Cow genome map
Conread name: | Pig4-TMW8008H19 |
Conread position: | 1-199 |
Cow position: | chr29:6265287-6265082 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 153 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 1-282 |
Cow position: | chr29:27262909-27262625 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 208 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 74, 43 |
Conread position: | 1-314 |
Cow position: | chr29:16111368-16111698 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 233 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 56, 134 |
Conread position: | 1-338 |
Cow position: | chr29:43323545-43323888 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 127 |
Conread position: | 1-386 |
Cow position: | chr29:47450-47043 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 45 |
Conread position: | 1-388 |
Cow position: | chr29:10822996-10822592 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 47 |
Conread position: | 1-446 |
Cow position: | chr29:45586388-45585952 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 44 |
Conread position: | 1-451 |
Cow position: | chr29:31096395-31095925 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 42 |
Conread position: | 1-530 |
Cow position: | chr29:251733-252259 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 47 |
Conread position: | 1-576 |
Cow position: | chr29:18855963-18855365 (view UCSC Genome Browser custom track) |
Alignm length: | 602 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 42 |
Conread position: | 1-580 |
Cow position: | chr29:21426041-21425440 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 449 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 387 |
Conread position: | 1-587 |
Cow position: | chr29:42939212-42938611 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 483 |
Conread position: | 1-666 |
Cow position: | chr29:6213512-6214170 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 42 |
Conread position: | 1-668 |
Cow position: | chr29:5981727-5981049 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 505 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 45 |
Conread position: | 1-670 |
Cow position: | chr29:15997679-15996978 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 516 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 186 |
Conread position: | 1-678 |
Cow position: | chr29:3176427-3175771 (view UCSC Genome Browser custom track) |
Alignm length: | 696 |
Alignm identity: | 472 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 15 |
Conread position: | 1-685 |
Cow position: | chr29:32558760-32558062 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 506 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 42 |
Conread position: | 1-689 |
Cow position: | chr29:14085141-14084435 (view UCSC Genome Browser custom track) |
Alignm length: | 719 |
Alignm identity: | 542 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 134 |
Conread position: | 1-690 |
Cow position: | chr29:2100837-2101533 (view UCSC Genome Browser custom track) |
Alignm length: | 706 |
Alignm identity: | 527 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 287, 23 |
Conread position: | 1-690 |
Cow position: | chr29:5958587-5959269 (view UCSC Genome Browser custom track) |
Alignm length: | 703 |
Alignm identity: | 498 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 41 |
Conread position: | 1-690 |
Cow position: | chr29:7845374-7846084 (view UCSC Genome Browser custom track) |
Alignm length: | 714 |
Alignm identity: | 509 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 42 |
Conread position: | 1-690 |
Cow position: | chr29:13583067-13583775 (view UCSC Genome Browser custom track) |
Alignm length: | 714 |
Alignm identity: | 520 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 32 |
Conread position: | 1-690 |
Cow position: | chr29:14210581-14209858 (view UCSC Genome Browser custom track) |
Alignm length: | 733 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 45 |
Conread position: | 1-690 |
Cow position: | chr29:14586908-14587613 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 530 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 74 |
Conread position: | 1-690 |
Cow position: | chr29:19622296-19621578 (view UCSC Genome Browser custom track) |
Alignm length: | 724 |
Alignm identity: | 536 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 47 |
Conread position: | 1-690 |
Cow position: | chr29:19654616-19655312 (view UCSC Genome Browser custom track) |
Alignm length: | 710 |
Alignm identity: | 526 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 45 |
Conread position: | 1-690 |
Cow position: | chr29:20252152-20252859 (view UCSC Genome Browser custom track) |
Alignm length: | 717 |
Alignm identity: | 520 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 297 |
Conread position: | 1-690 |
Cow position: | chr29:23977108-23977817 (view UCSC Genome Browser custom track) |
Alignm length: | 715 |
Alignm identity: | 529 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 151 |
Conread position: | 1-690 |
Cow position: | chr29:25931553-25930827 (view UCSC Genome Browser custom track) |
Alignm length: | 728 |
Alignm identity: | 530 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 495 |
Conread position: | 1-690 |
Cow position: | chr29:27979937-27979227 (view UCSC Genome Browser custom track) |
Alignm length: | 715 |
Alignm identity: | 505 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 42 |
Conread position: | 1-690 |
Cow position: | chr29:32541081-32541788 (view UCSC Genome Browser custom track) |
Alignm length: | 716 |
Alignm identity: | 519 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 47 |
Conread position: | 1-690 |
Cow position: | chr29:34798822-34798117 (view UCSC Genome Browser custom track) |
Alignm length: | 709 |
Alignm identity: | 520 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 48 |
Conread position: | 1-690 |
Cow position: | chr29:38227965-38228671 (view UCSC Genome Browser custom track) |
Alignm length: | 713 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 46 |
Conread position: | 1-690 |
Cow position: | chr29:39078718-39078017 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 526 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 46 |
Conread position: | 1-690 |
Cow position: | chr29:40501993-40501313 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 519 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 47 |
Conread position: | 1-690 |
Cow position: | chr29:42803398-42804085 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 42 |
Conread position: | 1-690 |
Cow position: | chr29:45460710-45461440 (view UCSC Genome Browser custom track) |
Alignm length: | 733 |
Alignm identity: | 532 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 500 |
Conread position: | 2-336 |
Cow position: | chr29:35297821-35298151 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 243 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 177, 41 |
Conread position: | 2-402 |
Cow position: | chr29:9642772-9642384 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 286 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 293, 41 |
Conread position: | 2-419 |
Cow position: | chr29:35814987-35814550 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 41 |
Conread position: | 2-664 |
Cow position: | chr29:32891774-32892443 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 490 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 45 |
Conread position: | 2-677 |
Cow position: | chr29:15946835-15946152 (view UCSC Genome Browser custom track) |
Alignm length: | 706 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 46 |
Conread position: | 2-686 |
Cow position: | chr29:8664499-8665195 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 521 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 47 |
Conread position: | 2-689 |
Cow position: | chr29:609637-608955 (view UCSC Genome Browser custom track) |
Alignm length: | 706 |
Alignm identity: | 491 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 239, 41 |
Conread position: | 2-690 |
Cow position: | chr29:13622857-13622164 (view UCSC Genome Browser custom track) |
Alignm length: | 713 |
Alignm identity: | 510 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 41 |
Conread position: | 3-690 |
Cow position: | chr29:31182393-31183096 (view UCSC Genome Browser custom track) |
Alignm length: | 711 |
Alignm identity: | 513 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 40 |
Conread position: | 7-429 |
Cow position: | chr29:2465872-2465423 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 208 |
Conread position: | 7-595 |
Cow position: | chr29:38237532-38236935 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 415 |
Conread position: | 7-677 |
Cow position: | chr29:2949364-2948699 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 467 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 39 |
Conread position: | 7-690 |
Cow position: | chr29:16023563-16024257 (view UCSC Genome Browser custom track) |
Alignm length: | 701 |
Alignm identity: | 520 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 50 |
Conread position: | 8-690 |
Cow position: | chr29:26163838-26163139 (view UCSC Genome Browser custom track) |
Alignm length: | 706 |
Alignm identity: | 534 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 38 |
Conread position: | 9-369 |
Cow position: | chr29:7430223-7429841 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 38 |
Conread position: | 9-498 |
Cow position: | chr29:10647254-10646753 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 38 |
Conread position: | 12-690 |
Cow position: | chr29:2691162-2691856 (view UCSC Genome Browser custom track) |
Alignm length: | 700 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 285 |
Conread position: | 19-690 |
Cow position: | chr29:45205505-45206224 (view UCSC Genome Browser custom track) |
Alignm length: | 725 |
Alignm identity: | 526 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 28 |
Conread position: | 44-690 |
Cow position: | chr29:38207647-38206970 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 482 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 446 |
Conread position: | 47-543 |
Cow position: | chr29:3328365-3328886 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 437 |
Conread position: | 57-690 |
Cow position: | chr29:2747395-2746769 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 486 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 77 |
Conread position: | 60-676 |
Cow position: | chr29:14112589-14113222 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 455 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 91 |
Conread position: | 68-690 |
Cow position: | chr29:2840287-2839649 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 480 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 36 |
Conread position: | 74-545 |
Cow position: | chr29:3699017-3699487 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 40 |
Conread position: | 76-680 |
Cow position: | chr29:30259464-30258866 (view UCSC Genome Browser custom track) |
Alignm length: | 616 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 78 |
Conread position: | 81-397 |
Cow position: | chr29:32804486-32804810 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 237 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 61, 45 |
Conread position: | 110-544 |
Cow position: | chr29:42092856-42093313 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 20 |
Conread position: | 116-690 |
Cow position: | chr29:16345306-16345906 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 186 |
Conread position: | 117-690 |
Cow position: | chr29:5236118-5236715 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 366 |
Conread position: | 186-690 |
Cow position: | chr29:6264829-6264306 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 86 |
Conread position: | 197-536 |
Cow position: | chr29:6198567-6198213 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 253 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 23, 48 |
Conread position: | 227-676 |
Cow position: | chr29:19953847-19954300 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 179 |
Conread position: | 228-686 |
Cow position: | chr29:36635167-36634693 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 41 |
Conread position: | 236-690 |
Cow position: | chr29:647052-647500 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 55 |
Conread position: | 236-690 |
Cow position: | chr29:35298141-35298604 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 133 |
Conread position: | 238-690 |
Cow position: | chr29:21431625-21431158 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 236 |
Conread position: | 242-690 |
Cow position: | chr29:27180522-27180059 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 232 |
Conread position: | 262-690 |
Cow position: | chr29:27262466-27262017 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 156 |
Conread position: | 264-690 |
Cow position: | chr29:10023079-10022638 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 210 |
Conread position: | 266-629 |
Cow position: | chr29:29503004-29502626 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 208 |
Conread position: | 276-690 |
Cow position: | chr29:409979-409568 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 194 |
Conread position: | 288-690 |
Cow position: | chr29:13851593-13851184 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 183 |
Conread position: | 300-690 |
Cow position: | chr29:32287540-32287940 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 167 |
Conread position: | 363-690 |
Cow position: | chr29:9641423-9641091 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 102 |
Conread position: | 472-690 |
Cow position: | chr29:27812566-27812777 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 174 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 28, 71 |
Conread position: | 529-690 |
Cow position: | chr29:17406659-17406818 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 126 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 541-690 |
Cow position: | chr29:9082340-9082193 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 120 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.