Cow genome map
| Conread name: | Pig4-TMW8008H19 |
| Conread position: | 1-299 |
| Cow position: | chr4:14776161-14776465 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 173, 64 |
| Conread position: | 1-301 |
| Cow position: | chr4:27334422-27334724 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 113, 42 |
| Conread position: | 1-336 |
| Cow position: | chr4:603726-604068 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 243 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 179, 42 |
| Conread position: | 1-352 |
| Cow position: | chr4:41333410-41333755 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 220, 44 |
| Conread position: | 1-390 |
| Cow position: | chr4:11836953-11836592 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 167, 38 |
| Conread position: | 1-397 |
| Cow position: | chr4:967371-966952 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 287 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 176, 42 |
| Conread position: | 1-554 |
| Cow position: | chr4:4177979-4178524 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 42 |
| Conread position: | 1-599 |
| Cow position: | chr4:31564600-31563961 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 91 |
| Conread position: | 1-609 |
| Cow position: | chr4:69521265-69521851 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 44 |
| Conread position: | 1-619 |
| Cow position: | chr4:45106167-45106809 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 1-662 |
| Cow position: | chr4:54969426-54970091 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 97 |
| Conread position: | 1-677 |
| Cow position: | chr4:20604433-20605082 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 101 |
| Conread position: | 1-678 |
| Cow position: | chr4:32212879-32213573 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 42 |
| Conread position: | 1-680 |
| Cow position: | chr4:17093157-17092461 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 42 |
| Conread position: | 1-689 |
| Cow position: | chr4:36897082-36897788 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 47 |
| Conread position: | 1-689 |
| Cow position: | chr4:44780516-44779808 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 1-690 |
| Cow position: | chr4:159867-160570 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 297 |
| Conread position: | 1-690 |
| Cow position: | chr4:356618-357318 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 46 |
| Conread position: | 1-690 |
| Cow position: | chr4:530108-530831 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 301 |
| Conread position: | 1-690 |
| Cow position: | chr4:1049555-1048851 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 179 |
| Conread position: | 1-690 |
| Cow position: | chr4:1929934-1929229 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 42 |
| Conread position: | 1-690 |
| Cow position: | chr4:3126505-3127224 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-690 |
| Cow position: | chr4:5444127-5443412 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 484 |
| Conread position: | 1-690 |
| Cow position: | chr4:5880862-5881568 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 42 |
| Conread position: | 1-690 |
| Cow position: | chr4:6489654-6488953 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 46 |
| Conread position: | 1-690 |
| Cow position: | chr4:9847516-9846794 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 1-690 |
| Cow position: | chr4:10882256-10882961 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 46 |
| Conread position: | 1-690 |
| Cow position: | chr4:13494028-13494745 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 154 |
| Conread position: | 1-690 |
| Cow position: | chr4:16639320-16640023 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 46 |
| Conread position: | 1-690 |
| Cow position: | chr4:17925255-17924548 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 46 |
| Conread position: | 1-690 |
| Cow position: | chr4:18423816-18423109 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 1-690 |
| Cow position: | chr4:26877073-26876375 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 46 |
| Conread position: | 1-690 |
| Cow position: | chr4:30471938-30472626 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 42 |
| Conread position: | 1-690 |
| Cow position: | chr4:33072111-33071429 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 46 |
| Conread position: | 1-690 |
| Cow position: | chr4:33494299-33494968 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 74 |
| Conread position: | 1-690 |
| Cow position: | chr4:34178530-34177836 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 46 |
| Conread position: | 1-690 |
| Cow position: | chr4:43318933-43318223 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 46 |
| Conread position: | 1-690 |
| Cow position: | chr4:43881815-43882518 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 45 |
| Conread position: | 1-690 |
| Cow position: | chr4:44726303-44726991 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 47 |
| Conread position: | 1-690 |
| Cow position: | chr4:60263456-60262752 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 19 |
| Conread position: | 1-690 |
| Cow position: | chr4:67681901-67682610 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 45 |
| Conread position: | 2-333 |
| Cow position: | chr4:27294609-27294255 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 144, 41 |
| Conread position: | 2-338 |
| Cow position: | chr4:45298375-45298046 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 80, 73 |
| Conread position: | 2-582 |
| Cow position: | chr4:493892-493330 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 40 |
| Conread position: | 2-685 |
| Cow position: | chr4:18337573-18338262 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 41 |
| Conread position: | 2-690 |
| Cow position: | chr4:41955463-41956176 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 274 |
| Conread position: | 3-654 |
| Cow position: | chr4:51042579-51041915 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 40 |
| Conread position: | 3-658 |
| Cow position: | chr4:5926134-5925470 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 71 |
| Conread position: | 9-690 |
| Cow position: | chr4:12240506-12239811 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 257 |
| Conread position: | 9-690 |
| Cow position: | chr4:12588047-12588740 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 37 |
| Conread position: | 9-690 |
| Cow position: | chr4:16360632-16361334 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 39 |
| Conread position: | 9-690 |
| Cow position: | chr4:25598782-25598073 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 38 |
| Conread position: | 9-690 |
| Cow position: | chr4:57984696-57985404 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 478 |
| Conread position: | 10-690 |
| Cow position: | chr4:6206312-6207013 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 129 |
| Conread position: | 11-345 |
| Cow position: | chr4:54239690-54240027 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 65, 9 |
| Conread position: | 12-677 |
| Cow position: | chr4:14820154-14819505 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 172 |
| Conread position: | 15-297 |
| Cow position: | chr4:49716389-49716683 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 29-690 |
| Cow position: | chr4:99482-98805 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 43-519 |
| Cow position: | chr4:46665272-46665775 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 95 |
| Conread position: | 46-409 |
| Cow position: | chr4:28832324-28832676 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 14 |
| Conread position: | 46-690 |
| Cow position: | chr4:41959646-41960312 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 46 |
| Conread position: | 47-422 |
| Cow position: | chr4:44924778-44924390 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 47-690 |
| Cow position: | chr4:14755904-14755258 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 67 |
| Conread position: | 57-352 |
| Cow position: | chr4:27300721-27300417 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 67 |
| Conread position: | 60-690 |
| Cow position: | chr4:4416822-4417465 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 64-460 |
| Cow position: | chr4:68110265-68109846 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 308 |
| Conread position: | 81-690 |
| Cow position: | chr4:19005526-19004918 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 28 |
| Conread position: | 81-690 |
| Cow position: | chr4:42405390-42406028 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 115 |
| Conread position: | 92-343 |
| Cow position: | chr4:33469660-33469922 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 94, 64 |
| Conread position: | 117-302 |
| Cow position: | chr4:48027639-48027832 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 61, 36 |
| Conread position: | 117-690 |
| Cow position: | chr4:34183803-34183265 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 57 |
| Conread position: | 118-690 |
| Cow position: | chr4:6567208-6567792 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 117 |
| Conread position: | 155-429 |
| Cow position: | chr4:9647234-9647520 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 67, 142 |
| Conread position: | 155-486 |
| Cow position: | chr4:41191744-41191390 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 280 |
| Conread position: | 164-554 |
| Cow position: | chr4:57957864-57958253 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 98 |
| Conread position: | 165-452 |
| Cow position: | chr4:41428179-41428486 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 9, 18 |
| Conread position: | 215-690 |
| Cow position: | chr4:20067790-20067314 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 17 |
| Conread position: | 220-690 |
| Cow position: | chr4:9355311-9355792 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 35 |
| Conread position: | 227-487 |
| Cow position: | chr4:14138981-14139248 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 236-678 |
| Cow position: | chr4:47522305-47522749 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 211 |
| Conread position: | 257-690 |
| Cow position: | chr4:49716756-49717184 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 8 |
| Conread position: | 287-690 |
| Cow position: | chr4:6865503-6865095 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 142 |
| Conread position: | 291-690 |
| Cow position: | chr4:21359233-21359645 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 175 |
| Conread position: | 549-690 |
| Cow position: | chr4:43867466-43867607 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.