Cow genome map
| Conread name: | Pig4-TMW8008H19 |
| Conread position: | 1-168 |
| Cow position: | chr12:21198936-21199097 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-286 |
| Cow position: | chr12:11871246-11871529 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 171, 37 |
| Conread position: | 1-304 |
| Cow position: | chr12:43030410-43030098 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 58, 177 |
| Conread position: | 1-336 |
| Cow position: | chr12:21428840-21429186 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 179, 42 |
| Conread position: | 1-496 |
| Cow position: | chr12:25262492-25261990 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 310 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 178, 40 |
| Conread position: | 1-644 |
| Cow position: | chr12:17979710-17980354 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 41 |
| Conread position: | 1-681 |
| Cow position: | chr12:21942706-21943418 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 42 |
| Conread position: | 1-685 |
| Cow position: | chr12:3361901-3362614 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 488 |
| Conread position: | 1-690 |
| Cow position: | chr12:1403468-1404180 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 46 |
| Conread position: | 1-690 |
| Cow position: | chr12:23141221-23140489 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 344 |
| Conread position: | 1-690 |
| Cow position: | chr12:27854990-27854280 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 46 |
| Conread position: | 1-690 |
| Cow position: | chr12:27931934-27931224 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 382 |
| Conread position: | 1-690 |
| Cow position: | chr12:28004901-28005558 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 46 |
| Conread position: | 1-690 |
| Cow position: | chr12:32654515-32655235 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 495 |
| Conread position: | 1-690 |
| Cow position: | chr12:32677961-32677312 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 45 |
| Conread position: | 1-690 |
| Cow position: | chr12:35345532-35346215 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 1-690 |
| Cow position: | chr12:37559982-37560698 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 42 |
| Conread position: | 1-690 |
| Cow position: | chr12:42858561-42857849 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 44 |
| Conread position: | 2-413 |
| Cow position: | chr12:21387267-21386837 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 41 |
| Conread position: | 2-690 |
| Cow position: | chr12:20997113-20996402 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 101 |
| Conread position: | 2-690 |
| Cow position: | chr12:21209623-21210349 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 41 |
| Conread position: | 9-447 |
| Cow position: | chr12:14694998-14695447 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 312 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 115, 36 |
| Conread position: | 9-544 |
| Cow position: | chr12:25100091-25099530 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 38 |
| Conread position: | 9-690 |
| Cow position: | chr12:6405660-6404954 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 38 |
| Conread position: | 16-547 |
| Cow position: | chr12:600372-599834 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 32 |
| Conread position: | 19-231 |
| Cow position: | chr12:36428515-36428724 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 152, 24 |
| Conread position: | 19-690 |
| Cow position: | chr12:8677110-8676405 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 133 |
| Conread position: | 23-343 |
| Cow position: | chr12:21253617-21253285 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 88 |
| Conread position: | 31-690 |
| Cow position: | chr12:48471872-48471202 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 15 |
| Conread position: | 48-651 |
| Cow position: | chr12:11099241-11099863 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 339 |
| Conread position: | 49-482 |
| Cow position: | chr12:31202466-31202014 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 60-574 |
| Cow position: | chr12:33119183-33119732 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 389 |
| Conread position: | 60-690 |
| Cow position: | chr12:5144718-5145345 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 91 |
| Conread position: | 77-690 |
| Cow position: | chr12:1776919-1776281 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 88 |
| Conread position: | 79-396 |
| Cow position: | chr12:11580866-11581193 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 97, 30 |
| Conread position: | 81-324 |
| Cow position: | chr12:35313340-35313089 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 136, 79 |
| Conread position: | 128-690 |
| Cow position: | chr12:1888461-1887874 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 350 |
| Conread position: | 137-347 |
| Cow position: | chr12:15036667-15036448 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 137-605 |
| Cow position: | chr12:20843725-20844191 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 133 |
| Conread position: | 147-409 |
| Cow position: | chr12:42607148-42606870 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 32, 236 |
| Conread position: | 153-480 |
| Cow position: | chr12:349528-349875 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 65, 21 |
| Conread position: | 183-690 |
| Cow position: | chr12:21482283-21482786 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 23 |
| Conread position: | 237-497 |
| Cow position: | chr12:12293318-12293573 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 26 |
| Conread position: | 240-678 |
| Cow position: | chr12:21429221-21429681 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 241-690 |
| Cow position: | chr12:22204493-22204027 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 235 |
| Conread position: | 256-690 |
| Cow position: | chr12:24433848-24433400 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 212 |
| Conread position: | 270-632 |
| Cow position: | chr12:34174367-34174743 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 204 |
| Conread position: | 300-689 |
| Cow position: | chr12:23161621-23161227 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 262 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 127, 17 |
| Conread position: | 308-479 |
| Cow position: | chr12:20461775-20461948 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 70 |
Show alignments to all cow chromosomes.