 1-301 | 
| Cow position: | chr3:63000601-63000295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 1-314 | 
| Cow position: | chr3:6875515-6875198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 18 | 
| Conread position: | 1-389 | 
| Cow position: | chr3:77706583-77706963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 262 | 
| Conread position: | 1-419 | 
| Cow position: | chr3:59332214-59332628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 144 | 
| Conread position: | 1-476 | 
| Cow position: | chr3:45567968-45568457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 501 | 
| Alignm identity: | 367 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 162 | 
| Conread position: | 1-485 | 
| Cow position: | chr3:14054030-14054507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-487 | 
| Cow position: | chr3:32620284-32619809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 375 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 284 | 
| Conread position: | 1-487 | 
| Cow position: | chr3:66622970-66623448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 374 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 214 | 
| Conread position: | 1-508 | 
| Cow position: | chr3:19798395-19797890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 520 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-532 | 
| Cow position: | chr3:58034888-58034359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 548 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 316 | 
| Conread position: | 1-549 | 
| Cow position: | chr3:40285559-40285017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 558 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 312 | 
| Conread position: | 1-549 | 
| Cow position: | chr3:57554529-57555071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 565 | 
| Alignm identity: | 429 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 117 | 
| Conread position: | 1-551 | 
| Cow position: | chr3:22338665-22339210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 562 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-551 | 
| Cow position: | chr3:37280152-37280699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 563 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-571 | 
| Cow position: | chr3:1033619-1034186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 583 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-572 | 
| Cow position: | chr3:63239256-63238711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 580 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 117 | 
| Conread position: | 1-574 | 
| Cow position: | chr3:31121386-31120810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 444 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 314 | 
| Conread position: | 1-574 | 
| Cow position: | chr3:56337197-56336651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 582 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 162 | 
| Conread position: | 1-581 | 
| Cow position: | chr3:74850386-74849813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 19 | 
| Conread position: | 1-586 | 
| Cow position: | chr3:58103344-58103922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 375 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 24, 134 | 
| Conread position: | 1-613 | 
| Cow position: | chr3:22725012-22724405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 627 | 
| Alignm identity: | 453 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 119 | 
| Conread position: | 1-619 | 
| Cow position: | chr3:31418293-31418906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 631 | 
| Alignm identity: | 470 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 145 | 
| Conread position: | 1-625 | 
| Cow position: | chr3:49463796-49463173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 466 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 268 | 
| Conread position: | 1-630 | 
| Cow position: | chr3:30321019-30321639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 488 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 50 | 
| Conread position: | 1-630 | 
| Cow position: | chr3:38496532-38497176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 666 | 
| Alignm identity: | 461 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 109 | 
| Conread position: | 1-631 | 
| Cow position: | chr3:18353599-18352985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 436 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 79 | 
| Conread position: | 1-631 | 
| Cow position: | chr3:24263070-24262463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 443 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 63 | 
| Conread position: | 1-631 | 
| Cow position: | chr3:82931392-82932003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 444 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 161 | 
| Conread position: | 1-633 | 
| Cow position: | chr3:68870993-68870364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 488 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-635 | 
| Cow position: | chr3:15416223-15416854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 496 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:1740115-1739483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 487 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 33 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:2866898-2866265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 492 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:6864424-6865048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 487 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 183 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:15656530-15655926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 464 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 135 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:16294153-16293527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 511 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 81 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:19883227-19883848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 484 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 162 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:20379960-20379329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 494 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:26743114-26742483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 495 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 134 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:32490956-32490323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 494 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:34504366-34503746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 481 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 308 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:43525982-43525350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 486 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:46505525-46506158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 489 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:50204302-50204954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 668 | 
| Alignm identity: | 487 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 328 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:53880510-53879877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 498 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:56297141-56297774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 488 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:56485503-56484865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 654 | 
| Alignm identity: | 491 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:68717950-68717321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 482 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 14 | 
| Conread position: | 1-637 | 
| Cow position: | chr3:83767010-83767635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 483 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-638 | 
| Cow position: | chr3:27245930-27245303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 473 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 241 | 
| Conread position: | 1-638 | 
| Cow position: | chr3:49611451-49610820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 488 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-640 | 
| Cow position: | chr3:64170987-64171632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 455 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 117 | 
| Conread position: | 1-641 | 
| Cow position: | chr3:25689412-25690039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 485 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 309 | 
| Conread position: | 1-649 | 
| Cow position: | chr3:227116-226489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 481 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 161 | 
| Conread position: | 1-649 | 
| Cow position: | chr3:24638168-24638807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 664 | 
| Alignm identity: | 502 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 66 | 
| Conread position: | 1-649 | 
| Cow position: | chr3:53048026-53047392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 492 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 151 | 
| Conread position: | 1-649 | 
| Cow position: | chr3:64697586-64698201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 466 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 160 | 
| Conread position: | 1-650 | 
| Cow position: | chr3:19108323-19108960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 451 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 230 | 
| Conread position: | 1-651 | 
| Cow position: | chr3:43190513-43189867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 516 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-651 | 
| Cow position: | chr3:50346581-50347213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 484 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 82 | 
| Conread position: | 1-652 | 
| Cow position: | chr3:26533237-26532601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 663 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 132 | 
| Conread position: | 1-654 | 
| Cow position: | chr3:14467121-14466454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 677 | 
| Alignm identity: | 485 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 133 | 
| Conread position: | 1-659 | 
| Cow position: | chr3:23170437-23169813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 482 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 241 | 
| Conread position: | 1-660 | 
| Cow position: | chr3:7246347-7245691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 674 | 
| Alignm identity: | 514 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-660 | 
| Cow position: | chr3:13276520-13275863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 674 | 
| Alignm identity: | 514 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 88 | 
| Conread position: | 1-660 | 
| Cow position: | chr3:24264959-24265613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 674 | 
| Alignm identity: | 509 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 294 | 
| Conread position: | 1-660 | 
| Cow position: | chr3:31934576-31933923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 673 | 
| Alignm identity: | 474 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 134 | 
| Conread position: | 1-660 | 
| Cow position: | chr3:35611911-35612562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 673 | 
| Alignm identity: | 497 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-660 | 
| Cow position: | chr3:56645573-56644916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 674 | 
| Alignm identity: | 507 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 133 | 
| Conread position: | 1-660 | 
| Cow position: | chr3:61173254-61173906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 670 | 
| Alignm identity: | 495 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 305 | 
| Conread position: | 1-660 | 
| Cow position: | chr3:75039085-75038427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 676 | 
| Alignm identity: | 526 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-660 | 
| Cow position: | chr3:78024673-78024025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 674 | 
| Alignm identity: | 505 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 279 | 
| Conread position: | 1-660 | 
| Cow position: | chr3:81100843-81101493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 517 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 50 | 
| Conread position: | 1-661 | 
| Cow position: | chr3:3653527-3652886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 496 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 127 | 
| Conread position: | 1-663 | 
| Cow position: | chr3:66888439-66887780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 677 | 
| Alignm identity: | 510 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:596877-597526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 677 | 
| Alignm identity: | 506 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 185 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:2708112-2707456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 513 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:6688570-6689248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 683 | 
| Alignm identity: | 500 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 305 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:7477164-7476501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 680 | 
| Alignm identity: | 519 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:10243418-10244078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 516 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:13723955-13723293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 681 | 
| Alignm identity: | 520 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 8 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:16225638-16226293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 672 | 
| Alignm identity: | 514 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 304 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:18814263-18814924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 677 | 
| Alignm identity: | 524 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:18862198-18862859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 517 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 197 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:19753971-19753316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 677 | 
| Alignm identity: | 518 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 309 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:19941651-19942301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 676 | 
| Alignm identity: | 497 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 305 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:21179499-21178838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 522 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 99 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:21593041-21593701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 677 | 
| Alignm identity: | 513 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:23204916-23204258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 679 | 
| Alignm identity: | 512 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 212 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:24573401-24572750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 677 | 
| Alignm identity: | 494 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 261 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:31021440-31022098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 507 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 125 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:31396155-31396786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 503 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 76 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:36875310-36874642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 684 | 
| Alignm identity: | 513 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 314 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:38095657-38096319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 505 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:38869331-38869984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 503 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 76 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:40048646-40049307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 677 | 
| Alignm identity: | 510 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:40337386-40336727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 510 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 240 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:40826154-40826815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 679 | 
| Alignm identity: | 519 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 309 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:45977259-45977918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 509 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:46858526-46857865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 680 | 
| Alignm identity: | 517 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 268 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:48603008-48603680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 687 | 
| Alignm identity: | 512 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:49542444-49541789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 504 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:49563767-49564435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 685 | 
| Alignm identity: | 520 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:49605682-49605024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 509 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 248 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:49998895-49999554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 677 | 
| Alignm identity: | 505 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 162 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:56102503-56103158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 680 | 
| Alignm identity: | 475 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 56 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:56148047-56148714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 685 | 
| Alignm identity: | 516 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 165 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:57742279-57742930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 674 | 
| Alignm identity: | 500 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 74 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:61677302-61677955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 680 | 
| Alignm identity: | 525 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 97 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:65988676-65989328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 683 | 
| Alignm identity: | 498 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 150 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:66969123-66968461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 501 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 313 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:68889814-68889154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 506 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 307 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:69931077-69930418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 680 | 
| Alignm identity: | 516 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:74060231-74060887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 136 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:76001198-76000540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 682 | 
| Alignm identity: | 509 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 234 | 
| Conread position: | 1-664 | 
| Cow position: | chr3:76864188-76864850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 507 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 308 | 
| Conread position: | 2-381 | 
| Cow position: | chr3:29644116-29644494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 157 | 
| Conread position: | 2-519 | 
| Cow position: | chr3:6713767-6714280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 89 | 
| Conread position: | 2-535 | 
| Cow position: | chr3:33692269-33691762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 541 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 36 | 
| Conread position: | 2-585 | 
| Cow position: | chr3:21004573-21005154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 601 | 
| Alignm identity: | 446 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 285 | 
| Conread position: | 2-653 | 
| Cow position: | chr3:27091406-27090787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 23, 37 | 
| Conread position: | 2-654 | 
| Cow position: | chr3:24586470-24585825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 494 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 140 | 
| Conread position: | 2-660 | 
| Cow position: | chr3:26992886-26993539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 672 | 
| Alignm identity: | 480 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 265 | 
| Conread position: | 2-660 | 
| Cow position: | chr3:57455728-57456359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 493 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 98 | 
| Conread position: | 2-662 | 
| Cow position: | chr3:37971802-37972445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 672 | 
| Alignm identity: | 497 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 88 | 
| Conread position: | 2-664 | 
| Cow position: | chr3:77426461-77427091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 671 | 
| Alignm identity: | 488 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 110 | 
| Conread position: | 3-631 | 
| Cow position: | chr3:12253807-12254424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 212 | 
| Conread position: | 3-633 | 
| Cow position: | chr3:48240015-48240637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 485 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 41 | 
| Conread position: | 3-635 | 
| Cow position: | chr3:36171172-36170559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 203 | 
| Conread position: | 3-637 | 
| Cow position: | chr3:27783540-27782941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 463 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 184 | 
| Conread position: | 3-637 | 
| Cow position: | chr3:45185223-45184598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 513 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 136 | 
| Conread position: | 3-649 | 
| Cow position: | chr3:17057299-17056667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 670 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 180 | 
| Conread position: | 3-651 | 
| Cow position: | chr3:56719566-56718928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 455 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 212 | 
| Conread position: | 3-658 | 
| Cow position: | chr3:56101035-56101663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 672 | 
| Alignm identity: | 456 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 137 | 
| Conread position: | 3-664 | 
| Cow position: | chr3:23287576-23286918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 674 | 
| Alignm identity: | 507 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 305 | 
| Conread position: | 3-664 | 
| Cow position: | chr3:30616178-30615522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 676 | 
| Alignm identity: | 511 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 306 | 
| Conread position: | 3-664 | 
| Cow position: | chr3:44926574-44927232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 680 | 
| Alignm identity: | 505 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 138 | 
| Conread position: | 3-664 | 
| Cow position: | chr3:57481977-57481327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 672 | 
| Alignm identity: | 498 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 132 | 
| Conread position: | 3-664 | 
| Cow position: | chr3:58950222-58950877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 675 | 
| Alignm identity: | 504 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 74 | 
| Conread position: | 3-664 | 
| Cow position: | chr3:72632829-72633491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 679 | 
| Alignm identity: | 521 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 309 | 
| Conread position: | 5-502 | 
| Cow position: | chr3:3060623-3061102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 128 | 
| Conread position: | 5-630 | 
| Cow position: | chr3:68697204-68696583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 638 | 
| Alignm identity: | 480 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 304 | 
| Conread position: | 5-637 | 
| Cow position: | chr3:29574365-29573738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 496 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 304 | 
| Conread position: | 5-650 | 
| Cow position: | chr3:63736150-63736794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 472 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 217 | 
| Conread position: | 5-664 | 
| Cow position: | chr3:64653430-64654087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 676 | 
| Alignm identity: | 514 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 252 | 
| Conread position: | 6-651 | 
| Cow position: | chr3:54654419-54653767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 501 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 237 | 
| Conread position: | 7-618 | 
| Cow position: | chr3:38251614-38252201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 621 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 60 | 
| Conread position: | 7-664 | 
| Cow position: | chr3:47078851-47078194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 672 | 
| Alignm identity: | 504 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 300 | 
| Conread position: | 8-664 | 
| Cow position: | chr3:2366126-2365491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 668 | 
| Alignm identity: | 484 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 133 | 
| Conread position: | 8-664 | 
| Cow position: | chr3:5951852-5951205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 493 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 301 | 
| Conread position: | 9-485 | 
| Cow position: | chr3:61277340-61277801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 42 | 
| Conread position: | 9-654 | 
| Cow position: | chr3:31748424-31749084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 675 | 
| Alignm identity: | 465 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 96 | 
| Conread position: | 10-651 | 
| Cow position: | chr3:75165324-75164672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 677 | 
| Alignm identity: | 447 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 249 | 
| Conread position: | 10-655 | 
| Cow position: | chr3:60178325-60177695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 655 | 
| Alignm identity: | 430 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 118 | 
| Conread position: | 11-664 | 
| Cow position: | chr3:49908249-49907614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 472 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 105 | 
| Conread position: | 12-664 | 
| Cow position: | chr3:37893601-37894250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 499 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 239 | 
| Conread position: | 15-651 | 
| Cow position: | chr3:46014904-46014280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 446 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 43 | 
| Conread position: | 19-664 | 
| Cow position: | chr3:7856200-7856840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 482 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 291 | 
| Conread position: | 21-637 | 
| Cow position: | chr3:42977806-42977203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 628 | 
| Alignm identity: | 476 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 287 | 
| Conread position: | 26-634 | 
| Cow position: | chr3:48096297-48095717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 612 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 399, 138 | 
| Conread position: | 26-664 | 
| Cow position: | chr3:5474324-5474958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 498 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 280 | 
| Conread position: | 37-291 | 
| Cow position: | chr3:23941637-23941385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 9, 83 | 
| Conread position: | 37-467 | 
| Cow position: | chr3:5446114-5445700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 267 | 
| Conread position: | 37-501 | 
| Cow position: | chr3:2921059-2921512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 115 | 
| Conread position: | 37-614 | 
| Cow position: | chr3:68510538-68509972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 582 | 
| Alignm identity: | 450 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 267 | 
| Conread position: | 37-619 | 
| Cow position: | chr3:54087573-54087004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 588 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 254 | 
| Conread position: | 37-631 | 
| Cow position: | chr3:12676830-12676256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 605 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 354, 107 | 
| Conread position: | 37-637 | 
| Cow position: | chr3:64376910-64376326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 607 | 
| Alignm identity: | 472 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 352, 200 | 
| Conread position: | 37-649 | 
| Cow position: | chr3:4030553-4031145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 620 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 201 | 
| Conread position: | 37-651 | 
| Cow position: | chr3:17938203-17937612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 618 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 420, 266 | 
| Conread position: | 37-660 | 
| Cow position: | chr3:2904641-2904042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 630 | 
| Alignm identity: | 489 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 158 | 
| Conread position: | 37-664 | 
| Cow position: | chr3:18886264-18886876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 636 | 
| Alignm identity: | 472 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 354, 155 | 
| Conread position: | 37-664 | 
| Cow position: | chr3:19880849-19881468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 637 | 
| Alignm identity: | 482 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 97 | 
| Conread position: | 37-664 | 
| Cow position: | chr3:37627694-37628301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 630 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 354, 148 | 
| Conread position: | 37-664 | 
| Cow position: | chr3:40102048-40101441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 636 | 
| Alignm identity: | 459 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 352, 34 | 
| Conread position: | 38-651 | 
| Cow position: | chr3:50461151-50461715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 617 | 
| Alignm identity: | 435 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 512, 119 | 
| Conread position: | 38-664 | 
| Cow position: | chr3:66830140-66829530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 636 | 
| Alignm identity: | 470 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 48 | 
| Conread position: | 42-654 | 
| Cow position: | chr3:6896646-6897236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 629 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 15 | 
| Conread position: | 42-664 | 
| Cow position: | chr3:3552128-3552734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 626 | 
| Alignm identity: | 464 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 347, 203 | 
| Conread position: | 45-301 | 
| Cow position: | chr3:2852674-2852411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 131, 246 | 
| Conread position: | 46-630 | 
| Cow position: | chr3:2790559-2791131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 457 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 343, 257 | 
| Conread position: | 46-664 | 
| Cow position: | chr3:64875594-64876191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 626 | 
| Alignm identity: | 452 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 343, 76 | 
| Conread position: | 47-654 | 
| Cow position: | chr3:19831344-19830750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 613 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 342, 155 | 
| Conread position: | 49-649 | 
| Cow position: | chr3:28435888-28435295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 609 | 
| Alignm identity: | 469 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 342, 254 | 
| Conread position: | 49-664 | 
| Cow position: | chr3:2834728-2834120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 624 | 
| Alignm identity: | 476 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 342, 254 | 
| Conread position: | 50-629 | 
| Cow position: | chr3:35342462-35343032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 586 | 
| Alignm identity: | 450 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 341, 253 | 
| Conread position: | 55-626 | 
| Cow position: | chr3:76187349-76187917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 578 | 
| Alignm identity: | 443 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 336, 225 | 
| Conread position: | 58-637 | 
| Cow position: | chr3:14679907-14680477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 586 | 
| Alignm identity: | 451 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 333, 245 | 
| Conread position: | 58-637 | 
| Cow position: | chr3:20795113-20795683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 586 | 
| Alignm identity: | 447 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 331, 245 | 
| Conread position: | 58-664 | 
| Cow position: | chr3:7155987-7155388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 615 | 
| Alignm identity: | 471 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 333, 245 | 
| Conread position: | 65-586 | 
| Cow position: | chr3:7354394-7354912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 55, 175 | 
| Conread position: | 67-581 | 
| Cow position: | chr3:77726303-77726784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 516 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 84 | 
| Conread position: | 68-404 | 
| Cow position: | chr3:52451249-52451570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 198, 48 | 
| Conread position: | 68-648 | 
| Cow position: | chr3:15663607-15663048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 323, 105 | 
| Conread position: | 71-630 | 
| Cow position: | chr3:63148803-63148258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 411, 66 | 
| Conread position: | 71-634 | 
| Cow position: | chr3:55373923-55374462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 158, 88 | 
| Conread position: | 71-664 | 
| Cow position: | chr3:6528825-6529411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 602 | 
| Alignm identity: | 458 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 320, 232 | 
| Conread position: | 71-664 | 
| Cow position: | chr3:47273047-47272460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 603 | 
| Alignm identity: | 453 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 292, 232 | 
| Conread position: | 72-598 | 
| Cow position: | chr3:43084076-43084590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 295, 231 | 
| Conread position: | 72-656 | 
| Cow position: | chr3:42994037-42993464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 149 | 
| Conread position: | 72-664 | 
| Cow position: | chr3:823257-822671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 602 | 
| Alignm identity: | 458 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 175, 232 | 
| Conread position: | 74-399 | 
| Cow position: | chr3:37349312-37349005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 9e-26 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 74-651 | 
| Cow position: | chr3:35885278-35884717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 587 | 
| Alignm identity: | 435 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 11 | 
| Conread position: | 74-664 | 
| Cow position: | chr3:42846189-42846762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 596 | 
| Alignm identity: | 456 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 415, 145 | 
| Conread position: | 77-583 | 
| Cow position: | chr3:24530541-24531032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 511 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 315, 207 | 
| Conread position: | 78-664 | 
| Cow position: | chr3:72175463-72174887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 595 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 313, 114 | 
| Conread position: | 79-631 | 
| Cow position: | chr3:77225576-77226105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 312, 164 | 
| Conread position: | 80-637 | 
| Cow position: | chr3:49134693-49134147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 311, 12 | 
| Conread position: | 81-637 | 
| Cow position: | chr3:33269081-33269613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 563 | 
| Alignm identity: | 435 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 310, 138 | 
| Conread position: | 81-637 | 
| Cow position: | chr3:64317583-64318127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 562 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 272, 153 | 
| Conread position: | 81-664 | 
| Cow position: | chr3:2572370-2572946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 454 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 308, 222 | 
| Conread position: | 83-652 | 
| Cow position: | chr3:82363635-82364182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 579 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 308, 70 | 
| Conread position: | 84-637 | 
| Cow position: | chr3:47690843-47691362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 556 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 307, 126 | 
| Conread position: | 85-664 | 
| Cow position: | chr3:73636728-73637298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 589 | 
| Alignm identity: | 453 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 306, 218 | 
| Conread position: | 86-629 | 
| Cow position: | chr3:3983960-3984491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 366, 97 | 
| Conread position: | 87-581 | 
| Cow position: | chr3:32204824-32204332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 508 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 177, 42 | 
| Conread position: | 87-664 | 
| Cow position: | chr3:52150437-52149867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 586 | 
| Alignm identity: | 452 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 302, 216 | 
| Conread position: | 87-664 | 
| Cow position: | chr3:72669713-72669141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 588 | 
| Alignm identity: | 451 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 304, 216 | 
| Conread position: | 91-664 | 
| Cow position: | chr3:6837882-6838448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 582 | 
| Alignm identity: | 441 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 300, 212 | 
| Conread position: | 95-651 | 
| Cow position: | chr3:12749757-12750302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 293, 208 | 
| Conread position: | 101-651 | 
| Cow position: | chr3:70914403-70913865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 205 | 
| Conread position: | 102-649 | 
| Cow position: | chr3:27547582-27547035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 53 | 
| Conread position: | 102-660 | 
| Cow position: | chr3:45311657-45312190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 563 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 288, 13 | 
| Conread position: | 105-485 | 
| Cow position: | chr3:83700453-83700083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 49 | 
| Conread position: | 105-649 | 
| Cow position: | chr3:15570311-15570832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 376 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 320, 48 | 
| Conread position: | 116-660 | 
| Cow position: | chr3:40521062-40520525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 275, 187 | 
| Conread position: | 117-624 | 
| Cow position: | chr3:30938379-30938875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 517 | 
| Alignm identity: | 366 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 265, 72 | 
| Conread position: | 120-367 | 
| Cow position: | chr3:5946407-5946169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 116, 44 | 
| Conread position: | 122-664 | 
| Cow position: | chr3:65473314-65473845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 551 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 269, 181 | 
| Conread position: | 126-532 | 
| Cow position: | chr3:34027987-34027590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 265, 177 | 
| Conread position: | 126-664 | 
| Cow position: | chr3:84198687-84199191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 548 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 263, 27 | 
| Conread position: | 129-631 | 
| Cow position: | chr3:41582283-41582771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 514 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 56, 101 | 
| Conread position: | 132-656 | 
| Cow position: | chr3:79979294-79978780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 537 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 108, 13 | 
| Conread position: | 135-405 | 
| Cow position: | chr3:44504649-44504390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 25, 12 | 
| Conread position: | 135-664 | 
| Cow position: | chr3:11417443-11417965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 256, 168 | 
| Conread position: | 137-563 | 
| Cow position: | chr3:39856362-39856779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 252, 166 | 
| Conread position: | 137-664 | 
| Cow position: | chr3:13312107-13311583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 540 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 242, 166 | 
| Conread position: | 138-502 | 
| Cow position: | chr3:13115536-13115187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 253, 52 | 
| Conread position: | 141-664 | 
| Cow position: | chr3:13035593-13035077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 532 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 250, 162 | 
| Conread position: | 144-492 | 
| Cow position: | chr3:54777840-54778176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 247, 37 | 
| Conread position: | 144-631 | 
| Cow position: | chr3:11384222-11384696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 380 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 161 | 
| Conread position: | 144-664 | 
| Cow position: | chr3:78519953-78520466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 529 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 247, 159 | 
| Conread position: | 151-532 | 
| Cow position: | chr3:6854705-6854342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 51 | 
| Conread position: | 153-637 | 
| Cow position: | chr3:68273755-68274230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 372 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 238, 150 | 
| Conread position: | 154-459 | 
| Cow position: | chr3:48527473-48527768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 23, 156 | 
| Conread position: | 154-634 | 
| Cow position: | chr3:45615252-45615714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 126 | 
| Conread position: | 154-651 | 
| Cow position: | chr3:48272695-48273184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 503 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 237, 144 | 
| Conread position: | 158-660 | 
| Cow position: | chr3:56696768-56697252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 508 | 
| Alignm identity: | 375 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 231, 145 | 
| Conread position: | 159-630 | 
| Cow position: | chr3:34116443-34115981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 231, 54 | 
| Conread position: | 159-656 | 
| Cow position: | chr3:31224200-31224685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 503 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 232, 125 | 
| Conread position: | 163-664 | 
| Cow position: | chr3:302156-302640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 228, 140 | 
| Conread position: | 164-664 | 
| Cow position: | chr3:20475439-20475926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 140 | 
| Conread position: | 166-648 | 
| Cow position: | chr3:34557441-34556975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 13 | 
| Conread position: | 167-664 | 
| Cow position: | chr3:41019385-41018892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 509 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 222, 136 | 
| Conread position: | 170-637 | 
| Cow position: | chr3:25056621-25057070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 198, 120 | 
| Conread position: | 175-649 | 
| Cow position: | chr3:54680909-54680445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 90, 82 | 
| Conread position: | 177-637 | 
| Cow position: | chr3:4039992-4039540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 214, 58 | 
| Conread position: | 179-492 | 
| Cow position: | chr3:37021467-37021169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 212, 97 | 
| Conread position: | 179-662 | 
| Cow position: | chr3:27454992-27454521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 213, 124 | 
| Conread position: | 180-664 | 
| Cow position: | chr3:19215857-19216319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 124 | 
| Conread position: | 181-651 | 
| Cow position: | chr3:6442012-6442474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 363 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 208, 54 | 
| Conread position: | 182-387 | 
| Cow position: | chr3:11782003-11781811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 121, 0 | 
| Conread position: | 182-664 | 
| Cow position: | chr3:47986385-47986858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 372 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 209, 63 | 
| Conread position: | 183-614 | 
| Cow position: | chr3:30908752-30909183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 206, 53 | 
| Conread position: | 183-664 | 
| Cow position: | chr3:49930780-49931254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 208, 120 | 
| Conread position: | 184-443 | 
| Cow position: | chr3:4161791-4161532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 131, 119 | 
| Conread position: | 184-623 | 
| Cow position: | chr3:57968090-57968513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 9e-26 | 
| Alignm gaps (pig, cow): | 209, 92 | 
| Conread position: | 184-664 | 
| Cow position: | chr3:36121121-36121594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 207, 119 | 
| Conread position: | 184-664 | 
| Cow position: | chr3:36671675-36671199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 206, 119 | 
| Conread position: | 184-664 | 
| Cow position: | chr3:65084880-65085352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 366 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 205, 119 | 
| Conread position: | 185-664 | 
| Cow position: | chr3:35918511-35918978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 206, 118 | 
| Conread position: | 187-509 | 
| Cow position: | chr3:46899727-46900033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 7.00649e-45 | 
| Alignm gaps (pig, cow): | 202, 114 | 
| Conread position: | 187-664 | 
| Cow position: | chr3:14863833-14864301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 372 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 27 | 
| Conread position: | 194-425 | 
| Cow position: | chr3:2508372-2508152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 61, 111 | 
| Conread position: | 194-649 | 
| Cow position: | chr3:49732839-49732396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 197, 109 | 
| Conread position: | 195-664 | 
| Cow position: | chr3:2074740-2075199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 196, 68 | 
| Conread position: | 195-664 | 
| Cow position: | chr3:60185226-60184749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 291, 108 | 
| Conread position: | 196-664 | 
| Cow position: | chr3:42508251-42507795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 193, 107 | 
| Conread position: | 197-649 | 
| Cow position: | chr3:23497799-23497356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 194, 110 | 
| Conread position: | 201-563 | 
| Cow position: | chr3:32412523-32412170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 190, 102 | 
| Conread position: | 201-637 | 
| Cow position: | chr3:14212353-14212780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 188, 102 | 
| Conread position: | 201-664 | 
| Cow position: | chr3:21000126-20999653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 188, 102 | 
| Conread position: | 202-637 | 
| Cow position: | chr3:35619521-35619942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 189, 101 | 
| Conread position: | 204-664 | 
| Cow position: | chr3:49387618-49388068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 34 | 
| Conread position: | 205-660 | 
| Cow position: | chr3:3031218-3031649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 236, 70 | 
| Conread position: | 212-650 | 
| Cow position: | chr3:54863648-54863217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 66 | 
| Conread position: | 212-664 | 
| Cow position: | chr3:31423153-31422703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 91 | 
| Conread position: | 213-431 | 
| Cow position: | chr3:45237515-45237310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 178, 90 | 
| Conread position: | 214-615 | 
| Cow position: | chr3:35854608-35854202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 177, 89 | 
| Conread position: | 214-661 | 
| Cow position: | chr3:12667680-12668115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 177, 90 | 
| Conread position: | 214-664 | 
| Cow position: | chr3:30351251-30351694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 177, 89 | 
| Conread position: | 221-664 | 
| Cow position: | chr3:79668087-79668529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 85 | 
| Conread position: | 223-481 | 
| Cow position: | chr3:53674236-53673990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 168, 80 | 
| Conread position: | 223-651 | 
| Cow position: | chr3:16114389-16114812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 17, 79 | 
| Conread position: | 223-656 | 
| Cow position: | chr3:33125270-33124844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 168, 80 | 
| Conread position: | 224-574 | 
| Cow position: | chr3:4191951-4191610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 167, 79 | 
| Conread position: | 224-592 | 
| Cow position: | chr3:69962868-69962501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 64 | 
| Conread position: | 225-487 | 
| Cow position: | chr3:45947829-45947586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 166, 78 | 
| Conread position: | 227-619 | 
| Cow position: | chr3:68344335-68343975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 10 | 
| Conread position: | 230-604 | 
| Cow position: | chr3:2432661-2432298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 157, 73 | 
| Conread position: | 231-598 | 
| Cow position: | chr3:32768783-32769135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 160, 76 | 
| Conread position: | 231-664 | 
| Cow position: | chr3:73451321-73450895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 160, 72 | 
| Conread position: | 232-664 | 
| Cow position: | chr3:55245537-55245962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 159, 71 | 
| Conread position: | 236-630 | 
| Cow position: | chr3:3300633-3301024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 60 | 
| Conread position: | 236-664 | 
| Cow position: | chr3:45675780-45675359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 67 | 
| Conread position: | 237-664 | 
| Cow position: | chr3:59602800-59603220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 65 | 
| Conread position: | 239-664 | 
| Cow position: | chr3:37983364-37982947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 55 | 
| Conread position: | 241-634 | 
| Cow position: | chr3:56160814-56160438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 62 | 
| Conread position: | 248-656 | 
| Cow position: | chr3:62794067-62793675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 60 | 
| Conread position: | 249-651 | 
| Cow position: | chr3:52257504-52257122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 149, 54 | 
| Conread position: | 252-664 | 
| Cow position: | chr3:49416834-49416428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 51 | 
| Conread position: | 254-664 | 
| Cow position: | chr3:14438969-14438569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 181, 55 | 
| Conread position: | 255-525 | 
| Cow position: | chr3:36571158-36571415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 134, 46 | 
| Conread position: | 272-482 | 
| Cow position: | chr3:14558611-14558406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 9e-26 | 
| Alignm gaps (pig, cow): | 81, 31 | 
| Conread position: | 287-664 | 
| Cow position: | chr3:13248986-13248602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 153 | 
| Conread position: | 292-651 | 
| Cow position: | chr3:16869352-16869000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 89, 11 | 
| Conread position: | 292-664 | 
| Cow position: | chr3:75772094-75771716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 147 | 
| Conread position: | 303-637 | 
| Cow position: | chr3:23010411-23010745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 171, 41 | 
| Conread position: | 309-641 | 
| Cow position: | chr3:66977732-66978053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 82, 53 | 
| Conread position: | 310-551 | 
| Cow position: | chr3:63000312-63000078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 32, 83 | 
| Conread position: | 310-633 | 
| Cow position: | chr3:53518860-53519189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 15 | 
| Conread position: | 310-637 | 
| Cow position: | chr3:39214431-39214766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 81, 139 | 
| Conread position: | 310-660 | 
| Cow position: | chr3:73416056-73416414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 82, 130 | 
| Conread position: | 311-637 | 
| Cow position: | chr3:34015470-34015801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 129 | 
| Conread position: | 313-487 | 
| Cow position: | chr3:32325562-32325387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 9e-26 | 
| Alignm gaps (pig, cow): | 75, 125 | 
| Conread position: | 314-629 | 
| Cow position: | chr3:13117990-13117681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 91 | 
| Conread position: | 314-660 | 
| Cow position: | chr3:24275632-24275986 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 75, 124 | 
| Conread position: | 315-604 | 
| Cow position: | chr3:42602721-42603026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 73, 17 | 
| Conread position: | 318-664 | 
| Cow position: | chr3:2852170-2851827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 123 | 
| Conread position: | 319-432 | 
| Cow position: | chr3:6729713-6729598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 319-475 | 
| Cow position: | chr3:43263567-43263411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 72, 19 | 
| Conread position: | 319-508 | 
| Cow position: | chr3:32211217-32211025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 69, 120 | 
| Conread position: | 319-517 | 
| Cow position: | chr3:36402892-36403093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 70, 115 | 
| Conread position: | 319-582 | 
| Cow position: | chr3:10412314-10412581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 70, 111 | 
| Conread position: | 319-594 | 
| Cow position: | chr3:30333737-30334008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 70, 55 | 
| Conread position: | 319-625 | 
| Cow position: | chr3:30622941-30623252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 121 | 
| Conread position: | 319-625 | 
| Cow position: | chr3:31810370-31810676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 109, 40 | 
| Conread position: | 319-630 | 
| Cow position: | chr3:52726200-52725886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 134, 66 | 
| Conread position: | 319-630 | 
| Cow position: | chr3:64024964-64024648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 157 | 
| Conread position: | 319-649 | 
| Cow position: | chr3:6785385-6785720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 120 | 
| Conread position: | 319-656 | 
| Cow position: | chr3:15082866-15082533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 168, 71 | 
| Conread position: | 319-656 | 
| Cow position: | chr3:19718199-19717858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 119 | 
| Conread position: | 319-656 | 
| Cow position: | chr3:19795024-19794682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 121 | 
| Conread position: | 319-656 | 
| Cow position: | chr3:24443035-24442692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 111 | 
| Conread position: | 319-656 | 
| Cow position: | chr3:36862032-36861692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 82 | 
| Conread position: | 319-660 | 
| Cow position: | chr3:22352685-22353028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 111 | 
| Conread position: | 319-660 | 
| Cow position: | chr3:29311218-29311558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 132 | 
| Conread position: | 319-664 | 
| Cow position: | chr3:3885129-3884772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 72, 43 | 
| Conread position: | 319-664 | 
| Cow position: | chr3:12665205-12665556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 120 | 
| Conread position: | 319-664 | 
| Cow position: | chr3:26722744-26722393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 119 | 
| Conread position: | 319-664 | 
| Cow position: | chr3:26919798-26920137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 167, 42 | 
| Conread position: | 319-664 | 
| Cow position: | chr3:35109294-35109645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 120 | 
| Conread position: | 319-664 | 
| Cow position: | chr3:40004416-40004091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 320, 118 | 
| Conread position: | 319-664 | 
| Cow position: | chr3:42186537-42186887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 131 | 
| Conread position: | 320-651 | 
| Cow position: | chr3:42424425-42424096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 79 | 
| Conread position: | 320-664 | 
| Cow position: | chr3:5886955-5887302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 127 | 
| Conread position: | 320-664 | 
| Cow position: | chr3:59864551-59864898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 99 | 
| Conread position: | 321-621 | 
| Cow position: | chr3:63688840-63688538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 56 | 
| Conread position: | 322-649 | 
| Cow position: | chr3:69208162-69207840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 67, 98 | 
| Conread position: | 323-660 | 
| Cow position: | chr3:46752918-46753261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 119 | 
| Conread position: | 326-549 | 
| Cow position: | chr3:57996633-57996860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 65, 113 | 
| Conread position: | 326-634 | 
| Cow position: | chr3:55895030-55895338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 66, 113 | 
| Conread position: | 326-637 | 
| Cow position: | chr3:36416814-36417129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 113 | 
| Conread position: | 326-664 | 
| Cow position: | chr3:579249-579591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 113 | 
| Conread position: | 327-634 | 
| Cow position: | chr3:37486966-37486663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 160, 63 | 
| Conread position: | 328-659 | 
| Cow position: | chr3:74753184-74753512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 7, 62 | 
| Conread position: | 330-637 | 
| Cow position: | chr3:75997810-75997499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 118 | 
| Conread position: | 332-651 | 
| Cow position: | chr3:42500151-42500467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 59, 100 | 
| Conread position: | 333-637 | 
| Cow position: | chr3:173588-173894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 42 | 
| Conread position: | 333-637 | 
| Cow position: | chr3:12673293-12672989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 97 | 
| Conread position: | 333-651 | 
| Cow position: | chr3:52651855-52651549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 58, 20 | 
| Conread position: | 333-662 | 
| Cow position: | chr3:23217242-23216918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 306, 103 | 
| Conread position: | 334-637 | 
| Cow position: | chr3:34464450-34464753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 105 | 
| Conread position: | 340-634 | 
| Cow position: | chr3:600802-601091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 51, 72 | 
| Conread position: | 348-634 | 
| Cow position: | chr3:2117543-2117832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 90 | 
| Conread position: | 354-664 | 
| Cow position: | chr3:53787951-53788267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 85 | 
| Conread position: | 355-629 | 
| Cow position: | chr3:8391469-8391737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 37, 85 | 
| Conread position: | 360-659 | 
| Cow position: | chr3:44536879-44536559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 31, 79 | 
| Conread position: | 369-551 | 
| Cow position: | chr3:7481384-7481203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 8e-35 | 
| Alignm gaps (pig, cow): | 22, 80 | 
| Conread position: | 369-664 | 
| Cow position: | chr3:35056099-35056396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 51 | 
| Conread position: | 369-664 | 
| Cow position: | chr3:77366566-77366288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 22, 53 | 
| Conread position: | 370-637 | 
| Cow position: | chr3:64655329-64655594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 68 | 
| Conread position: | 371-664 | 
| Cow position: | chr3:69271721-69272020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 68 | 
| Conread position: | 372-637 | 
| Cow position: | chr3:15988060-15988329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 19, 68 | 
| Conread position: | 374-623 | 
| Cow position: | chr3:14279809-14280055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 66 | 
| Conread position: | 376-637 | 
| Cow position: | chr3:37599861-37600120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 48 | 
| Conread position: | 378-634 | 
| Cow position: | chr3:49429627-49429383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 9e-37 | 
| Alignm gaps (pig, cow): | 13, 52 | 
| Conread position: | 378-649 | 
| Cow position: | chr3:22235372-22235097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 25 | 
| Conread position: | 378-664 | 
| Cow position: | chr3:33254732-33254444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 41 | 
| Conread position: | 388-637 | 
| Cow position: | chr3:2798307-2798069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 210, 57 | 
| Conread position: | 388-656 | 
| Cow position: | chr3:24432520-24432792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 59 | 
| Conread position: | 390-532 | 
| Cow position: | chr3:2366425-2366281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 100, 47 | 
| Conread position: | 390-648 | 
| Cow position: | chr3:58766284-58766545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 102, 56 | 
| Conread position: | 390-656 | 
| Cow position: | chr3:29391981-29391711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 59 | 
| Conread position: | 390-660 | 
| Cow position: | chr3:14724260-14724529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 48 | 
| Conread position: | 394-664 | 
| Cow position: | chr3:51235347-51235085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 245, 41 | 
| Conread position: | 396-657 | 
| Cow position: | chr3:20781302-20781052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 411-664 | 
| Cow position: | chr3:76136480-76136740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 27 | 
| Conread position: | 413-629 | 
| Cow position: | chr3:16156684-16156904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 14, 18 | 
| Conread position: | 425-638 | 
| Cow position: | chr3:74391730-74391520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 431-635 | 
| Cow position: | chr3:39878996-39878791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 53, 16 | 
| Conread position: | 436-664 | 
| Cow position: | chr3:64293710-64293939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 9e-37 | 
| Alignm gaps (pig, cow): | 13, 81 | 
| Conread position: | 437-664 | 
| Cow position: | chr3:61538792-61539018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 206, 65 | 
| Conread position: | 441-664 | 
| Cow position: | chr3:45880932-45881156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 6, 63 | 
| Conread position: | 445-660 | 
| Cow position: | chr3:17864623-17864844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 447-648 | 
| Cow position: | chr3:77472792-77472590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 42, 64 | 
| Conread position: | 447-651 | 
| Cow position: | chr3:68043308-68043100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 42, 69 | 
| Conread position: | 447-655 | 
| Cow position: | chr3:73763434-73763220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 37, 67 | 
| Conread position: | 447-656 | 
| Cow position: | chr3:54876860-54877070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 45, 68 | 
| Conread position: | 452-651 | 
| Cow position: | chr3:73811277-73811482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 37, 7 | 
| Conread position: | 454-649 | 
| Cow position: | chr3:2507437-2507238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 28, 57 | 
| Conread position: | 461-628 | 
| Cow position: | chr3:4161245-4161081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 59, 42 | 
| Conread position: | 468-637 | 
| Cow position: | chr3:55454840-55454673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 468-660 | 
| Cow position: | chr3:11411825-11411634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 171, 10 | 
| Conread position: | 469-637 | 
| Cow position: | chr3:11961321-11961493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 14, 94 | 
| Conread position: | 470-641 | 
| Cow position: | chr3:37040512-37040684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 32, 43 | 
| Conread position: | 472-608 | 
| Cow position: | chr3:54766196-54766328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 472-660 | 
| Cow position: | chr3:80564017-80564214 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 480-649 | 
| Cow position: | chr3:9639779-9639610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 159, 30 | 
| Conread position: | 480-664 | 
| Cow position: | chr3:60891491-60891682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 14, 36 | 
| Conread position: | 483-649 | 
| Cow position: | chr3:3061264-3061429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 127, 0 | 
| Conread position: | 484-630 | 
| Cow position: | chr3:48599776-48599920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 491-631 | 
| Cow position: | chr3:14633999-14633858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 507-664 | 
| Cow position: | chr3:66623446-66623605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 132, 0 | 
| Conread position: | 511-664 | 
| Cow position: | chr3:32403199-32403354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 128, 0 | 
| Conread position: | 518-664 | 
| Cow position: | chr3:45699936-45700084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 119, 0 | 
Show alignments to all cow chromosomes.
