Cow genome map
| Conread name: | Pig4-TMW8008H19 |
| Conread position: | 1-167 |
| Cow position: | chr13:47861581-47861746 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 144, 43 |
| Conread position: | 1-185 |
| Cow position: | chr13:52646120-52645938 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-225 |
| Cow position: | chr13:6758724-6758954 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-284 |
| Cow position: | chr13:42218157-42217866 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 1-336 |
| Cow position: | chr13:1592399-1592059 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 43 |
| Conread position: | 1-428 |
| Cow position: | chr13:43982343-43981921 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 46 |
| Conread position: | 1-451 |
| Cow position: | chr13:57024453-57024909 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 47 |
| Conread position: | 1-454 |
| Cow position: | chr13:47229249-47228770 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-493 |
| Cow position: | chr13:30654625-30654121 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 47 |
| Conread position: | 1-498 |
| Cow position: | chr13:15923624-15923109 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 46 |
| Conread position: | 1-541 |
| Cow position: | chr13:32546136-32546696 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 490 |
| Conread position: | 1-658 |
| Cow position: | chr13:4484549-4485222 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 74 |
| Conread position: | 1-671 |
| Cow position: | chr13:31555987-31555311 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 43 |
| Conread position: | 1-678 |
| Cow position: | chr13:2388059-2387352 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 488 |
| Conread position: | 1-690 |
| Cow position: | chr13:3653564-3652843 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 46 |
| Conread position: | 1-690 |
| Cow position: | chr13:4942140-4942850 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 45 |
| Conread position: | 1-690 |
| Cow position: | chr13:6667378-6666674 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 41 |
| Conread position: | 1-690 |
| Cow position: | chr13:9045524-9046213 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 47 |
| Conread position: | 1-690 |
| Cow position: | chr13:13325676-13326390 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 447 |
| Conread position: | 1-690 |
| Cow position: | chr13:17309228-17309928 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 1-690 |
| Cow position: | chr13:21697007-21697729 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 1-690 |
| Cow position: | chr13:21839443-21838742 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 42 |
| Conread position: | 1-690 |
| Cow position: | chr13:31611551-31610852 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 43 |
| Conread position: | 1-690 |
| Cow position: | chr13:31733134-31732431 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 1-690 |
| Cow position: | chr13:32984595-32983879 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 485 |
| Conread position: | 1-690 |
| Cow position: | chr13:34041581-34040869 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 46 |
| Conread position: | 1-690 |
| Cow position: | chr13:35758028-35758746 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 211 |
| Conread position: | 1-690 |
| Cow position: | chr13:43590087-43590779 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 46 |
| Conread position: | 2-190 |
| Cow position: | chr13:34424518-34424705 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 172, 41 |
| Conread position: | 2-577 |
| Cow position: | chr13:34049494-34050078 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 184 |
| Conread position: | 2-677 |
| Cow position: | chr13:14178082-14177403 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 43 |
| Conread position: | 2-690 |
| Cow position: | chr13:34324802-34324113 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 41 |
| Conread position: | 3-643 |
| Cow position: | chr13:25692440-25693092 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 43 |
| Conread position: | 3-690 |
| Cow position: | chr13:14402340-14401643 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 44 |
| Conread position: | 3-690 |
| Cow position: | chr13:34938222-34938902 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 42 |
| Conread position: | 7-655 |
| Cow position: | chr13:17051672-17051022 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 418 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 97, 31 |
| Conread position: | 8-371 |
| Cow position: | chr13:30304046-30304435 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 117 |
| Conread position: | 8-690 |
| Cow position: | chr13:15450368-15449682 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 110 |
| Conread position: | 9-422 |
| Cow position: | chr13:21602471-21602874 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 169, 37 |
| Conread position: | 9-505 |
| Cow position: | chr13:23002248-23001732 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 98 |
| Conread position: | 9-553 |
| Cow position: | chr13:5625240-5624661 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 321 |
| Conread position: | 9-657 |
| Cow position: | chr13:15543304-15543972 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 38 |
| Conread position: | 9-690 |
| Cow position: | chr13:11797953-11797242 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 28 |
| Conread position: | 9-690 |
| Cow position: | chr13:13900632-13901331 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 37 |
| Conread position: | 10-652 |
| Cow position: | chr13:49974441-49975092 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 33 |
| Conread position: | 11-491 |
| Cow position: | chr13:15519741-15519265 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 36 |
| Conread position: | 19-690 |
| Cow position: | chr13:31730121-31729438 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 28 |
| Conread position: | 20-547 |
| Cow position: | chr13:8797017-8796494 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 23 |
| Conread position: | 33-690 |
| Cow position: | chr13:678537-679213 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 10 |
| Conread position: | 40-595 |
| Cow position: | chr13:30239117-30239697 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 17 |
| Conread position: | 49-685 |
| Cow position: | chr13:11794241-11793618 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 60-690 |
| Cow position: | chr13:48358456-48359091 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 107 |
| Conread position: | 75-376 |
| Cow position: | chr13:29226330-29226026 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 49, 28 |
| Conread position: | 96-690 |
| Cow position: | chr13:34030469-34031062 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 102 |
| Conread position: | 117-460 |
| Cow position: | chr13:17998426-17998792 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 118-690 |
| Cow position: | chr13:61052151-61051587 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 10 |
| Conread position: | 119-627 |
| Cow position: | chr13:28860034-28860565 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 359 |
| Conread position: | 126-658 |
| Cow position: | chr13:50661180-50661707 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 24 |
| Conread position: | 162-690 |
| Cow position: | chr13:31507829-31508372 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 127 |
| Conread position: | 176-598 |
| Cow position: | chr13:26845215-26845615 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 318 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 42, 189 |
| Conread position: | 177-690 |
| Cow position: | chr13:34342835-34343371 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 96 |
| Conread position: | 183-615 |
| Cow position: | chr13:34909087-34908649 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 118 |
| Conread position: | 228-684 |
| Cow position: | chr13:60699578-60699131 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 107 |
| Conread position: | 228-690 |
| Cow position: | chr13:5501010-5500534 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 230 |
| Conread position: | 228-690 |
| Cow position: | chr13:6358112-6358589 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 242 |
| Conread position: | 237-631 |
| Cow position: | chr13:26777141-26777524 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 39, 47 |
| Conread position: | 253-490 |
| Cow position: | chr13:30011800-30011559 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 115 |
| Conread position: | 257-688 |
| Cow position: | chr13:42090670-42090230 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 50 |
| Conread position: | 264-690 |
| Cow position: | chr13:60648780-60648340 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 107 |
| Conread position: | 309-690 |
| Cow position: | chr13:47575160-47575557 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 92 |
| Conread position: | 336-690 |
| Cow position: | chr13:20541155-20540789 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 138 |
Show alignments to all cow chromosomes.