Cow genome map
| Conread name: | Pig4-TMW8008H19 |
| Conread position: | 1-187 |
| Cow position: | chr23:1401559-1401380 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-192 |
| Cow position: | chr23:16614461-16614273 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 54, 82 |
| Conread position: | 1-195 |
| Cow position: | chr23:2717359-2717552 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 55, 151 |
| Conread position: | 1-304 |
| Cow position: | chr23:38669894-38669579 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 73, 181 |
| Conread position: | 1-307 |
| Cow position: | chr23:2780991-2780675 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 138, 37 |
| Conread position: | 1-369 |
| Cow position: | chr23:1956871-1957236 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 43 |
| Conread position: | 1-370 |
| Cow position: | chr23:26159752-26159357 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 17, 366 |
| Conread position: | 1-418 |
| Cow position: | chr23:5739383-5738953 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 43 |
| Conread position: | 1-437 |
| Cow position: | chr23:14964071-14963624 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 46 |
| Conread position: | 1-488 |
| Cow position: | chr23:25534293-25534765 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 325 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 144, 42 |
| Conread position: | 1-491 |
| Cow position: | chr23:25682966-25682509 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 42 |
| Conread position: | 1-576 |
| Cow position: | chr23:27400483-27401093 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 158 |
| Conread position: | 1-577 |
| Cow position: | chr23:19949624-19949019 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 488 |
| Conread position: | 1-599 |
| Cow position: | chr23:21243770-21243147 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 294 |
| Conread position: | 1-618 |
| Cow position: | chr23:4360998-4361599 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 42 |
| Conread position: | 1-677 |
| Cow position: | chr23:618490-617829 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 44 |
| Conread position: | 1-677 |
| Cow position: | chr23:13512086-13512742 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 42 |
| Conread position: | 1-678 |
| Cow position: | chr23:16498263-16497584 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 42 |
| Conread position: | 1-690 |
| Cow position: | chr23:965520-964814 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 59 |
| Conread position: | 1-690 |
| Cow position: | chr23:2026106-2025402 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 43 |
| Conread position: | 1-690 |
| Cow position: | chr23:2758863-2759579 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 47 |
| Conread position: | 1-690 |
| Cow position: | chr23:3880109-3879405 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 28 |
| Conread position: | 1-690 |
| Cow position: | chr23:4639649-4638917 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 15 |
| Conread position: | 1-690 |
| Cow position: | chr23:5873604-5872891 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 47 |
| Conread position: | 1-690 |
| Cow position: | chr23:19490511-19491232 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 447 |
| Conread position: | 1-690 |
| Cow position: | chr23:29451369-29450647 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 42 |
| Conread position: | 1-690 |
| Cow position: | chr23:31649067-31648351 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 47 |
| Conread position: | 1-690 |
| Cow position: | chr23:36030402-36029702 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 59 |
| Conread position: | 2-231 |
| Cow position: | chr23:27971506-27971734 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 41 |
| Conread position: | 2-231 |
| Cow position: | chr23:28367556-28367323 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 43, 76 |
| Conread position: | 2-274 |
| Cow position: | chr23:28078615-28078892 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 126 |
| Conread position: | 2-437 |
| Cow position: | chr23:38581704-38582118 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 313 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 83, 25 |
| Conread position: | 2-572 |
| Cow position: | chr23:2576401-2576950 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 173 |
| Conread position: | 2-606 |
| Cow position: | chr23:2342054-2342675 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 39 |
| Conread position: | 2-690 |
| Cow position: | chr23:15876591-15875889 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 41 |
| Conread position: | 2-690 |
| Cow position: | chr23:22167646-22168321 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 73 |
| Conread position: | 3-690 |
| Cow position: | chr23:1012816-1012140 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 97 |
| Conread position: | 3-690 |
| Cow position: | chr23:2794279-2793591 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 44 |
| Conread position: | 4-200 |
| Cow position: | chr23:8287006-8287204 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 4-216 |
| Cow position: | chr23:7369502-7369711 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 173, 38 |
| Conread position: | 9-689 |
| Cow position: | chr23:15178056-15178743 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 67 |
| Conread position: | 9-690 |
| Cow position: | chr23:4818003-4818703 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 39 |
| Conread position: | 9-690 |
| Cow position: | chr23:4889668-4890363 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 38 |
| Conread position: | 9-690 |
| Cow position: | chr23:11779767-11780460 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 38 |
| Conread position: | 9-690 |
| Cow position: | chr23:15526552-15527258 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 38 |
| Conread position: | 11-540 |
| Cow position: | chr23:3707107-3707652 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 32 |
| Conread position: | 12-293 |
| Cow position: | chr23:22943163-22942877 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 127, 67 |
| Conread position: | 13-422 |
| Cow position: | chr23:14923313-14922884 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 30 |
| Conread position: | 25-619 |
| Cow position: | chr23:1022964-1022352 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 161 |
| Conread position: | 32-690 |
| Cow position: | chr23:22146306-22145625 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 11 |
| Conread position: | 45-690 |
| Cow position: | chr23:20155195-20154545 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 102 |
| Conread position: | 48-690 |
| Cow position: | chr23:14972957-14972274 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 241 |
| Conread position: | 53-452 |
| Cow position: | chr23:13510661-13511058 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 83 |
| Conread position: | 60-688 |
| Cow position: | chr23:28218449-28219104 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 432 |
| Conread position: | 68-421 |
| Cow position: | chr23:15041715-15041367 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 14, 61 |
| Conread position: | 95-292 |
| Cow position: | chr23:17879055-17878843 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 104-538 |
| Cow position: | chr23:23282304-23282737 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 22 |
| Conread position: | 131-415 |
| Cow position: | chr23:19451249-19451550 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 52, 278 |
| Conread position: | 132-599 |
| Cow position: | chr23:2718418-2718903 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 38 |
| Conread position: | 160-424 |
| Cow position: | chr23:16700410-16700680 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 160-680 |
| Cow position: | chr23:16054910-16055444 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 104 |
| Conread position: | 171-690 |
| Cow position: | chr23:21822136-21821638 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 31 |
| Conread position: | 178-652 |
| Cow position: | chr23:16614025-16613545 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 6 |
| Conread position: | 220-652 |
| Cow position: | chr23:38691689-38692134 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 252 |
| Conread position: | 220-690 |
| Cow position: | chr23:11714670-11714185 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 226-690 |
| Cow position: | chr23:7314112-7314591 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 248 |
| Conread position: | 234-599 |
| Cow position: | chr23:38578934-38579286 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 35, 54 |
| Conread position: | 237-690 |
| Cow position: | chr23:2440038-2439608 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 18 |
| Conread position: | 240-690 |
| Cow position: | chr23:4513697-4514164 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 231 |
| Conread position: | 245-690 |
| Cow position: | chr23:8287182-8287619 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 122 |
| Conread position: | 272-690 |
| Cow position: | chr23:23172028-23172457 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 200 |
| Conread position: | 276-689 |
| Cow position: | chr23:15218618-15218208 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 70 |
Show alignments to all cow chromosomes.