Cow genome map

Conread name: Pig4-TMW8006O17

Conread position: 1-176
Cow position: chr6:24624595-24624411 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 1-186
Cow position: chr6:39435115-39434935 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 148

Conread position: 1-301
Cow position: chr6:6159459-6159763 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 165

Conread position: 1-318
Cow position: chr6:31010007-31009685 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 302

Conread position: 1-426
Cow position: chr6:48771-48351 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 308

Conread position: 1-426
Cow position: chr6:43790777-43790355 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 300

Conread position: 1-435
Cow position: chr6:49826451-49826022 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 308

Conread position: 1-458
Cow position: chr6:48875530-48875088 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 171

Conread position: 1-487
Cow position: chr6:365692-366171 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 125

Conread position: 1-487
Cow position: chr6:28488767-28488297 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 190

Conread position: 1-487
Cow position: chr6:38873857-38873380 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 106

Conread position: 1-506
Cow position: chr6:20351288-20350785 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-509
Cow position: chr6:45724344-45723840 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-513
Cow position: chr6:41408207-41408715 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 307

Conread position: 1-532
Cow position: chr6:33490253-33489725 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-556
Cow position: chr6:1507709-1507157 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-556
Cow position: chr6:66188999-66188447 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-561
Cow position: chr6:11168308-11168864 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 76

Conread position: 1-569
Cow position: chr6:27151639-27151075 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 95

Conread position: 1-574
Cow position: chr6:11354362-11353802 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 1-584
Cow position: chr6:7940985-7940406 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 384
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 24, 83

Conread position: 1-592
Cow position: chr6:30270102-30269513 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-592
Cow position: chr6:51867796-51868376 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-608
Cow position: chr6:14851945-14851345 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 138

Conread position: 1-622
Cow position: chr6:41192124-41192744 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 311

Conread position: 1-628
Cow position: chr6:65049853-65049261 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 216

Conread position: 1-629
Cow position: chr6:33950348-33949734 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 159

Conread position: 1-629
Cow position: chr6:36230725-36230100 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-631
Cow position: chr6:2367431-2366838 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 1-631
Cow position: chr6:43798111-43797470 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 313

Conread position: 1-637
Cow position: chr6:6720783-6721406 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 123

Conread position: 1-637
Cow position: chr6:10236002-10236626 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 129

Conread position: 1-637
Cow position: chr6:12663514-12662888 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr6:15276438-15275806 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 195

Conread position: 1-637
Cow position: chr6:19713433-19712811 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr6:28185529-28184886 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 307

Conread position: 1-637
Cow position: chr6:33465764-33466391 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 208

Conread position: 1-637
Cow position: chr6:43620532-43621165 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr6:53543677-53543049 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 106

Conread position: 1-637
Cow position: chr6:60378964-60379597 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr6:61829030-61829663 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-638
Cow position: chr6:9734162-9733556 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 146

Conread position: 1-640
Cow position: chr6:6120178-6119558 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 145

Conread position: 1-640
Cow position: chr6:59596063-59596682 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 134

Conread position: 1-649
Cow position: chr6:12351629-12352282 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 336

Conread position: 1-649
Cow position: chr6:16767035-16766394 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 76

Conread position: 1-649
Cow position: chr6:34074664-34075320 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 111

Conread position: 1-650
Cow position: chr6:28171705-28172352 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 315

Conread position: 1-651
Cow position: chr6:9840329-9839686 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 309

Conread position: 1-651
Cow position: chr6:40864231-40863582 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 311

Conread position: 1-652
Cow position: chr6:50637091-50637716 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 107

Conread position: 1-654
Cow position: chr6:53935831-53935186 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 277

Conread position: 1-656
Cow position: chr6:478352-479005 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 75

Conread position: 1-656
Cow position: chr6:916844-917513 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-656
Cow position: chr6:9738456-9737801 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 305

Conread position: 1-656
Cow position: chr6:40974987-40975623 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 308

Conread position: 1-656
Cow position: chr6:41231288-41231942 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 309

Conread position: 1-656
Cow position: chr6:42266540-42267176 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 310

Conread position: 1-656
Cow position: chr6:65875480-65874829 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 50

Conread position: 1-658
Cow position: chr6:64719122-64719773 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 305

Conread position: 1-659
Cow position: chr6:41676736-41677387 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 112

Conread position: 1-660
Cow position: chr6:11870130-11869477 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 85

Conread position: 1-660
Cow position: chr6:14928260-14928910 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-660
Cow position: chr6:51149743-51150401 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 308

Conread position: 1-661
Cow position: chr6:59618870-59619536 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 300

Conread position: 1-662
Cow position: chr6:34843911-34843255 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 307

Conread position: 1-663
Cow position: chr6:3272679-3272020 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 203

Conread position: 1-663
Cow position: chr6:36531085-36531736 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 183

Conread position: 1-664
Cow position: chr6:127331-126672 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 308

Conread position: 1-664
Cow position: chr6:328559-327900 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 242

Conread position: 1-664
Cow position: chr6:888358-889020 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 308

Conread position: 1-664
Cow position: chr6:2876230-2875571 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr6:3152019-3152678 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr6:3886705-3886042 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 310

Conread position: 1-664
Cow position: chr6:5946974-5946312 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 76

Conread position: 1-664
Cow position: chr6:7138539-7137879 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr6:7467850-7467188 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 309

Conread position: 1-664
Cow position: chr6:10044016-10044669 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr6:11019458-11020121 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr6:11289655-11289004 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 211

Conread position: 1-664
Cow position: chr6:11722394-11721745 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 125

Conread position: 1-664
Cow position: chr6:16050489-16049830 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 233

Conread position: 1-664
Cow position: chr6:16592769-16593411 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 159

Conread position: 1-664
Cow position: chr6:17049172-17049836 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 133

Conread position: 1-664
Cow position: chr6:17121189-17121852 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 206

Conread position: 1-664
Cow position: chr6:19104107-19103445 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr6:20450769-20451422 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 94

Conread position: 1-664
Cow position: chr6:20553440-20552780 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 211

Conread position: 1-664
Cow position: chr6:21832857-21832197 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 90

Conread position: 1-664
Cow position: chr6:22737906-22737243 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-664
Cow position: chr6:25375293-25374645 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 1-664
Cow position: chr6:25790895-25790254 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 305

Conread position: 1-664
Cow position: chr6:26325398-26324737 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr6:27172631-27173304 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 259

Conread position: 1-664
Cow position: chr6:28064792-28065453 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 308

Conread position: 1-664
Cow position: chr6:31913374-31912712 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr6:34493478-34494135 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 31

Conread position: 1-664
Cow position: chr6:34504721-34504061 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 309

Conread position: 1-664
Cow position: chr6:35873910-35873269 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 82

Conread position: 1-664
Cow position: chr6:37387382-37388029 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 75

Conread position: 1-664
Cow position: chr6:39912126-39912785 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 281

Conread position: 1-664
Cow position: chr6:39999655-39998996 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 307

Conread position: 1-664
Cow position: chr6:51717347-51718020 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 50

Conread position: 1-664
Cow position: chr6:51732883-51733544 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr6:55539468-55538808 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 205

Conread position: 1-664
Cow position: chr6:56452294-56451632 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr6:60876100-60876759 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 311

Conread position: 1-664
Cow position: chr6:62664576-62665238 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 308

Conread position: 2-407
Cow position: chr6:30806068-30805664 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 264
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 25, 230

Conread position: 2-421
Cow position: chr6:1888635-1888232 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 189

Conread position: 2-426
Cow position: chr6:41414540-41414124 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 146

Conread position: 2-436
Cow position: chr6:14840636-14841062 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 111

Conread position: 2-450
Cow position: chr6:40158712-40158273 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 76

Conread position: 2-637
Cow position: chr6:26772319-26771688 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 307

Conread position: 2-651
Cow position: chr6:44950658-44950010 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 285

Conread position: 2-663
Cow position: chr6:1536513-1537167 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 49

Conread position: 2-664
Cow position: chr6:182738-182090 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 307

Conread position: 2-664
Cow position: chr6:11639420-11638743 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 135

Conread position: 2-664
Cow position: chr6:15138364-15137710 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 161

Conread position: 2-664
Cow position: chr6:24242093-24242750 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 196

Conread position: 2-664
Cow position: chr6:39331728-39331070 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 76

Conread position: 2-664
Cow position: chr6:40550896-40550237 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 132

Conread position: 2-664
Cow position: chr6:43186907-43187572 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 321

Conread position: 2-664
Cow position: chr6:44018025-44017365 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 103

Conread position: 2-664
Cow position: chr6:46947622-46948278 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 13

Conread position: 3-487
Cow position: chr6:65930047-65930539 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 289

Conread position: 3-509
Cow position: chr6:12628709-12629193 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 34

Conread position: 3-602
Cow position: chr6:27475215-27475803 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 255

Conread position: 3-654
Cow position: chr6:14950863-14950203 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 229

Conread position: 3-664
Cow position: chr6:45480273-45479625 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 184

Conread position: 3-664
Cow position: chr6:47040406-47039748 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 306

Conread position: 4-635
Cow position: chr6:28160216-28160841 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 302

Conread position: 4-649
Cow position: chr6:50121123-50120483 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 295

Conread position: 5-573
Cow position: chr6:68029984-68030549 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 304

Conread position: 5-630
Cow position: chr6:16418880-16418255 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 121

Conread position: 5-637
Cow position: chr6:26668218-26667591 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 191

Conread position: 5-659
Cow position: chr6:44147141-44146490 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 302

Conread position: 5-664
Cow position: chr6:55238502-55239153 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 303

Conread position: 7-649
Cow position: chr6:16703924-16703299 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 136

Conread position: 7-664
Cow position: chr6:55592863-55593533 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 117

Conread position: 9-663
Cow position: chr6:65819770-65819120 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 299

Conread position: 9-664
Cow position: chr6:28001567-28000933 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 225

Conread position: 11-664
Cow position: chr6:6556770-6557424 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 300

Conread position: 16-487
Cow position: chr6:57181636-57182095 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 274

Conread position: 20-664
Cow position: chr6:9234333-9234974 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 288

Conread position: 22-631
Cow position: chr6:24632421-24631823 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 112

Conread position: 26-288
Cow position: chr6:14264672-14264930 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 18, 179

Conread position: 30-664
Cow position: chr6:6182872-6182263 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 44

Conread position: 37-386
Cow position: chr6:11829796-11829453 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 267

Conread position: 37-567
Cow position: chr6:25358028-25357503 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 60

Conread position: 37-576
Cow position: chr6:52899794-52900319 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 83

Conread position: 37-583
Cow position: chr6:10571052-10570509 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 73

Conread position: 37-623
Cow position: chr6:27341444-27342015 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 37-630
Cow position: chr6:10650940-10650367 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 108

Conread position: 37-634
Cow position: chr6:58605372-58605961 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 163

Conread position: 37-657
Cow position: chr6:60167708-60167107 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 41

Conread position: 37-664
Cow position: chr6:22044166-22043546 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 267

Conread position: 37-664
Cow position: chr6:60332185-60332808 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 267

Conread position: 39-637
Cow position: chr6:3573641-3574220 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 43

Conread position: 40-275
Cow position: chr6:13315467-13315232 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 42-649
Cow position: chr6:55474155-55474753 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 20

Conread position: 46-664
Cow position: chr6:8205044-8205650 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 111

Conread position: 46-664
Cow position: chr6:50571040-50571654 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 260

Conread position: 46-664
Cow position: chr6:58030632-58031239 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 156

Conread position: 48-637
Cow position: chr6:28550207-28549602 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 138

Conread position: 48-664
Cow position: chr6:1498056-1498664 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 14

Conread position: 53-664
Cow position: chr6:57521031-57521638 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 253

Conread position: 55-631
Cow position: chr6:32419814-32420375 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 54

Conread position: 58-664
Cow position: chr6:4467475-4468083 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 336

Conread position: 62-443
Cow position: chr6:39897818-39898187 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 241

Conread position: 72-521
Cow position: chr6:2452723-2453164 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 140

Conread position: 77-637
Cow position: chr6:55945542-55944995 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 191

Conread position: 80-623
Cow position: chr6:62001463-62000924 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 108

Conread position: 84-664
Cow position: chr6:67553123-67553695 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 125

Conread position: 85-631
Cow position: chr6:618307-618840 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 184

Conread position: 87-507
Cow position: chr6:43049302-43048890 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 216

Conread position: 93-664
Cow position: chr6:705905-706461 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 83

Conread position: 93-664
Cow position: chr6:31940766-31941330 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 210

Conread position: 94-514
Cow position: chr6:4388640-4389055 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 209

Conread position: 95-625
Cow position: chr6:6595324-6595841 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 212

Conread position: 100-619
Cow position: chr6:47526162-47526678 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 345
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 60, 117

Conread position: 105-635
Cow position: chr6:67173466-67173987 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 198

Conread position: 108-481
Cow position: chr6:55042207-55041854 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 29

Conread position: 110-564
Cow position: chr6:33983739-33984173 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 98

Conread position: 113-664
Cow position: chr6:12997340-12997882 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 41

Conread position: 115-651
Cow position: chr6:27527038-27526516 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 87

Conread position: 119-466
Cow position: chr6:40759955-40760281 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 163

Conread position: 120-634
Cow position: chr6:16624707-16625211 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 24

Conread position: 121-483
Cow position: chr6:67211662-67211317 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 184

Conread position: 122-648
Cow position: chr6:34030215-34030700 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 107

Conread position: 123-545
Cow position: chr6:18497228-18497664 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 315

Conread position: 123-631
Cow position: chr6:38988865-38988396 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 340
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 268, 30

Conread position: 123-637
Cow position: chr6:50113620-50114107 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 7

Conread position: 123-637
Cow position: chr6:52978226-52977733 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 61

Conread position: 124-664
Cow position: chr6:33809504-33808971 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 179

Conread position: 125-659
Cow position: chr6:47171013-47171520 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 169

Conread position: 125-664
Cow position: chr6:17112232-17111703 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 12

Conread position: 125-664
Cow position: chr6:17386456-17386986 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 12

Conread position: 127-664
Cow position: chr6:47573735-47574252 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 128-651
Cow position: chr6:47150035-47149520 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 156

Conread position: 129-631
Cow position: chr6:52245445-52245929 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 60

Conread position: 131-533
Cow position: chr6:58016294-58016679 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 22

Conread position: 135-664
Cow position: chr6:35600620-35601141 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 168

Conread position: 136-648
Cow position: chr6:727678-727184 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 115

Conread position: 137-664
Cow position: chr6:11453925-11453404 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 166

Conread position: 138-664
Cow position: chr6:38438550-38439074 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 164

Conread position: 151-664
Cow position: chr6:7105572-7105071 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 153

Conread position: 152-660
Cow position: chr6:32019178-32018645 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 137

Conread position: 152-664
Cow position: chr6:2186824-2186319 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 151

Conread position: 153-569
Cow position: chr6:41531539-41531959 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 133

Conread position: 153-651
Cow position: chr6:29085416-29084935 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 147

Conread position: 153-664
Cow position: chr6:1796586-1797088 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 150

Conread position: 158-637
Cow position: chr6:67448962-67448492 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 145

Conread position: 159-633
Cow position: chr6:7112968-7112508 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 70

Conread position: 163-649
Cow position: chr6:14897153-14897628 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 64

Conread position: 163-656
Cow position: chr6:2087490-2087976 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 325
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 80, 137

Conread position: 166-617
Cow position: chr6:26748533-26748090 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 296
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 215, 97

Conread position: 169-637
Cow position: chr6:63177018-63177477 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 134

Conread position: 174-637
Cow position: chr6:2618583-2618133 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 61

Conread position: 174-637
Cow position: chr6:17556692-17556239 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 129

Conread position: 174-664
Cow position: chr6:452283-451800 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 129

Conread position: 178-664
Cow position: chr6:21857381-21856912 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 20

Conread position: 179-435
Cow position: chr6:13850723-13850968 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 124

Conread position: 179-637
Cow position: chr6:843843-843393 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 124

Conread position: 183-607
Cow position: chr6:13405218-13405624 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 282
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 208, 15

Conread position: 183-619
Cow position: chr6:22805852-22805424 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 288
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 208, 99

Conread position: 184-590
Cow position: chr6:43039077-43038683 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 69

Conread position: 184-664
Cow position: chr6:21711694-21712169 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 121

Conread position: 184-664
Cow position: chr6:23880066-23879596 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 119

Conread position: 185-617
Cow position: chr6:64425783-64426201 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 122

Conread position: 185-656
Cow position: chr6:12926564-12927027 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 118

Conread position: 189-651
Cow position: chr6:28481332-28481773 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 46

Conread position: 195-630
Cow position: chr6:10598005-10598428 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 68

Conread position: 195-660
Cow position: chr6:23568592-23568134 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 108

Conread position: 195-664
Cow position: chr6:6034796-6034337 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 108

Conread position: 196-617
Cow position: chr6:49761465-49761877 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 121

Conread position: 201-664
Cow position: chr6:40813372-40813824 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 102

Conread position: 204-664
Cow position: chr6:3485409-3484956 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 99

Conread position: 206-664
Cow position: chr6:57856781-57857233 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 97

Conread position: 213-598
Cow position: chr6:46633137-46633513 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 91

Conread position: 213-638
Cow position: chr6:224489-224073 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 97

Conread position: 213-656
Cow position: chr6:32286572-32287004 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 92

Conread position: 220-631
Cow position: chr6:45736817-45736440 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 79

Conread position: 223-612
Cow position: chr6:30492221-30491849 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 256
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 191, 61

Conread position: 223-637
Cow position: chr6:18987172-18987560 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 67

Conread position: 226-623
Cow position: chr6:62326306-62326690 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 266
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 165, 71

Conread position: 227-663
Cow position: chr6:1834027-1834457 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 77

Conread position: 229-637
Cow position: chr6:15471775-15471379 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 272
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 161, 20

Conread position: 230-664
Cow position: chr6:46764366-46763943 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 73

Conread position: 230-664
Cow position: chr6:53537108-53537539 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 76

Conread position: 235-587
Cow position: chr6:34405342-34405686 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 68

Conread position: 238-637
Cow position: chr6:39136546-39136932 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 65

Conread position: 239-664
Cow position: chr6:46284054-46283642 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 65

Conread position: 243-650
Cow position: chr6:35704472-35704070 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 60

Conread position: 246-637
Cow position: chr6:6944887-6944513 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 61

Conread position: 249-637
Cow position: chr6:16410115-16410488 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 35

Conread position: 249-664
Cow position: chr6:18804003-18803596 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 54

Conread position: 257-642
Cow position: chr6:13314966-13314591 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 46

Conread position: 258-583
Cow position: chr6:4274133-4274449 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 22, 50

Conread position: 259-660
Cow position: chr6:24624073-24623683 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 48

Conread position: 260-664
Cow position: chr6:10681060-10681447 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 34

Conread position: 293-651
Cow position: chr6:33300749-33301118 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 147

Conread position: 305-637
Cow position: chr6:6471836-6471502 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 112

Conread position: 310-586
Cow position: chr6:25180079-25179802 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 120

Conread position: 312-658
Cow position: chr6:55903194-55903546 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 143

Conread position: 312-664
Cow position: chr6:8754350-8753992 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 94

Conread position: 313-664
Cow position: chr6:4903893-4903538 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 139

Conread position: 319-435
Cow position: chr6:28178332-28178450 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 319-486
Cow position: chr6:50113164-50113332 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 70, 120

Conread position: 319-512
Cow position: chr6:33996859-33997053 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 120

Conread position: 319-518
Cow position: chr6:9587647-9587850 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 72, 120

Conread position: 319-522
Cow position: chr6:28399660-28399454 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 72, 122

Conread position: 319-587
Cow position: chr6:50485670-50485400 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 20

Conread position: 319-610
Cow position: chr6:27939146-27939440 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-625
Cow position: chr6:49963841-49963526 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 200
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 20, 121

Conread position: 319-628
Cow position: chr6:58595294-58594984 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 70, 119

Conread position: 319-631
Cow position: chr6:52066009-52065693 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 120

Conread position: 319-634
Cow position: chr6:28157153-28156839 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 70, 90

Conread position: 319-637
Cow position: chr6:6569115-6568800 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 20

Conread position: 319-637
Cow position: chr6:16645008-16645318 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 119

Conread position: 319-637
Cow position: chr6:27094474-27094153 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-637
Cow position: chr6:43087484-43087170 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 97

Conread position: 319-649
Cow position: chr6:42988688-42988359 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 114, 43

Conread position: 319-660
Cow position: chr6:29484093-29484437 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 100

Conread position: 319-663
Cow position: chr6:1263280-1263618 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 21

Conread position: 319-664
Cow position: chr6:1274733-1274391 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 97

Conread position: 319-664
Cow position: chr6:11401432-11401783 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-664
Cow position: chr6:19718697-19719032 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 119

Conread position: 319-664
Cow position: chr6:21163415-21163766 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-664
Cow position: chr6:43778818-43779154 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 109

Conread position: 319-664
Cow position: chr6:56925844-56926196 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 120

Conread position: 320-622
Cow position: chr6:14264141-14263838 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 103

Conread position: 320-638
Cow position: chr6:47539492-47539814 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 217
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 72, 93

Conread position: 320-664
Cow position: chr6:21588097-21588447 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 118

Conread position: 321-505
Cow position: chr6:16221014-16220829 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 161, 118

Conread position: 321-586
Cow position: chr6:45792848-45793116 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 24

Conread position: 321-624
Cow position: chr6:19044328-19044627 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 93

Conread position: 321-656
Cow position: chr6:17150060-17149716 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 126

Conread position: 321-656
Cow position: chr6:45666813-45666475 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 125

Conread position: 322-637
Cow position: chr6:6613431-6613730 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 75

Conread position: 322-649
Cow position: chr6:27365291-27365618 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 223
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 69, 18

Conread position: 323-664
Cow position: chr6:53810705-53811041 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 84

Conread position: 326-649
Cow position: chr6:15181274-15181603 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 65, 130

Conread position: 327-651
Cow position: chr6:52557516-52557205 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 165, 52

Conread position: 327-654
Cow position: chr6:33896520-33896191 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 227
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 64, 111

Conread position: 329-628
Cow position: chr6:44097827-44098130 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 8, 111

Conread position: 329-635
Cow position: chr6:1402435-1402131 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 87

Conread position: 329-635
Cow position: chr6:1407023-1406719 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 87

Conread position: 329-664
Cow position: chr6:45937413-45937742 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 91

Conread position: 331-617
Cow position: chr6:65909448-65909741 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 61, 99

Conread position: 333-664
Cow position: chr6:51876890-51877218 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 81

Conread position: 335-625
Cow position: chr6:14144150-14144442 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 54, 72

Conread position: 340-649
Cow position: chr6:65859202-65858907 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 299, 61

Conread position: 341-664
Cow position: chr6:508388-508058 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 98

Conread position: 341-664
Cow position: chr6:45975633-45975962 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 98

Conread position: 343-664
Cow position: chr6:40251661-40251337 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 59

Conread position: 346-660
Cow position: chr6:12388315-12388003 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 72

Conread position: 348-649
Cow position: chr6:54472504-54472211 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 203
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 77

Conread position: 349-574
Cow position: chr6:12099660-12099875 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 96, 29

Conread position: 351-656
Cow position: chr6:7215941-7216250 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 11

Conread position: 352-637
Cow position: chr6:5096657-5096374 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 28

Conread position: 352-664
Cow position: chr6:51673919-51674229 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 23

Conread position: 355-492
Cow position: chr6:62784918-62785057 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 86

Conread position: 358-637
Cow position: chr6:2111248-2110966 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 91

Conread position: 360-575
Cow position: chr6:57383569-57383789 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 31, 78

Conread position: 361-664
Cow position: chr6:46225808-46225502 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 78

Conread position: 369-598
Cow position: chr6:53742089-53742315 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 51

Conread position: 375-649
Cow position: chr6:54358348-54358078 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 61, 106

Conread position: 375-651
Cow position: chr6:27887080-27887357 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 75

Conread position: 383-664
Cow position: chr6:11389436-11389151 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 54

Conread position: 388-637
Cow position: chr6:1109190-1109442 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 127

Conread position: 388-664
Cow position: chr6:32664919-32664638 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 412-637
Cow position: chr6:53461972-53461745 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 77, 26

Conread position: 436-649
Cow position: chr6:25408459-25408246 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 203, 49

Conread position: 449-649
Cow position: chr6:58036525-58036729 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 23

Conread position: 451-616
Cow position: chr6:32419516-32419683 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 12

Conread position: 452-664
Cow position: chr6:43790122-43789905 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 173
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 59

Conread position: 452-664
Cow position: chr6:48873078-48872861 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 171
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 63

Conread position: 454-664
Cow position: chr6:10266879-10266664 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 26, 65

Conread position: 461-587
Cow position: chr6:61632388-61632517 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 112
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 54

Conread position: 461-660
Cow position: chr6:28112579-28112379 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 48, 24

Conread position: 465-598
Cow position: chr6:63210354-63210484 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 468-663
Cow position: chr6:47380949-47381146 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 174, 43

Conread position: 478-655
Cow position: chr6:40158266-40158090 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 26

Conread position: 491-637
Cow position: chr6:67186830-67186975 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 496-664
Cow position: chr6:4389004-4389175 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 16

Conread position: 501-656
Cow position: chr6:10602737-10602580 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 142, 0

Conread position: 508-658
Cow position: chr6:49442247-49442400 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 0

Show alignments to all cow chromosomes.