Cow genome map
| Conread name: | Pig4-TMW8008H19 |
| Conread position: | 1-182 |
| Cow position: | chr17:13705406-13705586 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 134, 43 |
| Conread position: | 1-221 |
| Cow position: | chr17:20488803-20489021 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 136, 43 |
| Conread position: | 1-231 |
| Cow position: | chr17:1880958-1881191 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 1-274 |
| Cow position: | chr17:1703832-1703555 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 184, 42 |
| Conread position: | 1-301 |
| Cow position: | chr17:2262966-2263274 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 57, 42 |
| Conread position: | 1-404 |
| Cow position: | chr17:6611628-6611205 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 1-415 |
| Cow position: | chr17:31767180-31766744 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 42 |
| Conread position: | 1-498 |
| Cow position: | chr17:6120573-6121086 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 295 |
| Conread position: | 1-555 |
| Cow position: | chr17:54597-54037 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 93 |
| Conread position: | 1-589 |
| Cow position: | chr17:2030989-2031581 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 42 |
| Conread position: | 1-619 |
| Cow position: | chr17:239208-239802 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 43 |
| Conread position: | 1-675 |
| Cow position: | chr17:20081009-20080335 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 42 |
| Conread position: | 1-676 |
| Cow position: | chr17:151037-150358 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 397 |
| Conread position: | 1-677 |
| Cow position: | chr17:20403279-20403976 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 371 |
| Conread position: | 1-678 |
| Cow position: | chr17:24783021-24783720 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 42 |
| Conread position: | 1-688 |
| Cow position: | chr17:6069415-6070111 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 1-690 |
| Cow position: | chr17:1656989-1656312 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 42 |
| Conread position: | 1-690 |
| Cow position: | chr17:2078139-2077420 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 42 |
| Conread position: | 1-690 |
| Cow position: | chr17:2247209-2246516 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 56 |
| Conread position: | 1-690 |
| Cow position: | chr17:3655434-3654719 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 1-690 |
| Cow position: | chr17:3707916-3707226 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 62 |
| Conread position: | 1-690 |
| Cow position: | chr17:4060957-4061672 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 42 |
| Conread position: | 1-690 |
| Cow position: | chr17:5227479-5228192 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 83 |
| Conread position: | 1-690 |
| Cow position: | chr17:6260718-6261429 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 265 |
| Conread position: | 1-690 |
| Cow position: | chr17:11086861-11086157 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 43 |
| Conread position: | 1-690 |
| Cow position: | chr17:11783699-11784437 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 42 |
| Conread position: | 1-690 |
| Cow position: | chr17:14040179-14039467 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 45 |
| Conread position: | 1-690 |
| Cow position: | chr17:14240359-14241075 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 46 |
| Conread position: | 1-690 |
| Cow position: | chr17:15142496-15141787 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 121 |
| Conread position: | 1-690 |
| Cow position: | chr17:15436653-15437354 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 1-690 |
| Cow position: | chr17:16121681-16121035 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 20 |
| Conread position: | 1-690 |
| Cow position: | chr17:19267968-19267275 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 46 |
| Conread position: | 1-690 |
| Cow position: | chr17:20099616-20098907 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 109 |
| Conread position: | 1-690 |
| Cow position: | chr17:23323592-23322878 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 1-690 |
| Cow position: | chr17:24029143-24028432 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 46 |
| Conread position: | 1-690 |
| Cow position: | chr17:34156980-34157692 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 1-690 |
| Cow position: | chr17:43989360-43990071 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 46 |
| Conread position: | 2-200 |
| Cow position: | chr17:13990488-13990294 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 79, 46 |
| Conread position: | 2-553 |
| Cow position: | chr17:13695268-13694753 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 23 |
| Conread position: | 2-583 |
| Cow position: | chr17:14216167-14215563 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 41 |
| Conread position: | 2-630 |
| Cow position: | chr17:2174673-2175289 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 41 |
| Conread position: | 2-690 |
| Cow position: | chr17:9080565-9079850 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 41 |
| Conread position: | 2-690 |
| Cow position: | chr17:21418442-21419124 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 44 |
| Conread position: | 3-314 |
| Cow position: | chr17:22133063-22133380 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 138 |
| Conread position: | 3-649 |
| Cow position: | chr17:2580480-2581151 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 380 |
| Conread position: | 4-690 |
| Cow position: | chr17:8202829-8203500 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 42 |
| Conread position: | 9-369 |
| Cow position: | chr17:15324698-15325078 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 37 |
| Conread position: | 9-543 |
| Cow position: | chr17:19020439-19020981 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 269 |
| Conread position: | 9-690 |
| Cow position: | chr17:6000592-5999926 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 106 |
| Conread position: | 9-690 |
| Cow position: | chr17:15372094-15372782 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 64 |
| Conread position: | 9-690 |
| Cow position: | chr17:15851558-15852263 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 16 |
| Conread position: | 9-690 |
| Cow position: | chr17:40805678-40806377 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 35 |
| Conread position: | 10-482 |
| Cow position: | chr17:20390218-20389726 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 33 |
| Conread position: | 11-690 |
| Cow position: | chr17:20086887-20086206 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 121 |
| Conread position: | 12-382 |
| Cow position: | chr17:16856649-16856258 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 36 |
| Conread position: | 23-676 |
| Cow position: | chr17:4082899-4083574 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 23 |
| Conread position: | 28-587 |
| Cow position: | chr17:22558857-22559423 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 20 |
| Conread position: | 40-686 |
| Cow position: | chr17:2149329-2149960 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 88 |
| Conread position: | 48-544 |
| Cow position: | chr17:4941812-4941303 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 81 |
| Conread position: | 57-231 |
| Cow position: | chr17:14895089-14895262 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 160, 80 |
| Conread position: | 60-690 |
| Cow position: | chr17:1787023-1786396 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 78 |
| Conread position: | 65-652 |
| Cow position: | chr17:33381645-33381053 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 393 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 104, 114 |
| Conread position: | 66-678 |
| Cow position: | chr17:251076-251702 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 10 |
| Conread position: | 81-440 |
| Cow position: | chr17:42266362-42266719 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 271 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 85-690 |
| Cow position: | chr17:182517-183141 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 202 |
| Conread position: | 110-585 |
| Cow position: | chr17:33284867-33284389 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 237 |
| Conread position: | 111-584 |
| Cow position: | chr17:13675322-13674828 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 263 |
| Conread position: | 125-690 |
| Cow position: | chr17:27793797-27793213 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 326 |
| Conread position: | 137-310 |
| Cow position: | chr17:12669430-12669247 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 39, 54 |
| Conread position: | 147-690 |
| Cow position: | chr17:39049217-39049785 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 337 |
| Conread position: | 148-666 |
| Cow position: | chr17:4675121-4675649 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 155 |
| Conread position: | 159-534 |
| Cow position: | chr17:21769993-21769592 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 326 |
| Conread position: | 177-659 |
| Cow position: | chr17:13705824-13706301 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 86 |
| Conread position: | 180-678 |
| Cow position: | chr17:23038618-23039121 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 220-690 |
| Cow position: | chr17:14936887-14936401 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 259 |
| Conread position: | 270-690 |
| Cow position: | chr17:28027364-28026934 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 156 |
| Conread position: | 287-677 |
| Cow position: | chr17:42814579-42814960 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 75, 168 |
| Conread position: | 301-685 |
| Cow position: | chr17:1704040-1704436 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 174 |
| Conread position: | 301-689 |
| Cow position: | chr17:733174-732774 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 143 |
| Conread position: | 302-595 |
| Cow position: | chr17:10841934-10842230 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 11, 56 |
| Conread position: | 308-690 |
| Cow position: | chr17:22133426-22133836 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 95 |
Show alignments to all cow chromosomes.