Cow genome map

Conread name: Pig4-TMW8006O17

Conread position: 1-475
Cow position: chr9:6549907-6550375 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-477
Cow position: chr9:52401689-52402159 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-481
Cow position: chr9:826203-825719 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 193

Conread position: 1-483
Cow position: chr9:27897740-27898212 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 85

Conread position: 1-483
Cow position: chr9:56176500-56176976 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-487
Cow position: chr9:59508443-59507969 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 156

Conread position: 1-516
Cow position: chr9:2484886-2484381 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 190

Conread position: 1-517
Cow position: chr9:43225973-43225462 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 310

Conread position: 1-536
Cow position: chr9:17301402-17300868 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 314

Conread position: 1-582
Cow position: chr9:29787928-29787368 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 97

Conread position: 1-592
Cow position: chr9:18539395-18539975 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 100

Conread position: 1-600
Cow position: chr9:64049015-64049587 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 53

Conread position: 1-602
Cow position: chr9:14002770-14003357 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 214

Conread position: 1-618
Cow position: chr9:12260631-12260021 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 302

Conread position: 1-619
Cow position: chr9:62130764-62131387 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 164

Conread position: 1-625
Cow position: chr9:9198834-9199441 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 69

Conread position: 1-634
Cow position: chr9:2496011-2495381 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 308

Conread position: 1-634
Cow position: chr9:30401032-30401642 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 16

Conread position: 1-635
Cow position: chr9:1099324-1099955 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 305

Conread position: 1-635
Cow position: chr9:54995372-54995991 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 307

Conread position: 1-637
Cow position: chr9:1071555-1070921 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 51

Conread position: 1-637
Cow position: chr9:2835265-2834638 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 127

Conread position: 1-637
Cow position: chr9:8952307-8951686 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 313

Conread position: 1-637
Cow position: chr9:30139867-30139255 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 53

Conread position: 1-637
Cow position: chr9:38678859-38679461 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 182

Conread position: 1-637
Cow position: chr9:47044677-47045310 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr9:59196587-59197212 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 307

Conread position: 1-638
Cow position: chr9:35817-35197 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 264

Conread position: 1-640
Cow position: chr9:62444244-62443623 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 133

Conread position: 1-649
Cow position: chr9:3412187-3411519 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 82

Conread position: 1-649
Cow position: chr9:52002363-52001735 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 17

Conread position: 1-651
Cow position: chr9:1998565-1997924 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-654
Cow position: chr9:13472831-13472197 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 1-656
Cow position: chr9:9958450-9957805 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 125

Conread position: 1-656
Cow position: chr9:18507094-18506441 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-656
Cow position: chr9:30282271-30281632 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 167

Conread position: 1-658
Cow position: chr9:21461215-21461844 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 46

Conread position: 1-660
Cow position: chr9:2173266-2173921 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 86

Conread position: 1-660
Cow position: chr9:4940769-4940112 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 215

Conread position: 1-660
Cow position: chr9:5627549-5628207 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-660
Cow position: chr9:19156554-19155904 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 60

Conread position: 1-660
Cow position: chr9:52408588-52407935 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 74

Conread position: 1-662
Cow position: chr9:45876250-45876908 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 85

Conread position: 1-663
Cow position: chr9:791585-790921 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 158

Conread position: 1-663
Cow position: chr9:7104501-7103840 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-663
Cow position: chr9:44168320-44168982 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 138

Conread position: 1-664
Cow position: chr9:778086-777419 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 311

Conread position: 1-664
Cow position: chr9:1991805-1991162 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 169

Conread position: 1-664
Cow position: chr9:2856574-2857235 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 308

Conread position: 1-664
Cow position: chr9:2873204-2873867 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr9:3061321-3061979 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 279

Conread position: 1-664
Cow position: chr9:3545558-3546208 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 8

Conread position: 1-664
Cow position: chr9:3757101-3756447 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr9:5006713-5007357 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 100

Conread position: 1-664
Cow position: chr9:5430197-5430858 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 301

Conread position: 1-664
Cow position: chr9:5452910-5452248 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr9:6252299-6252956 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 91

Conread position: 1-664
Cow position: chr9:6765041-6764377 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 307

Conread position: 1-664
Cow position: chr9:7005449-7006132 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 330

Conread position: 1-664
Cow position: chr9:9015804-9016466 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr9:10567633-10566969 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 306

Conread position: 1-664
Cow position: chr9:10856750-10857424 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr9:13312295-13312949 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 248

Conread position: 1-664
Cow position: chr9:14045405-14046057 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 33

Conread position: 1-664
Cow position: chr9:17303242-17302588 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 122

Conread position: 1-664
Cow position: chr9:17633208-17633879 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 120

Conread position: 1-664
Cow position: chr9:21412042-21412695 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr9:22569834-22570496 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 309

Conread position: 1-664
Cow position: chr9:22655543-22656190 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 107

Conread position: 1-664
Cow position: chr9:26325476-26326137 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr9:27037838-27038505 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr9:28024549-28025212 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-664
Cow position: chr9:28680930-28681592 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr9:31417774-31417124 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 110

Conread position: 1-664
Cow position: chr9:31810308-31810969 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 150

Conread position: 1-664
Cow position: chr9:32972097-32972758 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr9:36845194-36844549 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 278

Conread position: 1-664
Cow position: chr9:37158880-37158220 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr9:37174675-37174013 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr9:42569946-42570607 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 233

Conread position: 1-664
Cow position: chr9:43495864-43496526 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr9:44203339-44202688 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 107

Conread position: 1-664
Cow position: chr9:46627043-46627703 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 98

Conread position: 1-664
Cow position: chr9:46668068-46667406 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 32

Conread position: 1-664
Cow position: chr9:47005471-47006125 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-664
Cow position: chr9:47170776-47171445 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 314

Conread position: 1-664
Cow position: chr9:48795562-48794900 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr9:50840163-50840824 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 289

Conread position: 1-664
Cow position: chr9:54459771-54459110 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 111

Conread position: 1-664
Cow position: chr9:64012499-64011837 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 2-422
Cow position: chr9:23044201-23044614 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 167

Conread position: 2-617
Cow position: chr9:22442222-22442823 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 181

Conread position: 2-624
Cow position: chr9:43643917-43643293 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 59

Conread position: 2-637
Cow position: chr9:218384-217753 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 193

Conread position: 2-637
Cow position: chr9:26054778-26055393 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 75

Conread position: 2-637
Cow position: chr9:55797373-55796743 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 124

Conread position: 2-652
Cow position: chr9:3806329-3806972 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 165

Conread position: 2-660
Cow position: chr9:16178326-16178972 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 43

Conread position: 2-660
Cow position: chr9:40143623-40142965 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 271

Conread position: 2-664
Cow position: chr9:7059331-7058659 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 49

Conread position: 3-268
Cow position: chr9:9261127-9261403 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 187

Conread position: 3-280
Cow position: chr9:36601386-36601674 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 21, 233

Conread position: 3-301
Cow position: chr9:25976263-25976563 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 12

Conread position: 3-487
Cow position: chr9:1249265-1248787 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 306

Conread position: 3-557
Cow position: chr9:10939456-10939997 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 306

Conread position: 3-631
Cow position: chr9:2208936-2208315 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 261

Conread position: 3-651
Cow position: chr9:3998027-3997391 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 245

Conread position: 3-664
Cow position: chr9:1062963-1062304 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 306

Conread position: 3-664
Cow position: chr9:28658317-28657665 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 306

Conread position: 3-664
Cow position: chr9:30674807-30675466 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 306

Conread position: 3-664
Cow position: chr9:59480116-59479465 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 306

Conread position: 4-637
Cow position: chr9:5609028-5608410 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 107

Conread position: 4-664
Cow position: chr9:39303820-39303161 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 305

Conread position: 5-630
Cow position: chr9:15053146-15052534 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 247

Conread position: 5-637
Cow position: chr9:2213881-2214502 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 46

Conread position: 5-648
Cow position: chr9:46525471-46524844 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 56

Conread position: 5-664
Cow position: chr9:6708183-6707526 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 210

Conread position: 9-664
Cow position: chr9:17017491-17018146 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 301

Conread position: 9-664
Cow position: chr9:28785080-28785734 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 302

Conread position: 10-664
Cow position: chr9:52525890-52526543 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 299

Conread position: 22-637
Cow position: chr9:4647882-4647282 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 124

Conread position: 37-338
Cow position: chr9:2288378-2288087 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 188
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 148, 0

Conread position: 37-619
Cow position: chr9:4128173-4127610 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 131

Conread position: 37-634
Cow position: chr9:5516961-5517538 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 70

Conread position: 37-656
Cow position: chr9:13220314-13220921 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 248

Conread position: 37-664
Cow position: chr9:2527059-2527668 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 272

Conread position: 37-664
Cow position: chr9:34059862-34059241 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 267

Conread position: 40-664
Cow position: chr9:20941249-20941869 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 199

Conread position: 42-637
Cow position: chr9:13180693-13181272 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 201

Conread position: 42-664
Cow position: chr9:18071263-18071873 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 74

Conread position: 46-638
Cow position: chr9:62669769-62669190 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 92

Conread position: 50-664
Cow position: chr9:5328562-5327974 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 590, 140

Conread position: 58-649
Cow position: chr9:3222267-3222839 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 64

Conread position: 62-573
Cow position: chr9:22319616-22319117 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 85

Conread position: 71-664
Cow position: chr9:6365183-6365768 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 232

Conread position: 75-630
Cow position: chr9:10110812-10111340 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 7

Conread position: 80-584
Cow position: chr9:36584812-36585291 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 333
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 311, 163

Conread position: 80-664
Cow position: chr9:24918473-24917896 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 223

Conread position: 80-664
Cow position: chr9:29193745-29193179 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 58

Conread position: 87-649
Cow position: chr9:1640077-1640630 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 216

Conread position: 92-664
Cow position: chr9:2548868-2548306 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 212

Conread position: 92-664
Cow position: chr9:38633607-38634171 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 211

Conread position: 94-630
Cow position: chr9:51692791-51692261 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 209

Conread position: 97-634
Cow position: chr9:50775539-50776058 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 134

Conread position: 97-664
Cow position: chr9:45791680-45792240 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 206

Conread position: 99-660
Cow position: chr9:53776535-53777079 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 138

Conread position: 100-637
Cow position: chr9:3217497-3216977 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 28

Conread position: 101-664
Cow position: chr9:37253240-37253796 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 202

Conread position: 102-583
Cow position: chr9:39728780-39728301 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 32

Conread position: 102-637
Cow position: chr9:56862310-56861818 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 40

Conread position: 109-656
Cow position: chr9:51010411-51010917 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 162

Conread position: 111-582
Cow position: chr9:43856691-43856231 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 156

Conread position: 114-529
Cow position: chr9:17587994-17588392 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 28

Conread position: 115-508
Cow position: chr9:2190095-2190483 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 181

Conread position: 116-664
Cow position: chr9:54413756-54413218 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 100

Conread position: 122-664
Cow position: chr9:41313184-41312649 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 181

Conread position: 124-619
Cow position: chr9:40729-40250 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 328
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 261, 70

Conread position: 124-656
Cow position: chr9:10679066-10678545 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 160

Conread position: 127-604
Cow position: chr9:15986871-15987335 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 111

Conread position: 153-551
Cow position: chr9:9021717-9021328 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 150

Conread position: 157-664
Cow position: chr9:1837847-1838342 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 146

Conread position: 163-664
Cow position: chr9:12285809-12285316 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 140

Conread position: 164-660
Cow position: chr9:42868969-42868484 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 18

Conread position: 166-652
Cow position: chr9:18109602-18110077 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 137

Conread position: 167-650
Cow position: chr9:29337811-29338283 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 12

Conread position: 168-509
Cow position: chr9:37181765-37182098 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 135

Conread position: 172-654
Cow position: chr9:36506062-36506531 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 308
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 219, 130

Conread position: 183-664
Cow position: chr9:13187122-13187596 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 120

Conread position: 184-630
Cow position: chr9:62764386-62763952 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 5

Conread position: 184-664
Cow position: chr9:17061437-17060966 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 50

Conread position: 184-664
Cow position: chr9:34238840-34238367 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 119

Conread position: 190-660
Cow position: chr9:50326623-50327084 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 59

Conread position: 194-490
Cow position: chr9:31124005-31124289 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 109

Conread position: 195-658
Cow position: chr9:13492684-13493124 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 14

Conread position: 201-654
Cow position: chr9:9210079-9210525 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 102

Conread position: 201-664
Cow position: chr9:18830676-18831124 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 102

Conread position: 201-664
Cow position: chr9:33843260-33843715 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 62

Conread position: 203-637
Cow position: chr9:382951-382531 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 100

Conread position: 205-574
Cow position: chr9:9871879-9872239 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 98

Conread position: 208-664
Cow position: chr9:1519540-1519973 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 24

Conread position: 211-617
Cow position: chr9:854931-855336 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 264
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 8

Conread position: 213-631
Cow position: chr9:44580276-44579864 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 283
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 54, 91

Conread position: 216-660
Cow position: chr9:28702400-28702838 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 309
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 13, 88

Conread position: 219-532
Cow position: chr9:2677268-2676973 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 172, 11

Conread position: 219-649
Cow position: chr9:4284179-4284597 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 284
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 172, 10

Conread position: 222-664
Cow position: chr9:51178712-51178276 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 82

Conread position: 223-656
Cow position: chr9:23297948-23297528 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 286
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 165, 32

Conread position: 225-637
Cow position: chr9:174813-174411 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 78

Conread position: 226-664
Cow position: chr9:27781951-27781520 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 77

Conread position: 230-630
Cow position: chr9:9491976-9491600 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 64

Conread position: 230-637
Cow position: chr9:34900431-34900833 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 72

Conread position: 232-508
Cow position: chr9:60589738-60589998 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 119, 71

Conread position: 235-664
Cow position: chr9:59496213-59495791 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 68

Conread position: 236-660
Cow position: chr9:47263002-47263426 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 288
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 144, 54

Conread position: 243-458
Cow position: chr9:1740734-1740533 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 148, 60

Conread position: 243-664
Cow position: chr9:19545489-19545902 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 60

Conread position: 250-664
Cow position: chr9:4673047-4673447 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 53

Conread position: 257-520
Cow position: chr9:44920229-44920481 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 134, 46

Conread position: 271-487
Cow position: chr9:9357166-9357379 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 32

Conread position: 287-556
Cow position: chr9:34460593-34460321 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 104, 7

Conread position: 305-631
Cow position: chr9:2222695-2223020 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 228
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 63

Conread position: 309-649
Cow position: chr9:34688514-34688840 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 234
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 134

Conread position: 310-636
Cow position: chr9:64562242-64562565 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 96

Conread position: 310-637
Cow position: chr9:5533893-5533577 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 82, 51

Conread position: 311-619
Cow position: chr9:43320687-43320378 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 207
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 71

Conread position: 313-660
Cow position: chr9:12161630-12161984 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 135

Conread position: 316-660
Cow position: chr9:49034001-49034330 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 227
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 73

Conread position: 317-533
Cow position: chr9:26077827-26077618 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 99

Conread position: 319-529
Cow position: chr9:15802440-15802654 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 72, 120

Conread position: 319-531
Cow position: chr9:59167681-59167465 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 72, 40

Conread position: 319-532
Cow position: chr9:50003764-50003981 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 70, 119

Conread position: 319-637
Cow position: chr9:18710534-18710855 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-637
Cow position: chr9:60409443-60409765 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-648
Cow position: chr9:35023006-35023329 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 216
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 30

Conread position: 319-649
Cow position: chr9:1850602-1850277 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 80

Conread position: 319-649
Cow position: chr9:22803611-22803276 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 131

Conread position: 319-649
Cow position: chr9:33056824-33057159 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 118

Conread position: 319-649
Cow position: chr9:34917660-34917990 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 119

Conread position: 319-654
Cow position: chr9:5887350-5887014 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 175

Conread position: 319-656
Cow position: chr9:10672293-10671960 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 55

Conread position: 319-664
Cow position: chr9:3052306-3052657 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-664
Cow position: chr9:8282227-8281878 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 97

Conread position: 319-664
Cow position: chr9:35565499-35565147 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 121

Conread position: 319-664
Cow position: chr9:35624355-35624706 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-664
Cow position: chr9:36830011-36829660 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 131

Conread position: 319-664
Cow position: chr9:43494089-43494440 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-664
Cow position: chr9:62818180-62817829 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 320-649
Cow position: chr9:34567690-34568020 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 160, 94

Conread position: 321-637
Cow position: chr9:63563457-63563783 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 197

Conread position: 321-660
Cow position: chr9:31411686-31411348 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 225
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 84, 64

Conread position: 323-664
Cow position: chr9:49981549-49981888 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 50

Conread position: 326-532
Cow position: chr9:25596700-25596909 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 63, 113

Conread position: 326-556
Cow position: chr9:4191329-4191563 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 65, 113

Conread position: 326-635
Cow position: chr9:25548107-25547793 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 115

Conread position: 326-664
Cow position: chr9:772198-771856 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 110

Conread position: 327-649
Cow position: chr9:23028967-23028653 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 232
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 159, 37

Conread position: 327-664
Cow position: chr9:2618748-2618393 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 112

Conread position: 328-582
Cow position: chr9:58747768-58747514 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 109

Conread position: 328-616
Cow position: chr9:11286841-11286559 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 189
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 98

Conread position: 331-619
Cow position: chr9:24996429-24996706 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 23

Conread position: 332-651
Cow position: chr9:1983429-1983746 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 62

Conread position: 332-664
Cow position: chr9:1259486-1259828 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 107

Conread position: 335-664
Cow position: chr9:4552864-4553185 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 80

Conread position: 340-649
Cow position: chr9:54996936-54997250 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 51, 15

Conread position: 341-664
Cow position: chr9:55031568-55031896 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 89

Conread position: 342-622
Cow position: chr9:5059018-5058732 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 49, 95

Conread position: 345-664
Cow position: chr9:34690463-34690142 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 94

Conread position: 347-645
Cow position: chr9:1307283-1306979 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 91

Conread position: 351-658
Cow position: chr9:9623015-9623319 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 234, 21

Conread position: 354-651
Cow position: chr9:50728141-50727841 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 35, 103

Conread position: 360-637
Cow position: chr9:44820968-44821247 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 79

Conread position: 365-659
Cow position: chr9:30737426-30737129 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 73

Conread position: 369-664
Cow position: chr9:59539003-59539294 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 15

Conread position: 371-664
Cow position: chr9:40316229-40316526 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 69

Conread position: 375-637
Cow position: chr9:26576798-26577054 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 16, 63

Conread position: 382-660
Cow position: chr9:3388717-3388440 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 118, 25

Conread position: 388-664
Cow position: chr9:22755812-22755537 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 94, 50

Conread position: 389-522
Cow position: chr9:15214647-15214783 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 8, 59

Conread position: 391-664
Cow position: chr9:43302486-43302212 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 98, 37

Conread position: 403-606
Cow position: chr9:29826352-29826158 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 403-664
Cow position: chr9:47883156-47882897 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 236, 35

Conread position: 407-664
Cow position: chr9:6304566-6304828 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 73, 40

Conread position: 416-653
Cow position: chr9:36621861-36622097 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 66, 30

Conread position: 439-637
Cow position: chr9:51556135-51556330 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 441-654
Cow position: chr9:17993186-17992973 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 70

Conread position: 444-637
Cow position: chr9:8386987-8387183 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 45, 71

Conread position: 447-660
Cow position: chr9:10326403-10326621 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 42, 68

Conread position: 452-664
Cow position: chr9:5414877-5414659 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 28, 64

Conread position: 465-656
Cow position: chr9:64054640-64054826 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 0

Conread position: 466-634
Cow position: chr9:34554050-34553879 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 44

Conread position: 472-664
Cow position: chr9:1856650-1856458 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 481-625
Cow position: chr9:58133395-58133252 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 498-640
Cow position: chr9:60590015-60590152 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 502-656
Cow position: chr9:44624139-44623983 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 125, 9

Conread position: 508-649
Cow position: chr9:9357377-9357518 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.