Cow genome map
| Conread name: | Pig4-TMW8006O17 | 
| Conread position: | 1-475 | 
| Cow position: | chr9:6549907-6550375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-477 | 
| Cow position: | chr9:52401689-52402159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 366 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-481 | 
| Cow position: | chr9:826203-825719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 193 | 
| Conread position: | 1-483 | 
| Cow position: | chr9:27897740-27898212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 85 | 
| Conread position: | 1-483 | 
| Cow position: | chr9:56176500-56176976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 373 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-487 | 
| Cow position: | chr9:59508443-59507969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 156 | 
| Conread position: | 1-516 | 
| Cow position: | chr9:2484886-2484381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 190 | 
| Conread position: | 1-517 | 
| Cow position: | chr9:43225973-43225462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 527 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 310 | 
| Conread position: | 1-536 | 
| Cow position: | chr9:17301402-17300868 (view UCSC Genome Browser custom track) | 
| Alignm length: | 554 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 314 | 
| Conread position: | 1-582 | 
| Cow position: | chr9:29787928-29787368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 97 | 
| Conread position: | 1-592 | 
| Cow position: | chr9:18539395-18539975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 604 | 
| Alignm identity: | 464 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 100 | 
| Conread position: | 1-600 | 
| Cow position: | chr9:64049015-64049587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 607 | 
| Alignm identity: | 445 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 53 | 
| Conread position: | 1-602 | 
| Cow position: | chr9:14002770-14003357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 610 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 214 | 
| Conread position: | 1-618 | 
| Cow position: | chr9:12260631-12260021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 627 | 
| Alignm identity: | 471 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 302 | 
| Conread position: | 1-619 | 
| Cow position: | chr9:62130764-62131387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 164 | 
| Conread position: | 1-625 | 
| Cow position: | chr9:9198834-9199441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 637 | 
| Alignm identity: | 455 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 69 | 
| Conread position: | 1-634 | 
| Cow position: | chr9:2496011-2495381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 466 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 308 | 
| Conread position: | 1-634 | 
| Cow position: | chr9:30401032-30401642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 498 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 16 | 
| Conread position: | 1-635 | 
| Cow position: | chr9:1099324-1099955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 485 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 305 | 
| Conread position: | 1-635 | 
| Cow position: | chr9:54995372-54995991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 463 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 307 | 
| Conread position: | 1-637 | 
| Cow position: | chr9:1071555-1070921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 490 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 51 | 
| Conread position: | 1-637 | 
| Cow position: | chr9:2835265-2834638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 479 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 127 | 
| Conread position: | 1-637 | 
| Cow position: | chr9:8952307-8951686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 457 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 313 | 
| Conread position: | 1-637 | 
| Cow position: | chr9:30139867-30139255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 467 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 53 | 
| Conread position: | 1-637 | 
| Cow position: | chr9:38678859-38679461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 474 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 182 | 
| Conread position: | 1-637 | 
| Cow position: | chr9:47044677-47045310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 492 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-637 | 
| Cow position: | chr9:59196587-59197212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 490 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 307 | 
| Conread position: | 1-638 | 
| Cow position: | chr9:35817-35197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 467 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 264 | 
| Conread position: | 1-640 | 
| Cow position: | chr9:62444244-62443623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 466 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 133 | 
| Conread position: | 1-649 | 
| Cow position: | chr9:3412187-3411519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 468 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 82 | 
| Conread position: | 1-649 | 
| Cow position: | chr9:52002363-52001735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 497 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 17 | 
| Conread position: | 1-651 | 
| Cow position: | chr9:1998565-1997924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 664 | 
| Alignm identity: | 508 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-654 | 
| Cow position: | chr9:13472831-13472197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 497 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 248 | 
| Conread position: | 1-656 | 
| Cow position: | chr9:9958450-9957805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 666 | 
| Alignm identity: | 491 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 125 | 
| Conread position: | 1-656 | 
| Cow position: | chr9:18507094-18506441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 498 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-656 | 
| Cow position: | chr9:30282271-30281632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 675 | 
| Alignm identity: | 485 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 167 | 
| Conread position: | 1-658 | 
| Cow position: | chr9:21461215-21461844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 666 | 
| Alignm identity: | 489 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 46 | 
| Conread position: | 1-660 | 
| Cow position: | chr9:2173266-2173921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 680 | 
| Alignm identity: | 492 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 86 | 
| Conread position: | 1-660 | 
| Cow position: | chr9:4940769-4940112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 675 | 
| Alignm identity: | 502 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 215 | 
| Conread position: | 1-660 | 
| Cow position: | chr9:5627549-5628207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 676 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 309 | 
| Conread position: | 1-660 | 
| Cow position: | chr9:19156554-19155904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 675 | 
| Alignm identity: | 506 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 60 | 
| Conread position: | 1-660 | 
| Cow position: | chr9:52408588-52407935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 683 | 
| Alignm identity: | 517 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 74 | 
| Conread position: | 1-662 | 
| Cow position: | chr9:45876250-45876908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 677 | 
| Alignm identity: | 504 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 85 | 
| Conread position: | 1-663 | 
| Cow position: | chr9:791585-790921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 685 | 
| Alignm identity: | 483 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 158 | 
| Conread position: | 1-663 | 
| Cow position: | chr9:7104501-7103840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 677 | 
| Alignm identity: | 499 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-663 | 
| Cow position: | chr9:44168320-44168982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 679 | 
| Alignm identity: | 509 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 138 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:778086-777419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 683 | 
| Alignm identity: | 507 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 311 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:1991805-1991162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 500 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 169 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:2856574-2857235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 503 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:2873204-2873867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 679 | 
| Alignm identity: | 507 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:3061321-3061979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 510 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 279 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:3545558-3546208 (view UCSC Genome Browser custom track) | 
| Alignm length: | 672 | 
| Alignm identity: | 491 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 8 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:3757101-3756447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 675 | 
| Alignm identity: | 512 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:5006713-5007357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 680 | 
| Alignm identity: | 499 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 100 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:5430197-5430858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 511 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 301 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:5452910-5452248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 510 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:6252299-6252956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 679 | 
| Alignm identity: | 521 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 91 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:6765041-6764377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 680 | 
| Alignm identity: | 504 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 307 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:7005449-7006132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 700 | 
| Alignm identity: | 507 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 330 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:9015804-9016466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 516 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:10567633-10566969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 683 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 306 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:10856750-10857424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 690 | 
| Alignm identity: | 526 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:13312295-13312949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 676 | 
| Alignm identity: | 507 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 248 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:14045405-14046057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 513 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 33 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:17303242-17302588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 517 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 122 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:17633208-17633879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 683 | 
| Alignm identity: | 504 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 120 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:21412042-21412695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 682 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:22569834-22570496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 679 | 
| Alignm identity: | 513 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 309 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:22655543-22656190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 676 | 
| Alignm identity: | 514 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 107 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:26325476-26326137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 510 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:27037838-27038505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 685 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:28024549-28025212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 680 | 
| Alignm identity: | 514 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 309 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:28680930-28681592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 508 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:31417774-31417124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 502 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 110 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:31810308-31810969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 509 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 150 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:32972097-32972758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:36845194-36844549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 672 | 
| Alignm identity: | 494 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 278 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:37158880-37158220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 676 | 
| Alignm identity: | 512 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:37174675-37174013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:42569946-42570607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 679 | 
| Alignm identity: | 522 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 233 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:43495864-43496526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 512 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:44203339-44202688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 680 | 
| Alignm identity: | 508 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 107 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:46627043-46627703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 513 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 98 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:46668068-46667406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 680 | 
| Alignm identity: | 505 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 32 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:47005471-47006125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 681 | 
| Alignm identity: | 508 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 309 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:47170776-47171445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 685 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 314 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:48795562-48794900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 680 | 
| Alignm identity: | 512 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:50840163-50840824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 509 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 289 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:54459771-54459110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 517 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 111 | 
| Conread position: | 1-664 | 
| Cow position: | chr9:64012499-64011837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 514 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 308 | 
| Conread position: | 2-422 | 
| Cow position: | chr9:23044201-23044614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 167 | 
| Conread position: | 2-617 | 
| Cow position: | chr9:22442222-22442823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 629 | 
| Alignm identity: | 455 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 181 | 
| Conread position: | 2-624 | 
| Cow position: | chr9:43643917-43643293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 639 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 59 | 
| Conread position: | 2-637 | 
| Cow position: | chr9:218384-217753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 465 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 193 | 
| Conread position: | 2-637 | 
| Cow position: | chr9:26054778-26055393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 474 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 75 | 
| Conread position: | 2-637 | 
| Cow position: | chr9:55797373-55796743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 443 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 124 | 
| Conread position: | 2-652 | 
| Cow position: | chr9:3806329-3806972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 502 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 165 | 
| Conread position: | 2-660 | 
| Cow position: | chr9:16178326-16178972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 510 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 389, 43 | 
| Conread position: | 2-660 | 
| Cow position: | chr9:40143623-40142965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 683 | 
| Alignm identity: | 511 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 271 | 
| Conread position: | 2-664 | 
| Cow position: | chr9:7059331-7058659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 689 | 
| Alignm identity: | 499 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 49 | 
| Conread position: | 3-268 | 
| Cow position: | chr9:9261127-9261403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 187 | 
| Conread position: | 3-280 | 
| Cow position: | chr9:36601386-36601674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 21, 233 | 
| Conread position: | 3-301 | 
| Cow position: | chr9:25976263-25976563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 12 | 
| Conread position: | 3-487 | 
| Cow position: | chr9:1249265-1248787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 306 | 
| Conread position: | 3-557 | 
| Cow position: | chr9:10939456-10939997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 563 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 306 | 
| Conread position: | 3-631 | 
| Cow position: | chr9:2208936-2208315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 474 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 261 | 
| Conread position: | 3-651 | 
| Cow position: | chr9:3998027-3997391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 478 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 245 | 
| Conread position: | 3-664 | 
| Cow position: | chr9:1062963-1062304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 676 | 
| Alignm identity: | 498 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 306 | 
| Conread position: | 3-664 | 
| Cow position: | chr9:28658317-28657665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 676 | 
| Alignm identity: | 509 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 306 | 
| Conread position: | 3-664 | 
| Cow position: | chr9:30674807-30675466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 675 | 
| Alignm identity: | 502 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 306 | 
| Conread position: | 3-664 | 
| Cow position: | chr9:59480116-59479465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 676 | 
| Alignm identity: | 511 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 306 | 
| Conread position: | 4-637 | 
| Cow position: | chr9:5609028-5608410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 107 | 
| Conread position: | 4-664 | 
| Cow position: | chr9:39303820-39303161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 675 | 
| Alignm identity: | 507 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 305 | 
| Conread position: | 5-630 | 
| Cow position: | chr9:15053146-15052534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 639 | 
| Alignm identity: | 460 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 247 | 
| Conread position: | 5-637 | 
| Cow position: | chr9:2213881-2214502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 469 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 46 | 
| Conread position: | 5-648 | 
| Cow position: | chr9:46525471-46524844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 465 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 56 | 
| Conread position: | 5-664 | 
| Cow position: | chr9:6708183-6707526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 674 | 
| Alignm identity: | 495 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 210 | 
| Conread position: | 9-664 | 
| Cow position: | chr9:17017491-17018146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 673 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 301 | 
| Conread position: | 9-664 | 
| Cow position: | chr9:28785080-28785734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 673 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 302 | 
| Conread position: | 10-664 | 
| Cow position: | chr9:52525890-52526543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 501 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 299 | 
| Conread position: | 22-637 | 
| Cow position: | chr9:4647882-4647282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 623 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 124 | 
| Conread position: | 37-338 | 
| Cow position: | chr9:2288378-2288087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 148, 0 | 
| Conread position: | 37-619 | 
| Cow position: | chr9:4128173-4127610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 593 | 
| Alignm identity: | 443 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 131 | 
| Conread position: | 37-634 | 
| Cow position: | chr9:5516961-5517538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 603 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 70 | 
| Conread position: | 37-656 | 
| Cow position: | chr9:13220314-13220921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 630 | 
| Alignm identity: | 478 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 248 | 
| Conread position: | 37-664 | 
| Cow position: | chr9:2527059-2527668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 634 | 
| Alignm identity: | 454 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 272 | 
| Conread position: | 37-664 | 
| Cow position: | chr9:34059862-34059241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 639 | 
| Alignm identity: | 488 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 267 | 
| Conread position: | 40-664 | 
| Cow position: | chr9:20941249-20941869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 638 | 
| Alignm identity: | 479 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 351, 199 | 
| Conread position: | 42-637 | 
| Cow position: | chr9:13180693-13181272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 605 | 
| Alignm identity: | 462 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 201 | 
| Conread position: | 42-664 | 
| Cow position: | chr9:18071263-18071873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 632 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 74 | 
| Conread position: | 46-638 | 
| Cow position: | chr9:62669769-62669190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 447 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 345, 92 | 
| Conread position: | 50-664 | 
| Cow position: | chr9:5328562-5327974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 619 | 
| Alignm identity: | 455 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 590, 140 | 
| Conread position: | 58-649 | 
| Cow position: | chr9:3222267-3222839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 600 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 64 | 
| Conread position: | 62-573 | 
| Cow position: | chr9:22319616-22319117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 518 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 327, 85 | 
| Conread position: | 71-664 | 
| Cow position: | chr9:6365183-6365768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 602 | 
| Alignm identity: | 471 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 320, 232 | 
| Conread position: | 75-630 | 
| Cow position: | chr9:10110812-10111340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 374 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 7 | 
| Conread position: | 80-584 | 
| Cow position: | chr9:36584812-36585291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 508 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 311, 163 | 
| Conread position: | 80-664 | 
| Cow position: | chr9:24918473-24917896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 597 | 
| Alignm identity: | 461 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 311, 223 | 
| Conread position: | 80-664 | 
| Cow position: | chr9:29193745-29193179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 593 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 309, 58 | 
| Conread position: | 87-649 | 
| Cow position: | chr9:1640077-1640630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 304, 216 | 
| Conread position: | 92-664 | 
| Cow position: | chr9:2548868-2548306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 581 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 290, 212 | 
| Conread position: | 92-664 | 
| Cow position: | chr9:38633607-38634171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 585 | 
| Alignm identity: | 450 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 299, 211 | 
| Conread position: | 94-630 | 
| Cow position: | chr9:51692791-51692261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 297, 209 | 
| Conread position: | 97-634 | 
| Cow position: | chr9:50775539-50776058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 544 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 134 | 
| Conread position: | 97-664 | 
| Cow position: | chr9:45791680-45792240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 576 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 294, 206 | 
| Conread position: | 99-660 | 
| Cow position: | chr9:53776535-53777079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 419 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 290, 138 | 
| Conread position: | 100-637 | 
| Cow position: | chr9:3217497-3216977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 542 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 289, 28 | 
| Conread position: | 101-664 | 
| Cow position: | chr9:37253240-37253796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 572 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 290, 202 | 
| Conread position: | 102-583 | 
| Cow position: | chr9:39728780-39728301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 32 | 
| Conread position: | 102-637 | 
| Cow position: | chr9:56862310-56861818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 289, 40 | 
| Conread position: | 109-656 | 
| Cow position: | chr9:51010411-51010917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 552 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 162 | 
| Conread position: | 111-582 | 
| Cow position: | chr9:43856691-43856231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 278, 156 | 
| Conread position: | 114-529 | 
| Cow position: | chr9:17587994-17588392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 164, 28 | 
| Conread position: | 115-508 | 
| Cow position: | chr9:2190095-2190483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 181 | 
| Conread position: | 116-664 | 
| Cow position: | chr9:54413756-54413218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 273, 100 | 
| Conread position: | 122-664 | 
| Cow position: | chr9:41313184-41312649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 551 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 267, 181 | 
| Conread position: | 124-619 | 
| Cow position: | chr9:40729-40250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 504 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 261, 70 | 
| Conread position: | 124-656 | 
| Cow position: | chr9:10679066-10678545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 542 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 268, 160 | 
| Conread position: | 127-604 | 
| Cow position: | chr9:15986871-15987335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 111 | 
| Conread position: | 153-551 | 
| Cow position: | chr9:9021717-9021328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 238, 150 | 
| Conread position: | 157-664 | 
| Cow position: | chr9:1837847-1838342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 512 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 234, 146 | 
| Conread position: | 163-664 | 
| Cow position: | chr9:12285809-12285316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 228, 140 | 
| Conread position: | 164-660 | 
| Cow position: | chr9:42868969-42868484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 508 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 227, 18 | 
| Conread position: | 166-652 | 
| Cow position: | chr9:18109602-18110077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 137 | 
| Conread position: | 167-650 | 
| Cow position: | chr9:29337811-29338283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 200, 12 | 
| Conread position: | 168-509 | 
| Cow position: | chr9:37181765-37182098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 223, 135 | 
| Conread position: | 172-654 | 
| Cow position: | chr9:36506062-36506531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 219, 130 | 
| Conread position: | 183-664 | 
| Cow position: | chr9:13187122-13187596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 208, 120 | 
| Conread position: | 184-630 | 
| Cow position: | chr9:62764386-62763952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 207, 5 | 
| Conread position: | 184-664 | 
| Cow position: | chr9:17061437-17060966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 366 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 207, 50 | 
| Conread position: | 184-664 | 
| Cow position: | chr9:34238840-34238367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 367 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 207, 119 | 
| Conread position: | 190-660 | 
| Cow position: | chr9:50326623-50327084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 201, 59 | 
| Conread position: | 194-490 | 
| Cow position: | chr9:31124005-31124289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 195, 109 | 
| Conread position: | 195-658 | 
| Cow position: | chr9:13492684-13493124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 196, 14 | 
| Conread position: | 201-654 | 
| Cow position: | chr9:9210079-9210525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 190, 102 | 
| Conread position: | 201-664 | 
| Cow position: | chr9:18830676-18831124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 190, 102 | 
| Conread position: | 201-664 | 
| Cow position: | chr9:33843260-33843715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 190, 62 | 
| Conread position: | 203-637 | 
| Cow position: | chr9:382951-382531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 188, 100 | 
| Conread position: | 205-574 | 
| Cow position: | chr9:9871879-9872239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 186, 98 | 
| Conread position: | 208-664 | 
| Cow position: | chr9:1519540-1519973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 178, 24 | 
| Conread position: | 211-617 | 
| Cow position: | chr9:854931-855336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 15, 8 | 
| Conread position: | 213-631 | 
| Cow position: | chr9:44580276-44579864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 54, 91 | 
| Conread position: | 216-660 | 
| Cow position: | chr9:28702400-28702838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 13, 88 | 
| Conread position: | 219-532 | 
| Cow position: | chr9:2677268-2676973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 172, 11 | 
| Conread position: | 219-649 | 
| Cow position: | chr9:4284179-4284597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 172, 10 | 
| Conread position: | 222-664 | 
| Cow position: | chr9:51178712-51178276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 82 | 
| Conread position: | 223-656 | 
| Cow position: | chr9:23297948-23297528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 165, 32 | 
| Conread position: | 225-637 | 
| Cow position: | chr9:174813-174411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 166, 78 | 
| Conread position: | 226-664 | 
| Cow position: | chr9:27781951-27781520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 165, 77 | 
| Conread position: | 230-630 | 
| Cow position: | chr9:9491976-9491600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 161, 64 | 
| Conread position: | 230-637 | 
| Cow position: | chr9:34900431-34900833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 72 | 
| Conread position: | 232-508 | 
| Cow position: | chr9:60589738-60589998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 119, 71 | 
| Conread position: | 235-664 | 
| Cow position: | chr9:59496213-59495791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 156, 68 | 
| Conread position: | 236-660 | 
| Cow position: | chr9:47263002-47263426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 144, 54 | 
| Conread position: | 243-458 | 
| Cow position: | chr9:1740734-1740533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 148, 60 | 
| Conread position: | 243-664 | 
| Cow position: | chr9:19545489-19545902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 148, 60 | 
| Conread position: | 250-664 | 
| Cow position: | chr9:4673047-4673447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 141, 53 | 
| Conread position: | 257-520 | 
| Cow position: | chr9:44920229-44920481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 134, 46 | 
| Conread position: | 271-487 | 
| Cow position: | chr9:9357166-9357379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 44, 32 | 
| Conread position: | 287-556 | 
| Cow position: | chr9:34460593-34460321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 104, 7 | 
| Conread position: | 305-631 | 
| Cow position: | chr9:2222695-2223020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 10, 63 | 
| Conread position: | 309-649 | 
| Cow position: | chr9:34688514-34688840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 9, 134 | 
| Conread position: | 310-636 | 
| Cow position: | chr9:64562242-64562565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 96 | 
| Conread position: | 310-637 | 
| Cow position: | chr9:5533893-5533577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 82, 51 | 
| Conread position: | 311-619 | 
| Cow position: | chr9:43320687-43320378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 9, 71 | 
| Conread position: | 313-660 | 
| Cow position: | chr9:12161630-12161984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 135 | 
| Conread position: | 316-660 | 
| Cow position: | chr9:49034001-49034330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 97, 73 | 
| Conread position: | 317-533 | 
| Cow position: | chr9:26077827-26077618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 71, 99 | 
| Conread position: | 319-529 | 
| Cow position: | chr9:15802440-15802654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 72, 120 | 
| Conread position: | 319-531 | 
| Cow position: | chr9:59167681-59167465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 72, 40 | 
| Conread position: | 319-532 | 
| Cow position: | chr9:50003764-50003981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 70, 119 | 
| Conread position: | 319-637 | 
| Cow position: | chr9:18710534-18710855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 120 | 
| Conread position: | 319-637 | 
| Cow position: | chr9:60409443-60409765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 120 | 
| Conread position: | 319-648 | 
| Cow position: | chr9:35023006-35023329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 72, 30 | 
| Conread position: | 319-649 | 
| Cow position: | chr9:1850602-1850277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 80 | 
| Conread position: | 319-649 | 
| Cow position: | chr9:22803611-22803276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 131 | 
| Conread position: | 319-649 | 
| Cow position: | chr9:33056824-33057159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 118 | 
| Conread position: | 319-649 | 
| Cow position: | chr9:34917660-34917990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 119 | 
| Conread position: | 319-654 | 
| Cow position: | chr9:5887350-5887014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 175 | 
| Conread position: | 319-656 | 
| Cow position: | chr9:10672293-10671960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 55 | 
| Conread position: | 319-664 | 
| Cow position: | chr9:3052306-3052657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 120 | 
| Conread position: | 319-664 | 
| Cow position: | chr9:8282227-8281878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 97 | 
| Conread position: | 319-664 | 
| Cow position: | chr9:35565499-35565147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 121 | 
| Conread position: | 319-664 | 
| Cow position: | chr9:35624355-35624706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 120 | 
| Conread position: | 319-664 | 
| Cow position: | chr9:36830011-36829660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 131 | 
| Conread position: | 319-664 | 
| Cow position: | chr9:43494089-43494440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 120 | 
| Conread position: | 319-664 | 
| Cow position: | chr9:62818180-62817829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 120 | 
| Conread position: | 320-649 | 
| Cow position: | chr9:34567690-34568020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 160, 94 | 
| Conread position: | 321-637 | 
| Cow position: | chr9:63563457-63563783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 197 | 
| Conread position: | 321-660 | 
| Cow position: | chr9:31411686-31411348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 84, 64 | 
| Conread position: | 323-664 | 
| Cow position: | chr9:49981549-49981888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 50 | 
| Conread position: | 326-532 | 
| Cow position: | chr9:25596700-25596909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 63, 113 | 
| Conread position: | 326-556 | 
| Cow position: | chr9:4191329-4191563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 65, 113 | 
| Conread position: | 326-635 | 
| Cow position: | chr9:25548107-25547793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 115 | 
| Conread position: | 326-664 | 
| Cow position: | chr9:772198-771856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 156, 110 | 
| Conread position: | 327-649 | 
| Cow position: | chr9:23028967-23028653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 159, 37 | 
| Conread position: | 327-664 | 
| Cow position: | chr9:2618748-2618393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 112 | 
| Conread position: | 328-582 | 
| Cow position: | chr9:58747768-58747514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 63, 109 | 
| Conread position: | 328-616 | 
| Cow position: | chr9:11286841-11286559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 63, 98 | 
| Conread position: | 331-619 | 
| Cow position: | chr9:24996429-24996706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 60, 23 | 
| Conread position: | 332-651 | 
| Cow position: | chr9:1983429-1983746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 160, 62 | 
| Conread position: | 332-664 | 
| Cow position: | chr9:1259486-1259828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 107 | 
| Conread position: | 335-664 | 
| Cow position: | chr9:4552864-4553185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 80 | 
| Conread position: | 340-649 | 
| Cow position: | chr9:54996936-54997250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 51, 15 | 
| Conread position: | 341-664 | 
| Cow position: | chr9:55031568-55031896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 89 | 
| Conread position: | 342-622 | 
| Cow position: | chr9:5059018-5058732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 49, 95 | 
| Conread position: | 345-664 | 
| Cow position: | chr9:34690463-34690142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 94 | 
| Conread position: | 347-645 | 
| Cow position: | chr9:1307283-1306979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 91 | 
| Conread position: | 351-658 | 
| Cow position: | chr9:9623015-9623319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 234, 21 | 
| Conread position: | 354-651 | 
| Cow position: | chr9:50728141-50727841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 35, 103 | 
| Conread position: | 360-637 | 
| Cow position: | chr9:44820968-44821247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 79 | 
| Conread position: | 365-659 | 
| Cow position: | chr9:30737426-30737129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 73 | 
| Conread position: | 369-664 | 
| Cow position: | chr9:59539003-59539294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 15 | 
| Conread position: | 371-664 | 
| Cow position: | chr9:40316229-40316526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 69 | 
| Conread position: | 375-637 | 
| Cow position: | chr9:26576798-26577054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 16, 63 | 
| Conread position: | 382-660 | 
| Cow position: | chr9:3388717-3388440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 118, 25 | 
| Conread position: | 388-664 | 
| Cow position: | chr9:22755812-22755537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 94, 50 | 
| Conread position: | 389-522 | 
| Cow position: | chr9:15214647-15214783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 8, 59 | 
| Conread position: | 391-664 | 
| Cow position: | chr9:43302486-43302212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 98, 37 | 
| Conread position: | 403-606 | 
| Cow position: | chr9:29826352-29826158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 403-664 | 
| Cow position: | chr9:47883156-47882897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 236, 35 | 
| Conread position: | 407-664 | 
| Cow position: | chr9:6304566-6304828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 73, 40 | 
| Conread position: | 416-653 | 
| Cow position: | chr9:36621861-36622097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 66, 30 | 
| Conread position: | 439-637 | 
| Cow position: | chr9:51556135-51556330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 441-654 | 
| Cow position: | chr9:17993186-17992973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 198, 70 | 
| Conread position: | 444-637 | 
| Cow position: | chr9:8386987-8387183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 45, 71 | 
| Conread position: | 447-660 | 
| Cow position: | chr9:10326403-10326621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 42, 68 | 
| Conread position: | 452-664 | 
| Cow position: | chr9:5414877-5414659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 28, 64 | 
| Conread position: | 465-656 | 
| Cow position: | chr9:64054640-64054826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 466-634 | 
| Cow position: | chr9:34554050-34553879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 17, 44 | 
| Conread position: | 472-664 | 
| Cow position: | chr9:1856650-1856458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 481-625 | 
| Cow position: | chr9:58133395-58133252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 498-640 | 
| Cow position: | chr9:60590015-60590152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 502-656 | 
| Cow position: | chr9:44624139-44623983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 125, 9 | 
| Conread position: | 508-649 | 
| Cow position: | chr9:9357377-9357518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
Show alignments to all cow chromosomes.
