Cow genome map
| Conread name: | Pig4-TMW8008H19 |
| Conread position: | 1-172 |
| Cow position: | chr18:32653287-32653457 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-422 |
| Cow position: | chr18:51661411-51661850 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 42 |
| Conread position: | 1-453 |
| Cow position: | chr18:16869490-16869928 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 213, 37 |
| Conread position: | 1-498 |
| Cow position: | chr18:16079737-16080258 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 485 |
| Conread position: | 1-505 |
| Cow position: | chr18:40479458-40479985 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 440 |
| Conread position: | 1-529 |
| Cow position: | chr18:11274037-11273498 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 67 |
| Conread position: | 1-582 |
| Cow position: | chr18:19405500-19404918 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 42 |
| Conread position: | 1-589 |
| Cow position: | chr18:27837240-27836628 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 46 |
| Conread position: | 1-636 |
| Cow position: | chr18:38343205-38342580 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 44 |
| Conread position: | 1-652 |
| Cow position: | chr18:41839732-41839076 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 20 |
| Conread position: | 1-690 |
| Cow position: | chr18:14131463-14132168 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 46 |
| Conread position: | 1-690 |
| Cow position: | chr18:19353429-19354145 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 1-690 |
| Cow position: | chr18:23798719-23799423 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 46 |
| Conread position: | 1-690 |
| Cow position: | chr18:29237974-29238665 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 42 |
| Conread position: | 1-690 |
| Cow position: | chr18:47742572-47743270 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 42 |
| Conread position: | 1-690 |
| Cow position: | chr18:51342755-51343461 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 1-690 |
| Cow position: | chr18:51461983-51461272 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 1-690 |
| Cow position: | chr18:51481954-51482632 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 44 |
| Conread position: | 1-690 |
| Cow position: | chr18:54005102-54004402 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 42 |
| Conread position: | 1-690 |
| Cow position: | chr18:54170466-54169745 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 176 |
| Conread position: | 2-563 |
| Cow position: | chr18:52651983-52652563 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 43 |
| Conread position: | 2-589 |
| Cow position: | chr18:36177970-36177392 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 376 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 141, 41 |
| Conread position: | 2-619 |
| Cow position: | chr18:54023063-54022425 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 398 |
| Conread position: | 2-652 |
| Cow position: | chr18:46867825-46867172 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 41 |
| Conread position: | 3-575 |
| Cow position: | chr18:54271567-54272148 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 13 |
| Conread position: | 4-676 |
| Cow position: | chr18:16393029-16392349 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 39 |
| Conread position: | 7-690 |
| Cow position: | chr18:16089212-16089898 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 40 |
| Conread position: | 9-690 |
| Cow position: | chr18:14417063-14417745 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 36 |
| Conread position: | 9-690 |
| Cow position: | chr18:16175538-16174842 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 38 |
| Conread position: | 9-690 |
| Cow position: | chr18:27988269-27988964 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 187 |
| Conread position: | 9-690 |
| Cow position: | chr18:28972806-28972108 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 38 |
| Conread position: | 9-690 |
| Cow position: | chr18:37507039-37507741 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 36 |
| Conread position: | 13-657 |
| Cow position: | chr18:56013657-56014320 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 20 |
| Conread position: | 22-689 |
| Cow position: | chr18:25352347-25353036 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 25 |
| Conread position: | 50-690 |
| Cow position: | chr18:33270065-33270676 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 114 |
| Conread position: | 57-690 |
| Cow position: | chr18:29865485-29864832 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 18 |
| Conread position: | 63-343 |
| Cow position: | chr18:15821700-15821413 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 76, 65 |
| Conread position: | 70-460 |
| Cow position: | chr18:51625163-51624761 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 123, 30 |
| Conread position: | 80-425 |
| Cow position: | chr18:51614501-51614140 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 98, 20 |
| Conread position: | 124-381 |
| Cow position: | chr18:36255734-36255472 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 53, 234 |
| Conread position: | 181-506 |
| Cow position: | chr18:46876083-46875759 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 162 |
| Conread position: | 223-690 |
| Cow position: | chr18:51695000-51695480 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 5 |
| Conread position: | 236-525 |
| Cow position: | chr18:5079169-5078877 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 109, 52 |
| Conread position: | 236-690 |
| Cow position: | chr18:36509926-36510395 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 238 |
| Conread position: | 238-462 |
| Cow position: | chr18:25921293-25921528 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 240-690 |
| Cow position: | chr18:26245304-26244844 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 11 |
| Conread position: | 264-690 |
| Cow position: | chr18:4947314-4947725 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 39 |
| Conread position: | 265-690 |
| Cow position: | chr18:35054481-35054902 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 107 |
| Conread position: | 266-547 |
| Cow position: | chr18:17672462-17672170 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 266-690 |
| Cow position: | chr18:33752061-33752474 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 21 |
Show alignments to all cow chromosomes.