Cow genome map


           Conread name:
           Pig4-TMW8008H19
        

               Conread position:
               1-231
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               53, 130
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 46
               

               Conread position:
               1-304
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               221
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               170, 42
               

               Conread position:
               1-305
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               214
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               170, 74
               

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 40
               

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               66, 235
               

               Conread position:
               1-350
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 41
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 68
               

               Conread position:
               1-531
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 75
               

               Conread position:
               1-551
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 42
               

               Conread position:
               1-587
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 42
               

               Conread position:
               1-589
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 42
               

               Conread position:
               1-606
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 56
               

               Conread position:
               1-625
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 42
               

               Conread position:
               1-658
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 151
               

               Conread position:
               1-666
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 362
               

               Conread position:
               1-689
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 47
               

               Conread position:
               1-689
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 46
               

               Conread position:
               1-690
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 42
               

               Conread position:
               1-690
               

               Cow position:
               
               

               Alignm length:
               727
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 37
               

               Conread position:
               1-690
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 47
               

               Conread position:
               1-690
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 366
               

               Conread position:
               1-690
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 46
               

               Conread position:
               1-690
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 168
               

               Conread position:
               1-690
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 492
               

               Conread position:
               1-690
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 189
               

               Conread position:
               1-690
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 42
               

               Conread position:
               1-690
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 42
               

               Conread position:
               2-650
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 33
               

               Conread position:
               2-677
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 44
               

               Conread position:
               2-690
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 41
               

               Conread position:
               2-690
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 11
               

               Conread position:
               2-690
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 55
               

               Conread position:
               3-263
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               123, 158
               

               Conread position:
               3-673
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 45
               

               Conread position:
               4-690
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 42
               

               Conread position:
               5-336
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               239
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               174, 38
               

               Conread position:
               7-690
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 40
               

               Conread position:
               9-434
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               76, 48
               

               Conread position:
               9-453
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 114
               

               Conread position:
               9-689
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 38
               

               Conread position:
               9-690
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               328, 128
               

               Conread position:
               9-690
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 38
               

               Conread position:
               9-690
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 35
               

               Conread position:
               11-673
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 34
               

               Conread position:
               11-686
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 34
               

               Conread position:
               13-412
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 33
               

               Conread position:
               18-690
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 19
               

               Conread position:
               19-690
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 28
               

               Conread position:
               23-690
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 74
               

               Conread position:
               33-329
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               44-690
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 31
               

               Conread position:
               50-690
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 137
               

               Conread position:
               58-543
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 216
               

               Conread position:
               79-656
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 90
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 350
               

               Conread position:
               124-415
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               93, 176
               

               Conread position:
               138-690
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 9
               

               Conread position:
               147-456
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               27, 144
               

               Conread position:
               148-677
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 251
               

               Conread position:
               153-690
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 423
               

               Conread position:
               154-435
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 29
               

               Conread position:
               155-690
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 324
               

               Conread position:
               198-589
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 66
               

               Conread position:
               223-543
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 5
               

               Conread position:
               229-460
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               66, 111
               

               Conread position:
               236-686
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 212
               

               Conread position:
               236-690
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 133
               

               Conread position:
               238-686
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 101
               

               Conread position:
               263-690
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 98
               

               Conread position:
               287-690
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 182
               

               Conread position:
               309-534
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               29, 157
               

               Conread position:
               557-690
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.