Cow genome map
| Conread name: | Pig4-TMW8008H19 |
| Conread position: | 1-186 |
| Cow position: | chr28:1217134-1216947 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 177 |
| Conread position: | 1-187 |
| Cow position: | chr28:5113274-5113090 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 142, 43 |
| Conread position: | 1-214 |
| Cow position: | chr28:2988061-2987853 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-322 |
| Cow position: | chr28:24883953-24883630 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 173, 112 |
| Conread position: | 1-628 |
| Cow position: | chr28:22042253-22041617 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 42 |
| Conread position: | 1-630 |
| Cow position: | chr28:9179648-9180279 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 1-645 |
| Cow position: | chr28:17666284-17665627 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 46 |
| Conread position: | 1-677 |
| Cow position: | chr28:7741470-7742150 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 45 |
| Conread position: | 1-678 |
| Cow position: | chr28:7827003-7827696 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 490 |
| Conread position: | 1-688 |
| Cow position: | chr28:24589876-24590584 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 480 |
| Conread position: | 1-688 |
| Cow position: | chr28:26425233-26424533 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 46 |
| Conread position: | 1-690 |
| Cow position: | chr28:484574-483864 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 42 |
| Conread position: | 1-690 |
| Cow position: | chr28:1166856-1166163 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 46 |
| Conread position: | 1-690 |
| Cow position: | chr28:1386376-1385678 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 42 |
| Conread position: | 1-690 |
| Cow position: | chr28:1954376-1955085 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 1-690 |
| Cow position: | chr28:5765775-5766461 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 26 |
| Conread position: | 1-690 |
| Cow position: | chr28:5803061-5803748 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 42 |
| Conread position: | 1-690 |
| Cow position: | chr28:5938507-5939218 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 43 |
| Conread position: | 1-690 |
| Cow position: | chr28:8719924-8719228 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 59 |
| Conread position: | 1-690 |
| Cow position: | chr28:13460996-13461698 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 139 |
| Conread position: | 1-690 |
| Cow position: | chr28:21360507-21361221 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 164 |
| Conread position: | 1-690 |
| Cow position: | chr28:22260129-22259424 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 46 |
| Conread position: | 1-690 |
| Cow position: | chr28:24668634-24669327 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 42 |
| Conread position: | 1-690 |
| Cow position: | chr28:29821018-29821716 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 46 |
| Conread position: | 2-231 |
| Cow position: | chr28:29760906-29760677 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 172, 58 |
| Conread position: | 2-388 |
| Cow position: | chr28:12151328-12151734 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 274 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 2-404 |
| Cow position: | chr28:33247049-33246647 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 73, 46 |
| Conread position: | 2-677 |
| Cow position: | chr28:10646392-10645721 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 32 |
| Conread position: | 2-690 |
| Cow position: | chr28:7811473-7812150 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 44 |
| Conread position: | 3-375 |
| Cow position: | chr28:7788870-7788491 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 40 |
| Conread position: | 7-304 |
| Cow position: | chr28:1813835-1813539 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 210, 37 |
| Conread position: | 9-216 |
| Cow position: | chr28:10581060-10580852 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 134, 35 |
| Conread position: | 9-305 |
| Cow position: | chr28:10470537-10470838 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 162, 111 |
| Conread position: | 9-689 |
| Cow position: | chr28:5750677-5749974 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 38 |
| Conread position: | 9-690 |
| Cow position: | chr28:1505897-1506596 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 34 |
| Conread position: | 9-690 |
| Cow position: | chr28:3191225-3190522 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 38 |
| Conread position: | 9-690 |
| Cow position: | chr28:5799328-5800021 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 34 |
| Conread position: | 9-690 |
| Cow position: | chr28:8380092-8380767 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 226 |
| Conread position: | 9-690 |
| Cow position: | chr28:12409204-12408497 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 38 |
| Conread position: | 9-690 |
| Cow position: | chr28:14704357-14703653 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 9-690 |
| Cow position: | chr28:15035086-15034382 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 101 |
| Conread position: | 9-690 |
| Cow position: | chr28:18519419-18518717 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 39 |
| Conread position: | 9-690 |
| Cow position: | chr28:32791347-32790669 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 38 |
| Conread position: | 11-690 |
| Cow position: | chr28:7003028-7003726 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 36 |
| Conread position: | 18-690 |
| Cow position: | chr28:2085494-2086195 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 19-690 |
| Cow position: | chr28:17381814-17381140 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 20 |
| Conread position: | 21-432 |
| Cow position: | chr28:10496487-10496074 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 39 |
| Conread position: | 25-690 |
| Cow position: | chr28:33253369-33254044 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 23 |
| Conread position: | 28-469 |
| Cow position: | chr28:14232882-14232409 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 329 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 54, 20 |
| Conread position: | 38-690 |
| Cow position: | chr28:21566507-21567170 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 122 |
| Conread position: | 46-690 |
| Cow position: | chr28:6778879-6778211 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 434 |
| Conread position: | 51-690 |
| Cow position: | chr28:22232209-22231561 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 288 |
| Conread position: | 54-674 |
| Cow position: | chr28:14194462-14193859 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 47 |
| Conread position: | 57-392 |
| Cow position: | chr28:5913381-5913034 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 78, 23 |
| Conread position: | 64-690 |
| Cow position: | chr28:783740-784387 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 11 |
| Conread position: | 68-690 |
| Cow position: | chr28:25760590-25761194 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 34 |
| Conread position: | 76-603 |
| Cow position: | chr28:5567235-5567767 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 99 |
| Conread position: | 100-683 |
| Cow position: | chr28:17389520-17390124 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 375 |
| Conread position: | 128-310 |
| Cow position: | chr28:698392-698587 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 137-677 |
| Cow position: | chr28:12648526-12647974 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 34 |
| Conread position: | 218-546 |
| Cow position: | chr28:9337279-9336948 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 7, 11 |
| Conread position: | 227-641 |
| Cow position: | chr28:32269942-32270353 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 73, 88 |
| Conread position: | 228-595 |
| Cow position: | chr28:19946451-19946073 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 51, 164 |
| Conread position: | 228-690 |
| Cow position: | chr28:2117235-2117724 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 64 |
| Conread position: | 228-690 |
| Cow position: | chr28:10580624-10580142 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 228 |
| Conread position: | 237-677 |
| Cow position: | chr28:18100217-18099782 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 241-641 |
| Cow position: | chr28:6786532-6786930 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 221 |
| Conread position: | 242-690 |
| Cow position: | chr28:15684729-15685197 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 50 |
| Conread position: | 244-690 |
| Cow position: | chr28:34595503-34595962 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 19 |
| Conread position: | 251-690 |
| Cow position: | chr28:1459371-1459825 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 223 |
| Conread position: | 261-690 |
| Cow position: | chr28:6537524-6537080 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 213 |
| Conread position: | 274-557 |
| Cow position: | chr28:14752085-14752382 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 199 |
| Conread position: | 283-650 |
| Cow position: | chr28:10470978-10471359 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 180 |
| Conread position: | 287-493 |
| Cow position: | chr28:24884233-24884439 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 79, 44 |
| Conread position: | 288-589 |
| Cow position: | chr28:5112807-5112495 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 182 |
Show alignments to all cow chromosomes.