Cow genome map

Conread name: Pig4-TMW8006O17

Conread position: 1-301
Cow position: chr3:63000601-63000295 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-314
Cow position: chr3:6875515-6875198 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 18

Conread position: 1-389
Cow position: chr3:77706583-77706963 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 262

Conread position: 1-419
Cow position: chr3:59332214-59332628 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 144

Conread position: 1-476
Cow position: chr3:45567968-45568457 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 162

Conread position: 1-485
Cow position: chr3:14054030-14054507 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-487
Cow position: chr3:32620284-32619809 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 284

Conread position: 1-487
Cow position: chr3:66622970-66623448 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 214

Conread position: 1-508
Cow position: chr3:19798395-19797890 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-532
Cow position: chr3:58034888-58034359 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 316

Conread position: 1-549
Cow position: chr3:40285559-40285017 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 312

Conread position: 1-549
Cow position: chr3:57554529-57555071 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 117

Conread position: 1-551
Cow position: chr3:22338665-22339210 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-551
Cow position: chr3:37280152-37280699 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-571
Cow position: chr3:1033619-1034186 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-572
Cow position: chr3:63239256-63238711 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 117

Conread position: 1-574
Cow position: chr3:31121386-31120810 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 314

Conread position: 1-574
Cow position: chr3:56337197-56336651 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 162

Conread position: 1-581
Cow position: chr3:74850386-74849813 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 19

Conread position: 1-586
Cow position: chr3:58103344-58103922 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 375
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 24, 134

Conread position: 1-613
Cow position: chr3:22725012-22724405 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 119

Conread position: 1-619
Cow position: chr3:31418293-31418906 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 145

Conread position: 1-625
Cow position: chr3:49463796-49463173 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 268

Conread position: 1-630
Cow position: chr3:30321019-30321639 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 50

Conread position: 1-630
Cow position: chr3:38496532-38497176 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 109

Conread position: 1-631
Cow position: chr3:18353599-18352985 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 79

Conread position: 1-631
Cow position: chr3:24263070-24262463 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 63

Conread position: 1-631
Cow position: chr3:82931392-82932003 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 161

Conread position: 1-633
Cow position: chr3:68870993-68870364 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-635
Cow position: chr3:15416223-15416854 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr3:1740115-1739483 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 33

Conread position: 1-637
Cow position: chr3:2866898-2866265 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr3:6864424-6865048 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 183

Conread position: 1-637
Cow position: chr3:15656530-15655926 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 135

Conread position: 1-637
Cow position: chr3:16294153-16293527 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 81

Conread position: 1-637
Cow position: chr3:19883227-19883848 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 162

Conread position: 1-637
Cow position: chr3:20379960-20379329 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr3:26743114-26742483 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 134

Conread position: 1-637
Cow position: chr3:32490956-32490323 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr3:34504366-34503746 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 308

Conread position: 1-637
Cow position: chr3:43525982-43525350 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr3:46505525-46506158 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr3:50204302-50204954 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 328

Conread position: 1-637
Cow position: chr3:53880510-53879877 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr3:56297141-56297774 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr3:56485503-56484865 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr3:68717950-68717321 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 14

Conread position: 1-637
Cow position: chr3:83767010-83767635 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-638
Cow position: chr3:27245930-27245303 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 241

Conread position: 1-638
Cow position: chr3:49611451-49610820 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-640
Cow position: chr3:64170987-64171632 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 117

Conread position: 1-641
Cow position: chr3:25689412-25690039 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-649
Cow position: chr3:227116-226489 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 161

Conread position: 1-649
Cow position: chr3:24638168-24638807 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 66

Conread position: 1-649
Cow position: chr3:53048026-53047392 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 151

Conread position: 1-649
Cow position: chr3:64697586-64698201 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 160

Conread position: 1-650
Cow position: chr3:19108323-19108960 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 230

Conread position: 1-651
Cow position: chr3:43190513-43189867 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-651
Cow position: chr3:50346581-50347213 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 82

Conread position: 1-652
Cow position: chr3:26533237-26532601 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 132

Conread position: 1-654
Cow position: chr3:14467121-14466454 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 133

Conread position: 1-659
Cow position: chr3:23170437-23169813 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 241

Conread position: 1-660
Cow position: chr3:7246347-7245691 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-660
Cow position: chr3:13276520-13275863 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 88

Conread position: 1-660
Cow position: chr3:24264959-24265613 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 294

Conread position: 1-660
Cow position: chr3:31934576-31933923 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 134

Conread position: 1-660
Cow position: chr3:35611911-35612562 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-660
Cow position: chr3:56645573-56644916 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 133

Conread position: 1-660
Cow position: chr3:61173254-61173906 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 305

Conread position: 1-660
Cow position: chr3:75039085-75038427 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-660
Cow position: chr3:78024673-78024025 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 279

Conread position: 1-660
Cow position: chr3:81100843-81101493 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 50

Conread position: 1-661
Cow position: chr3:3653527-3652886 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 127

Conread position: 1-663
Cow position: chr3:66888439-66887780 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr3:596877-597526 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 185

Conread position: 1-664
Cow position: chr3:2708112-2707456 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr3:6688570-6689248 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 305

Conread position: 1-664
Cow position: chr3:7477164-7476501 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr3:10243418-10244078 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr3:13723955-13723293 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 8

Conread position: 1-664
Cow position: chr3:16225638-16226293 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 304

Conread position: 1-664
Cow position: chr3:18814263-18814924 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr3:18862198-18862859 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 197

Conread position: 1-664
Cow position: chr3:19753971-19753316 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-664
Cow position: chr3:19941651-19942301 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 305

Conread position: 1-664
Cow position: chr3:21179499-21178838 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 99

Conread position: 1-664
Cow position: chr3:21593041-21593701 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr3:23204916-23204258 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 212

Conread position: 1-664
Cow position: chr3:24573401-24572750 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 261

Conread position: 1-664
Cow position: chr3:31021440-31022098 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 125

Conread position: 1-664
Cow position: chr3:31396155-31396786 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 76

Conread position: 1-664
Cow position: chr3:36875310-36874642 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 314

Conread position: 1-664
Cow position: chr3:38095657-38096319 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr3:38869331-38869984 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 76

Conread position: 1-664
Cow position: chr3:40048646-40049307 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr3:40337386-40336727 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 240

Conread position: 1-664
Cow position: chr3:40826154-40826815 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-664
Cow position: chr3:45977259-45977918 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr3:46858526-46857865 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 268

Conread position: 1-664
Cow position: chr3:48603008-48603680 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 308

Conread position: 1-664
Cow position: chr3:49542444-49541789 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr3:49563767-49564435 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr3:49605682-49605024 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 248

Conread position: 1-664
Cow position: chr3:49998895-49999554 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 162

Conread position: 1-664
Cow position: chr3:56102503-56103158 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 56

Conread position: 1-664
Cow position: chr3:56148047-56148714 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 165

Conread position: 1-664
Cow position: chr3:57742279-57742930 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 74

Conread position: 1-664
Cow position: chr3:61677302-61677955 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 97

Conread position: 1-664
Cow position: chr3:65988676-65989328 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 150

Conread position: 1-664
Cow position: chr3:66969123-66968461 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 313

Conread position: 1-664
Cow position: chr3:68889814-68889154 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 307

Conread position: 1-664
Cow position: chr3:69931077-69930418 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 308

Conread position: 1-664
Cow position: chr3:74060231-74060887 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 136

Conread position: 1-664
Cow position: chr3:76001198-76000540 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 234

Conread position: 1-664
Cow position: chr3:76864188-76864850 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 308

Conread position: 2-381
Cow position: chr3:29644116-29644494 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 157

Conread position: 2-519
Cow position: chr3:6713767-6714280 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 89

Conread position: 2-535
Cow position: chr3:33692269-33691762 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 36

Conread position: 2-585
Cow position: chr3:21004573-21005154 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 285

Conread position: 2-653
Cow position: chr3:27091406-27090787 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 423
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 23, 37

Conread position: 2-654
Cow position: chr3:24586470-24585825 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 140

Conread position: 2-660
Cow position: chr3:26992886-26993539 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 265

Conread position: 2-660
Cow position: chr3:57455728-57456359 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 98

Conread position: 2-662
Cow position: chr3:37971802-37972445 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 88

Conread position: 2-664
Cow position: chr3:77426461-77427091 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 110

Conread position: 3-631
Cow position: chr3:12253807-12254424 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 212

Conread position: 3-633
Cow position: chr3:48240015-48240637 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 41

Conread position: 3-635
Cow position: chr3:36171172-36170559 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 203

Conread position: 3-637
Cow position: chr3:27783540-27782941 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 184

Conread position: 3-637
Cow position: chr3:45185223-45184598 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 136

Conread position: 3-649
Cow position: chr3:17057299-17056667 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 180

Conread position: 3-651
Cow position: chr3:56719566-56718928 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 212

Conread position: 3-658
Cow position: chr3:56101035-56101663 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 137

Conread position: 3-664
Cow position: chr3:23287576-23286918 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 305

Conread position: 3-664
Cow position: chr3:30616178-30615522 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 306

Conread position: 3-664
Cow position: chr3:44926574-44927232 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 3-664
Cow position: chr3:57481977-57481327 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 132

Conread position: 3-664
Cow position: chr3:58950222-58950877 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 74

Conread position: 3-664
Cow position: chr3:72632829-72633491 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 309

Conread position: 5-502
Cow position: chr3:3060623-3061102 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 128

Conread position: 5-630
Cow position: chr3:68697204-68696583 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 304

Conread position: 5-637
Cow position: chr3:29574365-29573738 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 304

Conread position: 5-650
Cow position: chr3:63736150-63736794 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 217

Conread position: 5-664
Cow position: chr3:64653430-64654087 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 252

Conread position: 6-651
Cow position: chr3:54654419-54653767 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 237

Conread position: 7-618
Cow position: chr3:38251614-38252201 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 60

Conread position: 7-664
Cow position: chr3:47078851-47078194 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 300

Conread position: 8-664
Cow position: chr3:2366126-2365491 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 133

Conread position: 8-664
Cow position: chr3:5951852-5951205 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 301

Conread position: 9-485
Cow position: chr3:61277340-61277801 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 42

Conread position: 9-654
Cow position: chr3:31748424-31749084 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 96

Conread position: 10-651
Cow position: chr3:75165324-75164672 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 249

Conread position: 10-655
Cow position: chr3:60178325-60177695 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 118

Conread position: 11-664
Cow position: chr3:49908249-49907614 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 105

Conread position: 12-664
Cow position: chr3:37893601-37894250 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 239

Conread position: 15-651
Cow position: chr3:46014904-46014280 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 43

Conread position: 19-664
Cow position: chr3:7856200-7856840 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 291

Conread position: 21-637
Cow position: chr3:42977806-42977203 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 287

Conread position: 26-634
Cow position: chr3:48096297-48095717 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 138

Conread position: 26-664
Cow position: chr3:5474324-5474958 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 280

Conread position: 37-291
Cow position: chr3:23941637-23941385 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 83

Conread position: 37-467
Cow position: chr3:5446114-5445700 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 267

Conread position: 37-501
Cow position: chr3:2921059-2921512 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 115

Conread position: 37-614
Cow position: chr3:68510538-68509972 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 267

Conread position: 37-619
Cow position: chr3:54087573-54087004 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 254

Conread position: 37-631
Cow position: chr3:12676830-12676256 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 107

Conread position: 37-637
Cow position: chr3:64376910-64376326 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 200

Conread position: 37-649
Cow position: chr3:4030553-4031145 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 201

Conread position: 37-651
Cow position: chr3:17938203-17937612 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 420, 266

Conread position: 37-660
Cow position: chr3:2904641-2904042 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 158

Conread position: 37-664
Cow position: chr3:18886264-18886876 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 155

Conread position: 37-664
Cow position: chr3:19880849-19881468 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 97

Conread position: 37-664
Cow position: chr3:37627694-37628301 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 148

Conread position: 37-664
Cow position: chr3:40102048-40101441 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 34

Conread position: 38-651
Cow position: chr3:50461151-50461715 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 512, 119

Conread position: 38-664
Cow position: chr3:66830140-66829530 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 48

Conread position: 42-654
Cow position: chr3:6896646-6897236 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 15

Conread position: 42-664
Cow position: chr3:3552128-3552734 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 203

Conread position: 45-301
Cow position: chr3:2852674-2852411 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 246

Conread position: 46-630
Cow position: chr3:2790559-2791131 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 257

Conread position: 46-664
Cow position: chr3:64875594-64876191 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 76

Conread position: 47-654
Cow position: chr3:19831344-19830750 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 155

Conread position: 49-649
Cow position: chr3:28435888-28435295 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 254

Conread position: 49-664
Cow position: chr3:2834728-2834120 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 254

Conread position: 50-629
Cow position: chr3:35342462-35343032 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 253

Conread position: 55-626
Cow position: chr3:76187349-76187917 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 225

Conread position: 58-637
Cow position: chr3:14679907-14680477 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 245

Conread position: 58-637
Cow position: chr3:20795113-20795683 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 245

Conread position: 58-664
Cow position: chr3:7155987-7155388 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 245

Conread position: 65-586
Cow position: chr3:7354394-7354912 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 323
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 55, 175

Conread position: 67-581
Cow position: chr3:77726303-77726784 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 84

Conread position: 68-404
Cow position: chr3:52451249-52451570 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 198, 48

Conread position: 68-648
Cow position: chr3:15663607-15663048 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 105

Conread position: 71-630
Cow position: chr3:63148803-63148258 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 411, 66

Conread position: 71-634
Cow position: chr3:55373923-55374462 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 88

Conread position: 71-664
Cow position: chr3:6528825-6529411 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 232

Conread position: 71-664
Cow position: chr3:47273047-47272460 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 232

Conread position: 72-598
Cow position: chr3:43084076-43084590 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 231

Conread position: 72-656
Cow position: chr3:42994037-42993464 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 149

Conread position: 72-664
Cow position: chr3:823257-822671 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 232

Conread position: 74-399
Cow position: chr3:37349312-37349005 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 74-651
Cow position: chr3:35885278-35884717 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 11

Conread position: 74-664
Cow position: chr3:42846189-42846762 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 415, 145

Conread position: 77-583
Cow position: chr3:24530541-24531032 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 207

Conread position: 78-664
Cow position: chr3:72175463-72174887 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 114

Conread position: 79-631
Cow position: chr3:77225576-77226105 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 164

Conread position: 80-637
Cow position: chr3:49134693-49134147 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 12

Conread position: 81-637
Cow position: chr3:33269081-33269613 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 138

Conread position: 81-637
Cow position: chr3:64317583-64318127 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 153

Conread position: 81-664
Cow position: chr3:2572370-2572946 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 222

Conread position: 83-652
Cow position: chr3:82363635-82364182 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 70

Conread position: 84-637
Cow position: chr3:47690843-47691362 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 357
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 307, 126

Conread position: 85-664
Cow position: chr3:73636728-73637298 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 218

Conread position: 86-629
Cow position: chr3:3983960-3984491 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 97

Conread position: 87-581
Cow position: chr3:32204824-32204332 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 317
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 177, 42

Conread position: 87-664
Cow position: chr3:52150437-52149867 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 216

Conread position: 87-664
Cow position: chr3:72669713-72669141 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 216

Conread position: 91-664
Cow position: chr3:6837882-6838448 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 212

Conread position: 95-651
Cow position: chr3:12749757-12750302 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 208

Conread position: 101-651
Cow position: chr3:70914403-70913865 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 205

Conread position: 102-649
Cow position: chr3:27547582-27547035 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 53

Conread position: 102-660
Cow position: chr3:45311657-45312190 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 13

Conread position: 105-485
Cow position: chr3:83700453-83700083 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 49

Conread position: 105-649
Cow position: chr3:15570311-15570832 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 48

Conread position: 116-660
Cow position: chr3:40521062-40520525 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 187

Conread position: 117-624
Cow position: chr3:30938379-30938875 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 72

Conread position: 120-367
Cow position: chr3:5946407-5946169 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 116, 44

Conread position: 122-664
Cow position: chr3:65473314-65473845 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 181

Conread position: 126-532
Cow position: chr3:34027987-34027590 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 177

Conread position: 126-664
Cow position: chr3:84198687-84199191 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 27

Conread position: 129-631
Cow position: chr3:41582283-41582771 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 330
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 56, 101

Conread position: 132-656
Cow position: chr3:79979294-79978780 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 341
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 108, 13

Conread position: 135-405
Cow position: chr3:44504649-44504390 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 25, 12

Conread position: 135-664
Cow position: chr3:11417443-11417965 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 168

Conread position: 137-563
Cow position: chr3:39856362-39856779 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 166

Conread position: 137-664
Cow position: chr3:13312107-13311583 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 166

Conread position: 138-502
Cow position: chr3:13115536-13115187 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 52

Conread position: 141-664
Cow position: chr3:13035593-13035077 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 162

Conread position: 144-492
Cow position: chr3:54777840-54778176 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 232
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 247, 37

Conread position: 144-631
Cow position: chr3:11384222-11384696 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 161

Conread position: 144-664
Cow position: chr3:78519953-78520466 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 159

Conread position: 151-532
Cow position: chr3:6854705-6854342 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 51

Conread position: 153-637
Cow position: chr3:68273755-68274230 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 150

Conread position: 154-459
Cow position: chr3:48527473-48527768 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 23, 156

Conread position: 154-634
Cow position: chr3:45615252-45615714 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 126

Conread position: 154-651
Cow position: chr3:48272695-48273184 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 144

Conread position: 158-660
Cow position: chr3:56696768-56697252 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 145

Conread position: 159-630
Cow position: chr3:34116443-34115981 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 54

Conread position: 159-656
Cow position: chr3:31224200-31224685 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 125

Conread position: 163-664
Cow position: chr3:302156-302640 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 140

Conread position: 164-664
Cow position: chr3:20475439-20475926 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 140

Conread position: 166-648
Cow position: chr3:34557441-34556975 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 13

Conread position: 167-664
Cow position: chr3:41019385-41018892 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 136

Conread position: 170-637
Cow position: chr3:25056621-25057070 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 120

Conread position: 175-649
Cow position: chr3:54680909-54680445 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 311
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 90, 82

Conread position: 177-637
Cow position: chr3:4039992-4039540 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 58

Conread position: 179-492
Cow position: chr3:37021467-37021169 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 97

Conread position: 179-662
Cow position: chr3:27454992-27454521 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 124

Conread position: 180-664
Cow position: chr3:19215857-19216319 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 124

Conread position: 181-651
Cow position: chr3:6442012-6442474 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 54

Conread position: 182-387
Cow position: chr3:11782003-11781811 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 182-664
Cow position: chr3:47986385-47986858 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 63

Conread position: 183-614
Cow position: chr3:30908752-30909183 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 53

Conread position: 183-664
Cow position: chr3:49930780-49931254 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 120

Conread position: 184-443
Cow position: chr3:4161791-4161532 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 131, 119

Conread position: 184-623
Cow position: chr3:57968090-57968513 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 284
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 209, 92

Conread position: 184-664
Cow position: chr3:36121121-36121594 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 119

Conread position: 184-664
Cow position: chr3:36671675-36671199 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 119

Conread position: 184-664
Cow position: chr3:65084880-65085352 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 119

Conread position: 185-664
Cow position: chr3:35918511-35918978 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 118

Conread position: 187-509
Cow position: chr3:46899727-46900033 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 239
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 202, 114

Conread position: 187-664
Cow position: chr3:14863833-14864301 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 27

Conread position: 194-425
Cow position: chr3:2508372-2508152 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 61, 111

Conread position: 194-649
Cow position: chr3:49732839-49732396 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 109

Conread position: 195-664
Cow position: chr3:2074740-2075199 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 68

Conread position: 195-664
Cow position: chr3:60185226-60184749 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 108

Conread position: 196-664
Cow position: chr3:42508251-42507795 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 107

Conread position: 197-649
Cow position: chr3:23497799-23497356 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 110

Conread position: 201-563
Cow position: chr3:32412523-32412170 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 102

Conread position: 201-637
Cow position: chr3:14212353-14212780 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 102

Conread position: 201-664
Cow position: chr3:21000126-20999653 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 102

Conread position: 202-637
Cow position: chr3:35619521-35619942 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 101

Conread position: 204-664
Cow position: chr3:49387618-49388068 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 34

Conread position: 205-660
Cow position: chr3:3031218-3031649 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 70

Conread position: 212-650
Cow position: chr3:54863648-54863217 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 66

Conread position: 212-664
Cow position: chr3:31423153-31422703 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 91

Conread position: 213-431
Cow position: chr3:45237515-45237310 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 175
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 178, 90

Conread position: 214-615
Cow position: chr3:35854608-35854202 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 279
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 177, 89

Conread position: 214-661
Cow position: chr3:12667680-12668115 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 90

Conread position: 214-664
Cow position: chr3:30351251-30351694 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 89

Conread position: 221-664
Cow position: chr3:79668087-79668529 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 85

Conread position: 223-481
Cow position: chr3:53674236-53673990 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 168, 80

Conread position: 223-651
Cow position: chr3:16114389-16114812 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 290
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 79

Conread position: 223-656
Cow position: chr3:33125270-33124844 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 80

Conread position: 224-574
Cow position: chr3:4191951-4191610 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 79

Conread position: 224-592
Cow position: chr3:69962868-69962501 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 64

Conread position: 225-487
Cow position: chr3:45947829-45947586 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 166, 78

Conread position: 227-619
Cow position: chr3:68344335-68343975 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 10

Conread position: 230-604
Cow position: chr3:2432661-2432298 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 73

Conread position: 231-598
Cow position: chr3:32768783-32769135 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 76

Conread position: 231-664
Cow position: chr3:73451321-73450895 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 72

Conread position: 232-664
Cow position: chr3:55245537-55245962 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 71

Conread position: 236-630
Cow position: chr3:3300633-3301024 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 60

Conread position: 236-664
Cow position: chr3:45675780-45675359 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 67

Conread position: 237-664
Cow position: chr3:59602800-59603220 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 65

Conread position: 239-664
Cow position: chr3:37983364-37982947 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 241-634
Cow position: chr3:56160814-56160438 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 62

Conread position: 248-656
Cow position: chr3:62794067-62793675 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 60

Conread position: 249-651
Cow position: chr3:52257504-52257122 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 54

Conread position: 252-664
Cow position: chr3:49416834-49416428 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 51

Conread position: 254-664
Cow position: chr3:14438969-14438569 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 55

Conread position: 255-525
Cow position: chr3:36571158-36571415 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 134, 46

Conread position: 272-482
Cow position: chr3:14558611-14558406 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 81, 31

Conread position: 287-664
Cow position: chr3:13248986-13248602 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 153

Conread position: 292-651
Cow position: chr3:16869352-16869000 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 231
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 11

Conread position: 292-664
Cow position: chr3:75772094-75771716 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 147

Conread position: 303-637
Cow position: chr3:23010411-23010745 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 41

Conread position: 309-641
Cow position: chr3:66977732-66978053 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 82, 53

Conread position: 310-551
Cow position: chr3:63000312-63000078 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 83

Conread position: 310-633
Cow position: chr3:53518860-53519189 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 15

Conread position: 310-637
Cow position: chr3:39214431-39214766 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 227
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 81, 139

Conread position: 310-660
Cow position: chr3:73416056-73416414 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 82, 130

Conread position: 311-637
Cow position: chr3:34015470-34015801 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 129

Conread position: 313-487
Cow position: chr3:32325562-32325387 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 75, 125

Conread position: 314-629
Cow position: chr3:13117990-13117681 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 91

Conread position: 314-660
Cow position: chr3:24275632-24275986 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 243
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 75, 124

Conread position: 315-604
Cow position: chr3:42602721-42603026 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 73, 17

Conread position: 318-664
Cow position: chr3:2852170-2851827 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 123

Conread position: 319-432
Cow position: chr3:6729713-6729598 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 319-475
Cow position: chr3:43263567-43263411 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 72, 19

Conread position: 319-508
Cow position: chr3:32211217-32211025 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 69, 120

Conread position: 319-517
Cow position: chr3:36402892-36403093 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 70, 115

Conread position: 319-582
Cow position: chr3:10412314-10412581 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 70, 111

Conread position: 319-594
Cow position: chr3:30333737-30334008 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 70, 55

Conread position: 319-625
Cow position: chr3:30622941-30623252 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 121

Conread position: 319-625
Cow position: chr3:31810370-31810676 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 205
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 109, 40

Conread position: 319-630
Cow position: chr3:52726200-52725886 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 212
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 134, 66

Conread position: 319-630
Cow position: chr3:64024964-64024648 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 157

Conread position: 319-649
Cow position: chr3:6785385-6785720 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-656
Cow position: chr3:15082866-15082533 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 71

Conread position: 319-656
Cow position: chr3:19718199-19717858 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 119

Conread position: 319-656
Cow position: chr3:19795024-19794682 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 121

Conread position: 319-656
Cow position: chr3:24443035-24442692 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 111

Conread position: 319-656
Cow position: chr3:36862032-36861692 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 82

Conread position: 319-660
Cow position: chr3:22352685-22353028 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 111

Conread position: 319-660
Cow position: chr3:29311218-29311558 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 132

Conread position: 319-664
Cow position: chr3:3885129-3884772 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 72, 43

Conread position: 319-664
Cow position: chr3:12665205-12665556 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-664
Cow position: chr3:26722744-26722393 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 119

Conread position: 319-664
Cow position: chr3:26919798-26920137 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 167, 42

Conread position: 319-664
Cow position: chr3:35109294-35109645 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-664
Cow position: chr3:40004416-40004091 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 118

Conread position: 319-664
Cow position: chr3:42186537-42186887 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 131

Conread position: 320-651
Cow position: chr3:42424425-42424096 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 79

Conread position: 320-664
Cow position: chr3:5886955-5887302 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 127

Conread position: 320-664
Cow position: chr3:59864551-59864898 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 99

Conread position: 321-621
Cow position: chr3:63688840-63688538 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 56

Conread position: 322-649
Cow position: chr3:69208162-69207840 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 211
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 67, 98

Conread position: 323-660
Cow position: chr3:46752918-46753261 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 119

Conread position: 326-549
Cow position: chr3:57996633-57996860 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 65, 113

Conread position: 326-634
Cow position: chr3:55895030-55895338 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 203
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 66, 113

Conread position: 326-637
Cow position: chr3:36416814-36417129 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 113

Conread position: 326-664
Cow position: chr3:579249-579591 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 113

Conread position: 327-634
Cow position: chr3:37486966-37486663 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 160, 63

Conread position: 328-659
Cow position: chr3:74753184-74753512 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 210
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 62

Conread position: 330-637
Cow position: chr3:75997810-75997499 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 118

Conread position: 332-651
Cow position: chr3:42500151-42500467 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 59, 100

Conread position: 333-637
Cow position: chr3:173588-173894 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 42

Conread position: 333-637
Cow position: chr3:12673293-12672989 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 97

Conread position: 333-651
Cow position: chr3:52651855-52651549 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 58, 20

Conread position: 333-662
Cow position: chr3:23217242-23216918 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 103

Conread position: 334-637
Cow position: chr3:34464450-34464753 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 105

Conread position: 340-634
Cow position: chr3:600802-601091 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 195
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 72

Conread position: 348-634
Cow position: chr3:2117543-2117832 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 90

Conread position: 354-664
Cow position: chr3:53787951-53788267 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 85

Conread position: 355-629
Cow position: chr3:8391469-8391737 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 37, 85

Conread position: 360-659
Cow position: chr3:44536879-44536559 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 31, 79

Conread position: 369-551
Cow position: chr3:7481384-7481203 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 22, 80

Conread position: 369-664
Cow position: chr3:35056099-35056396 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 51

Conread position: 369-664
Cow position: chr3:77366566-77366288 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 53

Conread position: 370-637
Cow position: chr3:64655329-64655594 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 68

Conread position: 371-664
Cow position: chr3:69271721-69272020 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 68

Conread position: 372-637
Cow position: chr3:15988060-15988329 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 19, 68

Conread position: 374-623
Cow position: chr3:14279809-14280055 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 66

Conread position: 376-637
Cow position: chr3:37599861-37600120 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 48

Conread position: 378-634
Cow position: chr3:49429627-49429383 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 13, 52

Conread position: 378-649
Cow position: chr3:22235372-22235097 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 25

Conread position: 378-664
Cow position: chr3:33254732-33254444 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 41

Conread position: 388-637
Cow position: chr3:2798307-2798069 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 210, 57

Conread position: 388-656
Cow position: chr3:24432520-24432792 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 59

Conread position: 390-532
Cow position: chr3:2366425-2366281 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 100, 47

Conread position: 390-648
Cow position: chr3:58766284-58766545 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 102, 56

Conread position: 390-656
Cow position: chr3:29391981-29391711 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 59

Conread position: 390-660
Cow position: chr3:14724260-14724529 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 48

Conread position: 394-664
Cow position: chr3:51235347-51235085 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 41

Conread position: 396-657
Cow position: chr3:20781302-20781052 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 411-664
Cow position: chr3:76136480-76136740 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 27

Conread position: 413-629
Cow position: chr3:16156684-16156904 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 14, 18

Conread position: 425-638
Cow position: chr3:74391730-74391520 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 431-635
Cow position: chr3:39878996-39878791 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 16

Conread position: 436-664
Cow position: chr3:64293710-64293939 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 13, 81

Conread position: 437-664
Cow position: chr3:61538792-61539018 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 206, 65

Conread position: 441-664
Cow position: chr3:45880932-45881156 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 63

Conread position: 445-660
Cow position: chr3:17864623-17864844 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 43, 0

Conread position: 447-648
Cow position: chr3:77472792-77472590 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 42, 64

Conread position: 447-651
Cow position: chr3:68043308-68043100 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 42, 69

Conread position: 447-655
Cow position: chr3:73763434-73763220 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 37, 67

Conread position: 447-656
Cow position: chr3:54876860-54877070 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 68

Conread position: 452-651
Cow position: chr3:73811277-73811482 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 37, 7

Conread position: 454-649
Cow position: chr3:2507437-2507238 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 28, 57

Conread position: 461-628
Cow position: chr3:4161245-4161081 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 42

Conread position: 468-637
Cow position: chr3:55454840-55454673 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 468-660
Cow position: chr3:11411825-11411634 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 171, 10

Conread position: 469-637
Cow position: chr3:11961321-11961493 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 14, 94

Conread position: 470-641
Cow position: chr3:37040512-37040684 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 32, 43

Conread position: 472-608
Cow position: chr3:54766196-54766328 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 472-660
Cow position: chr3:80564017-80564214 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 480-649
Cow position: chr3:9639779-9639610 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 159, 30

Conread position: 480-664
Cow position: chr3:60891491-60891682 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 36

Conread position: 483-649
Cow position: chr3:3061264-3061429 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 484-630
Cow position: chr3:48599776-48599920 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 491-631
Cow position: chr3:14633999-14633858 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 507-664
Cow position: chr3:66623446-66623605 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 132, 0

Conread position: 511-664
Cow position: chr3:32403199-32403354 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 128, 0

Conread position: 518-664
Cow position: chr3:45699936-45700084 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 119, 0

Show alignments to all cow chromosomes.