Cow genome map

Conread name: Pig4-TMW8008H19

Conread position: 1-216
Cow position: chr20:2788115-2787904 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 176, 56

Conread position: 1-231
Cow position: chr20:12437676-12437450 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 43

Conread position: 1-301
Cow position: chr20:8973784-8973479 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 42

Conread position: 1-369
Cow position: chr20:35125527-35125913 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 46

Conread position: 1-398
Cow position: chr20:8216547-8216950 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 43

Conread position: 1-409
Cow position: chr20:32349301-32349724 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 284
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 42, 17

Conread position: 1-424
Cow position: chr20:13679019-13678570 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 1-434
Cow position: chr20:14869922-14869479 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 44

Conread position: 1-586
Cow position: chr20:19355801-19356398 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 45

Conread position: 1-589
Cow position: chr20:18323888-18323323 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 42

Conread position: 1-649
Cow position: chr20:12569554-12570211 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 47

Conread position: 1-676
Cow position: chr20:9344001-9344680 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 71

Conread position: 1-685
Cow position: chr20:21394961-21395650 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 42

Conread position: 1-688
Cow position: chr20:30686603-30687327 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 149

Conread position: 1-690
Cow position: chr20:823792-824511 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 445

Conread position: 1-690
Cow position: chr20:10854307-10853606 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 42

Conread position: 1-690
Cow position: chr20:15293036-15293724 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 28

Conread position: 1-690
Cow position: chr20:16178733-16178004 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 20

Conread position: 1-690
Cow position: chr20:23799917-23800627 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 46

Conread position: 1-690
Cow position: chr20:24615835-24615165 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 109

Conread position: 1-690
Cow position: chr20:27870237-27870952 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 46

Conread position: 1-690
Cow position: chr20:28161853-28162569 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 171

Conread position: 1-690
Cow position: chr20:29949537-29950269 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 218

Conread position: 2-547
Cow position: chr20:27338243-27338797 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 46

Conread position: 2-564
Cow position: chr20:18314315-18313754 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 46

Conread position: 2-676
Cow position: chr20:15066514-15067182 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 40

Conread position: 2-690
Cow position: chr20:19438950-19439660 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 41

Conread position: 3-429
Cow position: chr20:13664010-13663568 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 103

Conread position: 8-690
Cow position: chr20:21915653-21916381 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 157

Conread position: 9-690
Cow position: chr20:5535976-5536688 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 12

Conread position: 9-690
Cow position: chr20:13763946-13764639 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 38

Conread position: 9-690
Cow position: chr20:15096839-15096151 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 35

Conread position: 9-690
Cow position: chr20:28564549-28563836 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 109

Conread position: 12-690
Cow position: chr20:23468618-23467924 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 35

Conread position: 14-690
Cow position: chr20:20753723-20753075 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 30

Conread position: 19-690
Cow position: chr20:25849770-25849086 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 28

Conread position: 35-581
Cow position: chr20:9521068-9520517 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 132

Conread position: 47-690
Cow position: chr20:871911-871281 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 64

Conread position: 48-456
Cow position: chr20:22210130-22210543 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 52

Conread position: 94-690
Cow position: chr20:17660621-17660001 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 387

Conread position: 94-690
Cow position: chr20:30429395-30430016 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 66

Conread position: 119-317
Cow position: chr20:40259449-40259661 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 143-690
Cow position: chr20:9546845-9547390 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 17

Conread position: 181-513
Cow position: chr20:19340852-19341198 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 195

Conread position: 220-690
Cow position: chr20:32120595-32121069 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 56

Conread position: 228-643
Cow position: chr20:27896759-27896349 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 71

Conread position: 236-690
Cow position: chr20:12437145-12436676 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 494-690
Cow position: chr20:10101469-10101277 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 67, 40

Show alignments to all cow chromosomes.