Cow genome map

Conread name: Pig4-TMW8006O17

Conread position: 1-270
Cow position: chrX:4481337-4481612 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 1-295
Cow position: chrX:38150238-38150533 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 285

Conread position: 1-426
Cow position: chrX:24444417-24443997 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-470
Cow position: chrX:32129418-32129878 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 201

Conread position: 1-487
Cow position: chrX:16045610-16046091 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 289

Conread position: 1-487
Cow position: chrX:29171142-29170663 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 162

Conread position: 1-499
Cow position: chrX:27595588-27595092 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 283

Conread position: 1-507
Cow position: chrX:21892146-21892650 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-507
Cow position: chrX:24734308-24734803 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 36

Conread position: 1-509
Cow position: chrX:33829683-33830180 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 133

Conread position: 1-532
Cow position: chrX:16854727-16854200 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 306

Conread position: 1-532
Cow position: chrX:30435980-30435451 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-558
Cow position: chrX:40828463-40827919 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 74

Conread position: 1-574
Cow position: chrX:21832529-21833092 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 302

Conread position: 1-586
Cow position: chrX:26756001-26755422 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-590
Cow position: chrX:16804227-16803643 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 307

Conread position: 1-597
Cow position: chrX:27497470-27498060 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 257

Conread position: 1-598
Cow position: chrX:25450974-25451568 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 306

Conread position: 1-607
Cow position: chrX:22492675-22493272 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 164

Conread position: 1-619
Cow position: chrX:9095281-9095895 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-619
Cow position: chrX:27983715-27983101 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 311

Conread position: 1-619
Cow position: chrX:39697407-39698014 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 307

Conread position: 1-620
Cow position: chrX:23279665-23280278 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-622
Cow position: chrX:4327050-4326426 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 87

Conread position: 1-622
Cow position: chrX:22612048-22612659 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 114

Conread position: 1-622
Cow position: chrX:26507894-26508483 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 32

Conread position: 1-625
Cow position: chrX:15122523-15121902 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 197

Conread position: 1-629
Cow position: chrX:32328848-32329471 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 1-629
Cow position: chrX:34094344-34094969 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-630
Cow position: chrX:8482088-8482711 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 51

Conread position: 1-630
Cow position: chrX:13929095-13928478 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 131

Conread position: 1-632
Cow position: chrX:26617769-26618390 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 138

Conread position: 1-634
Cow position: chrX:30059536-30060157 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 272

Conread position: 1-635
Cow position: chrX:4413523-4414133 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 75

Conread position: 1-635
Cow position: chrX:23222388-23221776 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 275

Conread position: 1-636
Cow position: chrX:37851776-37852406 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 303

Conread position: 1-637
Cow position: chrX:2579059-2579690 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 268

Conread position: 1-637
Cow position: chrX:3406698-3406070 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 14

Conread position: 1-637
Cow position: chrX:4623315-4622682 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chrX:5360648-5361281 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chrX:8435560-8434932 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chrX:8640426-8641059 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chrX:9010972-9011598 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 158

Conread position: 1-637
Cow position: chrX:11743910-11744538 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 142

Conread position: 1-637
Cow position: chrX:17891183-17891817 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 96

Conread position: 1-637
Cow position: chrX:18489087-18488443 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 170

Conread position: 1-637
Cow position: chrX:21343034-21343666 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 251

Conread position: 1-637
Cow position: chrX:28587620-28588242 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 267

Conread position: 1-637
Cow position: chrX:28753698-28753069 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 308

Conread position: 1-637
Cow position: chrX:29911978-29912610 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 309

Conread position: 1-637
Cow position: chrX:30137218-30136599 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 159

Conread position: 1-637
Cow position: chrX:31495376-31496007 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 113

Conread position: 1-637
Cow position: chrX:33537238-33537846 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 100

Conread position: 1-637
Cow position: chrX:39561021-39560381 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 14

Conread position: 1-638
Cow position: chrX:3581576-3582219 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 216

Conread position: 1-638
Cow position: chrX:16035869-16035243 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 134

Conread position: 1-651
Cow position: chrX:6044808-6044186 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 137

Conread position: 1-652
Cow position: chrX:22579738-22579099 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 60

Conread position: 1-653
Cow position: chrX:29791165-29790532 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 128

Conread position: 1-654
Cow position: chrX:7572029-7572676 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-656
Cow position: chrX:2479990-2479331 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-656
Cow position: chrX:16781922-16782576 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 287

Conread position: 1-656
Cow position: chrX:23039343-23038697 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 14

Conread position: 1-656
Cow position: chrX:27070474-27071134 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 212

Conread position: 1-656
Cow position: chrX:28879938-28879302 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 198

Conread position: 1-656
Cow position: chrX:30090394-30089754 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 72

Conread position: 1-656
Cow position: chrX:32145618-32144972 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-660
Cow position: chrX:6236200-6235560 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 76

Conread position: 1-660
Cow position: chrX:10867211-10866574 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 124

Conread position: 1-660
Cow position: chrX:16278298-16278948 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 132

Conread position: 1-660
Cow position: chrX:18951092-18950440 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 100

Conread position: 1-660
Cow position: chrX:20652063-20652711 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 72

Conread position: 1-660
Cow position: chrX:20800427-20801077 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-660
Cow position: chrX:22810534-22811186 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 194

Conread position: 1-660
Cow position: chrX:24770218-24769561 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-660
Cow position: chrX:27591382-27590734 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 215

Conread position: 1-660
Cow position: chrX:29099058-29099713 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 158

Conread position: 1-660
Cow position: chrX:37080876-37080223 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-662
Cow position: chrX:16710606-16711254 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 217

Conread position: 1-662
Cow position: chrX:31201479-31202139 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-663
Cow position: chrX:7484445-7485106 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-663
Cow position: chrX:21389216-21389877 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 308

Conread position: 1-664
Cow position: chrX:1549604-1550265 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 6

Conread position: 1-664
Cow position: chrX:2382104-2382766 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 113

Conread position: 1-664
Cow position: chrX:2560309-2559660 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 190

Conread position: 1-664
Cow position: chrX:2813837-2813182 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 273

Conread position: 1-664
Cow position: chrX:3373213-3372553 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 128

Conread position: 1-664
Cow position: chrX:4342390-4343051 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 244

Conread position: 1-664
Cow position: chrX:4906357-4905690 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 316

Conread position: 1-664
Cow position: chrX:5332793-5332133 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:5354662-5354003 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:5865784-5866446 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:6580573-6581234 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:7552163-7551501 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:7754545-7755205 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 14

Conread position: 1-664
Cow position: chrX:9127693-9128356 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:9169967-9169314 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:10529146-10528486 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 50

Conread position: 1-664
Cow position: chrX:11146698-11146033 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 310

Conread position: 1-664
Cow position: chrX:11409696-11409034 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:11462355-11461696 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 50

Conread position: 1-664
Cow position: chrX:11976808-11976146 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-664
Cow position: chrX:12144737-12145402 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:12308124-12307462 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:13406648-13405990 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 307

Conread position: 1-664
Cow position: chrX:14125606-14124946 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 113

Conread position: 1-664
Cow position: chrX:14597495-14598146 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 257

Conread position: 1-664
Cow position: chrX:14782707-14782045 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:15260977-15260319 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:15621893-15621232 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:16041038-16040379 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 205

Conread position: 1-664
Cow position: chrX:16360364-16359707 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 132

Conread position: 1-664
Cow position: chrX:16525442-16526090 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 105

Conread position: 1-664
Cow position: chrX:16702321-16702971 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 217

Conread position: 1-664
Cow position: chrX:16809174-16808514 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 307

Conread position: 1-664
Cow position: chrX:17054209-17054869 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 156

Conread position: 1-664
Cow position: chrX:17782143-17782800 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 119

Conread position: 1-664
Cow position: chrX:18024354-18023692 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:18222051-18222713 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 312

Conread position: 1-664
Cow position: chrX:18657166-18656505 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 307

Conread position: 1-664
Cow position: chrX:19398416-19399078 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:19474510-19473859 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:19608315-19608976 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 158

Conread position: 1-664
Cow position: chrX:20357361-20356695 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:21582080-21582743 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-664
Cow position: chrX:21591931-21592591 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 305

Conread position: 1-664
Cow position: chrX:21793229-21793891 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 158

Conread position: 1-664
Cow position: chrX:22077702-22077042 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:22539396-22538733 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:22565046-22564387 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-664
Cow position: chrX:23021950-23022613 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 314

Conread position: 1-664
Cow position: chrX:23134235-23134879 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:23395245-23395907 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:23573169-23572516 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 32

Conread position: 1-664
Cow position: chrX:24468483-24467824 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 175

Conread position: 1-664
Cow position: chrX:24589089-24588436 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 130

Conread position: 1-664
Cow position: chrX:26231120-26230458 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:26274784-26275438 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 50

Conread position: 1-664
Cow position: chrX:26442608-26441960 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 76

Conread position: 1-664
Cow position: chrX:26446738-26447379 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 235

Conread position: 1-664
Cow position: chrX:26530614-26531273 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 204

Conread position: 1-664
Cow position: chrX:27304569-27305229 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 301

Conread position: 1-664
Cow position: chrX:27317869-27318531 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:27423630-27422983 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 101

Conread position: 1-664
Cow position: chrX:27978192-27977534 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 67

Conread position: 1-664
Cow position: chrX:29225116-29225778 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:29916707-29916046 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 133

Conread position: 1-664
Cow position: chrX:30053830-30053168 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:30181286-30180627 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:30229473-30228814 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 240

Conread position: 1-664
Cow position: chrX:30836025-30836687 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:30965348-30964686 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:31979201-31978541 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 289

Conread position: 1-664
Cow position: chrX:32064529-32063871 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:35532494-35533154 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 312

Conread position: 1-664
Cow position: chrX:36194734-36195392 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:36536091-36535435 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:39548041-39548699 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 162

Conread position: 1-664
Cow position: chrX:39713190-39713851 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 14

Conread position: 1-664
Cow position: chrX:41155950-41156611 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chrX:41847895-41847230 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 174

Conread position: 1-664
Cow position: chrX:42223116-42222475 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 135

Conread position: 2-526
Cow position: chrX:6855047-6854558 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 92

Conread position: 2-533
Cow position: chrX:12997276-12996743 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 312

Conread position: 2-561
Cow position: chrX:24321988-24321432 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 88

Conread position: 2-637
Cow position: chrX:22818714-22819349 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 110

Conread position: 2-656
Cow position: chrX:30166021-30165375 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 307

Conread position: 2-660
Cow position: chrX:30164591-30163942 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 196

Conread position: 2-660
Cow position: chrX:40070963-40070314 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 171

Conread position: 2-664
Cow position: chrX:672351-671693 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 299

Conread position: 2-664
Cow position: chrX:21226119-21226777 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 269

Conread position: 3-459
Cow position: chrX:12185738-12186188 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 307

Conread position: 3-464
Cow position: chrX:18462990-18463446 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 307

Conread position: 3-493
Cow position: chrX:37487587-37488076 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 310

Conread position: 3-512
Cow position: chrX:5294702-5294200 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 229

Conread position: 3-592
Cow position: chrX:7120247-7120833 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 306

Conread position: 3-637
Cow position: chrX:5649746-5649132 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 130

Conread position: 3-637
Cow position: chrX:29908561-29907931 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 309

Conread position: 3-660
Cow position: chrX:24412668-24413326 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 3-664
Cow position: chrX:15978311-15977653 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 306

Conread position: 3-664
Cow position: chrX:24483722-24483067 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 306

Conread position: 4-435
Cow position: chrX:11458172-11457747 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 304

Conread position: 4-649
Cow position: chrX:28132745-28133380 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 100

Conread position: 4-656
Cow position: chrX:36839357-36839998 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 128

Conread position: 5-637
Cow position: chrX:7096101-7096729 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 304

Conread position: 5-638
Cow position: chrX:27754067-27754699 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 307

Conread position: 5-650
Cow position: chrX:28625111-28624475 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 129

Conread position: 5-659
Cow position: chrX:25818172-25817527 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 68

Conread position: 5-664
Cow position: chrX:322558-323215 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 304

Conread position: 5-664
Cow position: chrX:2047759-2048412 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 126

Conread position: 5-664
Cow position: chrX:38962205-38961550 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 129

Conread position: 7-660
Cow position: chrX:5248036-5248681 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 163

Conread position: 7-664
Cow position: chrX:5321069-5320418 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 276

Conread position: 9-664
Cow position: chrX:3360468-3361121 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 268

Conread position: 9-664
Cow position: chrX:29880632-29879980 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 125

Conread position: 10-625
Cow position: chrX:26623158-26622563 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 277

Conread position: 10-664
Cow position: chrX:5290037-5289386 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 299

Conread position: 10-664
Cow position: chrX:24293016-24292379 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 290

Conread position: 12-664
Cow position: chrX:31728125-31728761 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 40

Conread position: 13-637
Cow position: chrX:24345699-24346320 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 296

Conread position: 14-664
Cow position: chrX:12359537-12360188 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 278

Conread position: 29-651
Cow position: chrX:29759373-29759975 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 234

Conread position: 37-426
Cow position: chrX:11951091-11950712 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 267

Conread position: 37-487
Cow position: chrX:9836592-9837033 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 40

Conread position: 37-634
Cow position: chrX:2299574-2300149 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 131

Conread position: 37-634
Cow position: chrX:19541667-19541079 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 373
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 20, 177

Conread position: 37-637
Cow position: chrX:14462000-14462585 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 235

Conread position: 37-637
Cow position: chrX:21767483-21768075 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 91

Conread position: 37-651
Cow position: chrX:34221459-34222053 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 96

Conread position: 37-656
Cow position: chrX:41885498-41884894 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 267

Conread position: 37-660
Cow position: chrX:29082755-29083363 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 114

Conread position: 37-664
Cow position: chrX:38231588-38230967 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 267

Conread position: 41-664
Cow position: chrX:23342307-23341692 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 262

Conread position: 42-651
Cow position: chrX:33583372-33583977 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 36

Conread position: 60-489
Cow position: chrX:13415728-13415325 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 107

Conread position: 68-599
Cow position: chrX:24446665-24447185 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 235

Conread position: 71-574
Cow position: chrX:5375562-5375069 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 196

Conread position: 71-637
Cow position: chrX:29287710-29288264 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 234

Conread position: 71-637
Cow position: chrX:30200273-30199721 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 123

Conread position: 71-664
Cow position: chrX:23387821-23387238 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 234

Conread position: 71-664
Cow position: chrX:27615527-27616108 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 230

Conread position: 72-532
Cow position: chrX:20741573-20742019 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 89

Conread position: 75-621
Cow position: chrX:43074605-43075138 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 70

Conread position: 80-631
Cow position: chrX:3650104-3649558 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 255

Conread position: 81-487
Cow position: chrX:9535262-9535661 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 231

Conread position: 82-663
Cow position: chrX:23985976-23986549 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 11

Conread position: 85-663
Cow position: chrX:18193418-18193989 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 218

Conread position: 86-497
Cow position: chrX:15349484-15349084 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 217

Conread position: 89-654
Cow position: chrX:18247090-18247643 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 41

Conread position: 90-624
Cow position: chrX:5365858-5365336 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 119

Conread position: 91-654
Cow position: chrX:35938325-35937787 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 36

Conread position: 92-664
Cow position: chrX:20953272-20953833 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 151

Conread position: 93-664
Cow position: chrX:5647368-5646804 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 210

Conread position: 93-664
Cow position: chrX:21661754-21662336 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 100

Conread position: 100-664
Cow position: chrX:21685353-21685919 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 207

Conread position: 101-651
Cow position: chrX:25282750-25282206 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 128

Conread position: 101-664
Cow position: chrX:21414611-21415167 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 202

Conread position: 102-651
Cow position: chrX:35287171-35287712 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 51

Conread position: 103-630
Cow position: chrX:6279854-6279343 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 26

Conread position: 105-619
Cow position: chrX:6656269-6655783 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 158

Conread position: 106-487
Cow position: chrX:22616622-22616253 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 197

Conread position: 106-664
Cow position: chrX:9642679-9642132 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 137

Conread position: 106-664
Cow position: chrX:21818699-21818181 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 534, 47

Conread position: 107-660
Cow position: chrX:34760816-34761362 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 196

Conread position: 107-664
Cow position: chrX:44193685-44193140 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 15

Conread position: 108-637
Cow position: chrX:14802068-14801549 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 196

Conread position: 115-664
Cow position: chrX:6371938-6372480 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 188

Conread position: 115-664
Cow position: chrX:16085900-16085358 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 188

Conread position: 117-664
Cow position: chrX:27758469-27759007 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 186

Conread position: 119-664
Cow position: chrX:30172944-30172407 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 184

Conread position: 120-664
Cow position: chrX:15151904-15151375 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 81

Conread position: 121-660
Cow position: chrX:38228547-38228017 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 127

Conread position: 121-664
Cow position: chrX:29849853-29849329 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 182

Conread position: 122-664
Cow position: chrX:20020337-20020879 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 168

Conread position: 123-656
Cow position: chrX:28633688-28633179 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 180

Conread position: 123-660
Cow position: chrX:36691614-36692130 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 59

Conread position: 123-664
Cow position: chrX:22869585-22870122 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 180

Conread position: 127-533
Cow position: chrX:9228131-9227735 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 85

Conread position: 145-634
Cow position: chrX:9899548-9899076 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 157

Conread position: 147-426
Cow position: chrX:27028923-27029188 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 16

Conread position: 151-656
Cow position: chrX:22809059-22809545 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 152

Conread position: 151-664
Cow position: chrX:39556977-39556495 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 58

Conread position: 152-664
Cow position: chrX:42732667-42733172 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 151

Conread position: 153-636
Cow position: chrX:6453494-6453967 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 150

Conread position: 154-664
Cow position: chrX:14050396-14049894 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 149

Conread position: 157-583
Cow position: chrX:33173355-33172945 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 286
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 233, 72

Conread position: 161-625
Cow position: chrX:6201337-6201786 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 143

Conread position: 161-637
Cow position: chrX:45401198-45400746 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 143

Conread position: 161-664
Cow position: chrX:34442624-34442142 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 478, 142

Conread position: 170-637
Cow position: chrX:16087310-16086852 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 133

Conread position: 170-664
Cow position: chrX:16325712-16325228 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 27

Conread position: 171-637
Cow position: chrX:1617415-1616963 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 100

Conread position: 172-637
Cow position: chrX:20503458-20503911 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 131

Conread position: 175-461
Cow position: chrX:37186700-37186971 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 179-371
Cow position: chrX:21254041-21254220 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 124, 0

Conread position: 184-637
Cow position: chrX:13178779-13178336 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 119

Conread position: 184-637
Cow position: chrX:16465134-16465572 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 119

Conread position: 184-664
Cow position: chrX:2103232-2103705 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 119

Conread position: 187-637
Cow position: chrX:15140700-15140265 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 114

Conread position: 188-628
Cow position: chrX:17890020-17889598 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 115

Conread position: 193-637
Cow position: chrX:45374263-45373837 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 66

Conread position: 194-553
Cow position: chrX:2145815-2146160 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 241
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 202, 31

Conread position: 194-637
Cow position: chrX:2705528-2705080 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 299
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 26, 56

Conread position: 194-664
Cow position: chrX:17664078-17663619 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 109

Conread position: 195-488
Cow position: chrX:37815017-37815297 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 108

Conread position: 195-607
Cow position: chrX:730483-730088 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 272
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 196, 40

Conread position: 195-664
Cow position: chrX:10445575-10445115 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 95

Conread position: 201-664
Cow position: chrX:23452603-23452145 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 102

Conread position: 202-529
Cow position: chrX:10439063-10438744 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 74

Conread position: 202-630
Cow position: chrX:28647424-28647006 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 50

Conread position: 202-630
Cow position: chrX:47380666-47380236 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 124

Conread position: 203-664
Cow position: chrX:36729230-36729684 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 100

Conread position: 205-426
Cow position: chrX:29482889-29482678 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 26, 99

Conread position: 205-664
Cow position: chrX:30455768-30455322 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 98

Conread position: 213-664
Cow position: chrX:32643342-32643786 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 90

Conread position: 213-664
Cow position: chrX:34553612-34554044 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 33

Conread position: 214-664
Cow position: chrX:11499917-11499476 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 89

Conread position: 215-461
Cow position: chrX:25292221-25291987 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 176, 88

Conread position: 215-549
Cow position: chrX:29930534-29930209 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 88

Conread position: 215-649
Cow position: chrX:6406215-6406634 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 30

Conread position: 215-664
Cow position: chrX:25289821-25289379 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 88

Conread position: 220-631
Cow position: chrX:20674731-20675133 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 83

Conread position: 220-664
Cow position: chrX:40693868-40693429 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 31

Conread position: 231-630
Cow position: chrX:24310224-24309839 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 280
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 158, 5

Conread position: 235-656
Cow position: chrX:18243871-18244277 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 68

Conread position: 237-664
Cow position: chrX:5334933-5334515 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 66

Conread position: 239-664
Cow position: chrX:8590462-8590881 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 63

Conread position: 241-660
Cow position: chrX:38852047-38852455 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 60

Conread position: 243-591
Cow position: chrX:39352725-39352396 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 246
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 148, 60

Conread position: 244-664
Cow position: chrX:10059353-10059765 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 59

Conread position: 246-664
Cow position: chrX:17994351-17994759 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 57

Conread position: 248-637
Cow position: chrX:17290073-17290451 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 56

Conread position: 249-637
Cow position: chrX:37404337-37403963 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 54

Conread position: 249-664
Cow position: chrX:33685023-33685431 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 54

Conread position: 258-637
Cow position: chrX:12310484-12310118 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 45

Conread position: 260-637
Cow position: chrX:41791816-41791444 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 43

Conread position: 266-651
Cow position: chrX:22118585-22118209 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 35

Conread position: 267-664
Cow position: chrX:5280956-5280553 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 75

Conread position: 282-637
Cow position: chrX:16046063-16046418 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 92

Conread position: 286-664
Cow position: chrX:3465160-3464777 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 132

Conread position: 303-663
Cow position: chrX:29029770-29029405 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 249
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 120

Conread position: 303-664
Cow position: chrX:3418205-3417837 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 138

Conread position: 310-637
Cow position: chrX:30160048-30159720 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 10

Conread position: 312-637
Cow position: chrX:29700999-29700681 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 125

Conread position: 318-518
Cow position: chrX:24928394-24928190 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 73, 121

Conread position: 319-529
Cow position: chrX:29047064-29047278 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 111

Conread position: 319-598
Cow position: chrX:3652623-3652899 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 19

Conread position: 319-598
Cow position: chrX:9764122-9763840 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-622
Cow position: chrX:15306924-15306616 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 128

Conread position: 319-634
Cow position: chrX:7810044-7809730 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 212
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 101

Conread position: 319-635
Cow position: chrX:15175600-15175283 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 92

Conread position: 319-636
Cow position: chrX:28058271-28058592 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-637
Cow position: chrX:2500681-2500360 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 119

Conread position: 319-637
Cow position: chrX:10440882-10440555 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 212
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 72, 101

Conread position: 319-637
Cow position: chrX:22838221-22838543 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-637
Cow position: chrX:33763094-33763416 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-637
Cow position: chrX:33804037-33803724 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 103

Conread position: 319-637
Cow position: chrX:40225285-40224973 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 119

Conread position: 319-651
Cow position: chrX:22330601-22330278 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 217
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 134

Conread position: 319-660
Cow position: chrX:26760619-26760272 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 120

Conread position: 319-664
Cow position: chrX:12345845-12346196 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 120

Conread position: 319-664
Cow position: chrX:28503285-28503636 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-664
Cow position: chrX:29892033-29892387 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 128

Conread position: 319-664
Cow position: chrX:32584981-32584631 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 130

Conread position: 319-664
Cow position: chrX:38150638-38150988 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 84

Conread position: 319-664
Cow position: chrX:39185122-39185473 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 120

Conread position: 319-664
Cow position: chrX:46296611-46296960 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 119

Conread position: 320-529
Cow position: chrX:21750292-21750082 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 68, 110

Conread position: 320-619
Cow position: chrX:24279867-24280173 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 132

Conread position: 320-628
Cow position: chrX:47986448-47986761 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 73, 55

Conread position: 320-660
Cow position: chrX:35024019-35024355 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 119

Conread position: 322-651
Cow position: chrX:22887614-22887946 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 127

Conread position: 326-573
Cow position: chrX:9261370-9261614 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 65, 137

Conread position: 326-616
Cow position: chrX:40184029-40184323 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 124

Conread position: 326-630
Cow position: chrX:15040106-15039805 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 163, 64

Conread position: 326-630
Cow position: chrX:47000697-47000389 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 77, 125

Conread position: 326-637
Cow position: chrX:20792095-20792407 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 64, 115

Conread position: 326-637
Cow position: chrX:27451088-27450778 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 65, 17

Conread position: 326-649
Cow position: chrX:44901100-44901420 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 224
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 65, 114

Conread position: 326-664
Cow position: chrX:29722167-29722519 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 113

Conread position: 326-664
Cow position: chrX:39701823-39702154 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 92

Conread position: 327-651
Cow position: chrX:2649393-2649063 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 191

Conread position: 327-660
Cow position: chrX:40560581-40560244 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 50

Conread position: 327-664
Cow position: chrX:27095094-27095429 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 94

Conread position: 329-637
Cow position: chrX:28518761-28518449 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 113

Conread position: 331-637
Cow position: chrX:35608955-35609257 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 99

Conread position: 332-664
Cow position: chrX:13031688-13031352 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 107

Conread position: 336-664
Cow position: chrX:13205921-13206252 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 103

Conread position: 340-514
Cow position: chrX:28766138-28765959 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 109

Conread position: 342-651
Cow position: chrX:12289702-12290009 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 37

Conread position: 343-506
Cow position: chrX:2933029-2932861 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 46, 96

Conread position: 346-649
Cow position: chrX:18455794-18455486 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 56

Conread position: 346-658
Cow position: chrX:1056411-1056092 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 103

Conread position: 349-637
Cow position: chrX:39731158-39730868 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 90

Conread position: 349-664
Cow position: chrX:12178653-12178979 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 100

Conread position: 354-637
Cow position: chrX:2486648-2486361 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 95

Conread position: 354-651
Cow position: chrX:28867031-28866725 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 37, 83

Conread position: 363-488
Cow position: chrX:21645795-21645670 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 28, 75

Conread position: 363-660
Cow position: chrX:30135349-30135051 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 75

Conread position: 366-664
Cow position: chrX:44053812-44054105 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 72

Conread position: 369-631
Cow position: chrX:17158808-17158546 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 48

Conread position: 369-635
Cow position: chrX:41879920-41879647 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 21, 47

Conread position: 371-629
Cow position: chrX:4995617-4995873 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 67

Conread position: 375-664
Cow position: chrX:21254784-21255076 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 74

Conread position: 379-656
Cow position: chrX:6766723-6766444 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 105, 59

Conread position: 390-660
Cow position: chrX:37134611-37134337 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 57

Conread position: 396-656
Cow position: chrX:37832426-37832176 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 243, 42

Conread position: 412-615
Cow position: chrX:45042472-45042679 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 66, 35

Conread position: 414-637
Cow position: chrX:24442194-24441968 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 20, 8

Conread position: 439-664
Cow position: chrX:865465-865696 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 8, 77

Conread position: 441-660
Cow position: chrX:27704671-27704894 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 75

Conread position: 447-660
Cow position: chrX:11950408-11950190 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 42, 64

Conread position: 447-664
Cow position: chrX:18898571-18898349 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 174
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 42, 68

Conread position: 447-664
Cow position: chrX:35239950-35240166 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 42, 64

Conread position: 448-637
Cow position: chrX:35847311-35847496 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 463-637
Cow position: chrX:7805480-7805650 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 469-664
Cow position: chrX:25459539-25459338 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 20, 46

Conread position: 473-649
Cow position: chrX:35388812-35388634 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 9, 40

Conread position: 488-664
Cow position: chrX:19657620-19657797 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 151, 23

Conread position: 494-649
Cow position: chrX:8104152-8103999 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 496-664
Cow position: chrX:16688399-16688568 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 143, 15

Show alignments to all cow chromosomes.