Cow genome map

Conread name: Pig4-TMW8008H19

Conread position: 1-126
Cow position: chr22:31314322-31314444 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 1-169
Cow position: chr22:44458029-44458198 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 79

Conread position: 1-186
Cow position: chr22:44350687-44350503 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 170, 74

Conread position: 1-231
Cow position: chr22:11032722-11032954 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 170, 59

Conread position: 1-258
Cow position: chr22:37133627-37133894 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 90

Conread position: 1-277
Cow position: chr22:44477600-44477882 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 44

Conread position: 1-336
Cow position: chr22:19319989-19320336 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 178, 42

Conread position: 1-343
Cow position: chr22:3273186-3272844 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 43

Conread position: 1-359
Cow position: chr22:40370426-40370786 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 79

Conread position: 1-480
Cow position: chr22:19536529-19537025 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 42

Conread position: 1-596
Cow position: chr22:18028257-18028879 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 117

Conread position: 1-599
Cow position: chr22:18815405-18814771 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 500

Conread position: 1-619
Cow position: chr22:36184734-36185367 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 115

Conread position: 1-658
Cow position: chr22:35906414-35905733 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 101

Conread position: 1-672
Cow position: chr22:12730708-12730027 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 37

Conread position: 1-681
Cow position: chr22:6021638-6022328 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 42

Conread position: 1-682
Cow position: chr22:10908861-10908159 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 41

Conread position: 1-686
Cow position: chr22:1281756-1281054 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 215

Conread position: 1-690
Cow position: chr22:522419-521707 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 40

Conread position: 1-690
Cow position: chr22:538076-538793 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 111

Conread position: 1-690
Cow position: chr22:559734-559023 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 471

Conread position: 1-690
Cow position: chr22:694598-695297 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 33

Conread position: 1-690
Cow position: chr22:1520048-1519349 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 149

Conread position: 1-690
Cow position: chr22:1879769-1880489 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 407

Conread position: 1-690
Cow position: chr22:3277384-3276672 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 42

Conread position: 1-690
Cow position: chr22:6332685-6333393 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 46

Conread position: 1-690
Cow position: chr22:8737354-8736665 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 42

Conread position: 1-690
Cow position: chr22:11804079-11803368 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 42

Conread position: 1-690
Cow position: chr22:16201903-16202597 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 42

Conread position: 1-690
Cow position: chr22:17327480-17326773 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 45

Conread position: 1-690
Cow position: chr22:20239866-20239154 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 42

Conread position: 1-690
Cow position: chr22:27308800-27308093 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 42

Conread position: 1-690
Cow position: chr22:30677708-30677029 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 46

Conread position: 1-690
Cow position: chr22:31334060-31333364 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 42

Conread position: 1-690
Cow position: chr22:34169314-34170020 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 46

Conread position: 1-690
Cow position: chr22:37268136-37268851 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 47

Conread position: 1-690
Cow position: chr22:37292690-37291993 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 47

Conread position: 1-690
Cow position: chr22:39468545-39467833 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 213

Conread position: 1-690
Cow position: chr22:42992151-42992854 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 44

Conread position: 1-690
Cow position: chr22:44397421-44398114 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 56

Conread position: 1-690
Cow position: chr22:44934945-44935647 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 43

Conread position: 1-690
Cow position: chr22:46580746-46580033 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 482

Conread position: 2-505
Cow position: chr22:8121107-8120588 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 376

Conread position: 2-552
Cow position: chr22:316480-317051 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 86

Conread position: 2-690
Cow position: chr22:13773506-13774201 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 37

Conread position: 7-690
Cow position: chr22:19142711-19142003 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 168

Conread position: 9-230
Cow position: chr22:15312968-15312746 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 169, 151

Conread position: 9-690
Cow position: chr22:36860552-36859864 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 36

Conread position: 10-675
Cow position: chr22:1268773-1268083 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 25

Conread position: 11-631
Cow position: chr22:45510553-45509926 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 32

Conread position: 15-553
Cow position: chr22:6502151-6501597 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 166

Conread position: 19-435
Cow position: chr22:34600343-34600769 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 96

Conread position: 20-649
Cow position: chr22:45581920-45582553 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 28

Conread position: 23-690
Cow position: chr22:326180-325492 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 24-690
Cow position: chr22:35670649-35669986 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 5

Conread position: 34-690
Cow position: chr22:44492059-44492733 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 444

Conread position: 49-686
Cow position: chr22:3305556-3304923 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 135

Conread position: 50-415
Cow position: chr22:6602214-6601838 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 223

Conread position: 55-688
Cow position: chr22:21195465-21194815 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 24

Conread position: 57-216
Cow position: chr22:46612892-46613052 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 114, 0

Conread position: 60-586
Cow position: chr22:284041-283532 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 193

Conread position: 60-688
Cow position: chr22:21035356-21034707 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 67

Conread position: 103-663
Cow position: chr22:33351755-33352319 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 154

Conread position: 116-498
Cow position: chr22:7304567-7304165 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 366

Conread position: 143-484
Cow position: chr22:38550507-38550862 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 159

Conread position: 149-629
Cow position: chr22:24951676-24952181 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 335

Conread position: 153-585
Cow position: chr22:16206883-16206437 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 305
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 30, 107

Conread position: 174-690
Cow position: chr22:44368325-44367797 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 85

Conread position: 177-690
Cow position: chr22:44348705-44348183 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 284

Conread position: 177-690
Cow position: chr22:46585415-46584884 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 299

Conread position: 227-678
Cow position: chr22:41241438-41241902 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 58

Conread position: 228-690
Cow position: chr22:46614513-46614985 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 42

Conread position: 230-672
Cow position: chr22:15352092-15352537 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 136

Conread position: 232-525
Cow position: chr22:11033327-11033608 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 63, 35

Conread position: 244-686
Cow position: chr22:44518398-44517961 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 28

Conread position: 264-690
Cow position: chr22:30128836-30129264 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 17

Conread position: 264-690
Cow position: chr22:30146485-30146913 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 17

Conread position: 266-690
Cow position: chr22:1323412-1323835 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 80

Conread position: 272-554
Cow position: chr22:44458201-44458496 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 195

Conread position: 272-690
Cow position: chr22:296707-297134 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 87

Conread position: 272-690
Cow position: chr22:29012010-29011591 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 41

Conread position: 277-690
Cow position: chr22:21590677-21591107 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 194

Conread position: 283-487
Cow position: chr22:37141426-37141633 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 81

Conread position: 299-690
Cow position: chr22:13766651-13767043 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 8

Conread position: 430-690
Cow position: chr22:2718482-2718219 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 172
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 446-690
Cow position: chr22:34601032-34601272 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 188
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 55, 16

Conread position: 526-690
Cow position: chr22:15955507-15955343 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 533-690
Cow position: chr22:40371573-40371725 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 16, 0

Show alignments to all cow chromosomes.