Cow genome map
| Conread name: | Pig4-TMW8008H19 |
| Conread position: | 1-231 |
| Cow position: | chr24:12129007-12128773 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 53, 130 |
| Conread position: | 1-296 |
| Cow position: | chr24:17695921-17695617 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 46 |
| Conread position: | 1-304 |
| Cow position: | chr24:6024046-6023734 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 170, 42 |
| Conread position: | 1-305 |
| Cow position: | chr24:12109644-12109340 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 170, 74 |
| Conread position: | 1-343 |
| Cow position: | chr24:6668746-6668411 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 40 |
| Conread position: | 1-343 |
| Cow position: | chr24:14754733-14755092 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 66, 235 |
| Conread position: | 1-350 |
| Cow position: | chr24:6085122-6085475 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 41 |
| Conread position: | 1-489 |
| Cow position: | chr24:29305255-29304746 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 68 |
| Conread position: | 1-531 |
| Cow position: | chr24:35841008-35840474 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 75 |
| Conread position: | 1-551 |
| Cow position: | chr24:9187671-9187110 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 42 |
| Conread position: | 1-587 |
| Cow position: | chr24:14389479-14388877 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 42 |
| Conread position: | 1-589 |
| Cow position: | chr24:12699746-12699154 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 42 |
| Conread position: | 1-606 |
| Cow position: | chr24:6142148-6142756 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 56 |
| Conread position: | 1-625 |
| Cow position: | chr24:6435542-6436189 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 42 |
| Conread position: | 1-658 |
| Cow position: | chr24:6407091-6407771 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 151 |
| Conread position: | 1-666 |
| Cow position: | chr24:17321765-17322437 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 362 |
| Conread position: | 1-689 |
| Cow position: | chr24:4414471-4413785 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 47 |
| Conread position: | 1-689 |
| Cow position: | chr24:12334697-12333970 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 46 |
| Conread position: | 1-690 |
| Cow position: | chr24:5992166-5991455 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 42 |
| Conread position: | 1-690 |
| Cow position: | chr24:9091003-9090291 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 37 |
| Conread position: | 1-690 |
| Cow position: | chr24:9545123-9545825 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 47 |
| Conread position: | 1-690 |
| Cow position: | chr24:12087265-12087970 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 366 |
| Conread position: | 1-690 |
| Cow position: | chr24:12150251-12149519 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 46 |
| Conread position: | 1-690 |
| Cow position: | chr24:13189242-13189934 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 168 |
| Conread position: | 1-690 |
| Cow position: | chr24:13233313-13234019 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 492 |
| Conread position: | 1-690 |
| Cow position: | chr24:19702544-19703257 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 189 |
| Conread position: | 1-690 |
| Cow position: | chr24:23504803-23504089 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 42 |
| Conread position: | 1-690 |
| Cow position: | chr24:44018579-44019279 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 2-650 |
| Cow position: | chr24:16097613-16098247 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 33 |
| Conread position: | 2-677 |
| Cow position: | chr24:6353219-6353892 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 44 |
| Conread position: | 2-690 |
| Cow position: | chr24:6659436-6658724 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 41 |
| Conread position: | 2-690 |
| Cow position: | chr24:8151214-8150551 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 11 |
| Conread position: | 2-690 |
| Cow position: | chr24:12238354-12239061 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 55 |
| Conread position: | 3-263 |
| Cow position: | chr24:6332631-6332374 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 123, 158 |
| Conread position: | 3-673 |
| Cow position: | chr24:17370905-17370270 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 45 |
| Conread position: | 4-690 |
| Cow position: | chr24:147547-146841 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 42 |
| Conread position: | 5-336 |
| Cow position: | chr24:30430678-30431020 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 174, 38 |
| Conread position: | 7-690 |
| Cow position: | chr24:19834462-19835177 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 40 |
| Conread position: | 9-434 |
| Cow position: | chr24:39355072-39355517 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 48 |
| Conread position: | 9-453 |
| Cow position: | chr24:1450495-1450937 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 114 |
| Conread position: | 9-689 |
| Cow position: | chr24:29188360-29189056 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 38 |
| Conread position: | 9-690 |
| Cow position: | chr24:12205239-12204572 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 128 |
| Conread position: | 9-690 |
| Cow position: | chr24:22972160-22972835 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 38 |
| Conread position: | 9-690 |
| Cow position: | chr24:35869486-35868815 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 35 |
| Conread position: | 11-673 |
| Cow position: | chr24:38638610-38639272 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 34 |
| Conread position: | 11-686 |
| Cow position: | chr24:6337461-6338148 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 34 |
| Conread position: | 13-412 |
| Cow position: | chr24:36558699-36558289 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 33 |
| Conread position: | 18-690 |
| Cow position: | chr24:14383561-14382860 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 19 |
| Conread position: | 19-690 |
| Cow position: | chr24:6129903-6130581 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 28 |
| Conread position: | 23-690 |
| Cow position: | chr24:7089892-7089229 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 74 |
| Conread position: | 33-329 |
| Cow position: | chr24:16083940-16083627 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 44-690 |
| Cow position: | chr24:7062643-7063311 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 31 |
| Conread position: | 50-690 |
| Cow position: | chr24:13179910-13179251 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 137 |
| Conread position: | 58-543 |
| Cow position: | chr24:12163056-12163558 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 216 |
| Conread position: | 79-656 |
| Cow position: | chr24:19640818-19641452 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 90 |
| Conread position: | 94-607 |
| Cow position: | chr24:11152087-11151549 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 350 |
| Conread position: | 124-415 |
| Cow position: | chr24:6060378-6060685 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 93, 176 |
| Conread position: | 138-690 |
| Cow position: | chr24:17300706-17300142 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 147-456 |
| Cow position: | chr24:36709783-36710103 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 27, 144 |
| Conread position: | 148-677 |
| Cow position: | chr24:40101689-40101158 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 251 |
| Conread position: | 153-690 |
| Cow position: | chr24:16561116-16560540 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 423 |
| Conread position: | 154-435 |
| Cow position: | chr24:33028091-33028372 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 29 |
| Conread position: | 155-690 |
| Cow position: | chr24:38585908-38585364 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 324 |
| Conread position: | 198-589 |
| Cow position: | chr24:14305098-14305475 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 66 |
| Conread position: | 223-543 |
| Cow position: | chr24:25437585-25437902 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 5 |
| Conread position: | 229-460 |
| Cow position: | chr24:10222874-10222636 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 66, 111 |
| Conread position: | 236-686 |
| Cow position: | chr24:6324049-6323584 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 212 |
| Conread position: | 236-690 |
| Cow position: | chr24:12127811-12127340 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 133 |
| Conread position: | 238-686 |
| Cow position: | chr24:36298740-36299173 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 101 |
| Conread position: | 263-690 |
| Cow position: | chr24:8606146-8606591 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 98 |
| Conread position: | 287-690 |
| Cow position: | chr24:6023730-6023318 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 182 |
| Conread position: | 309-534 |
| Cow position: | chr24:40468431-40468662 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 29, 157 |
| Conread position: | 557-690 |
| Cow position: | chr24:39678948-39679081 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.