Cow genome map
| Conread name: | Pig4-TMW8010I17 |
| Conread position: | 1-170 |
| Cow position: | chr14:29698384-29698208 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 13, 17 |
| Conread position: | 1-266 |
| Cow position: | chr14:23682240-23682512 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 71, 11 |
| Conread position: | 7-232 |
| Cow position: | chr14:15997786-15997555 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 65, 141 |
| Conread position: | 9-266 |
| Cow position: | chr14:15055011-15054738 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 11-238 |
| Cow position: | chr14:47591931-47591700 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 53, 73 |
| Conread position: | 13-145 |
| Cow position: | chr14:2038823-2038690 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 80 |
| Conread position: | 13-184 |
| Cow position: | chr14:33300689-33300869 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 13-214 |
| Cow position: | chr14:10631134-10630931 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 59, 93 |
| Conread position: | 13-215 |
| Cow position: | chr14:15492578-15492791 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 13-218 |
| Cow position: | chr14:3162712-3162907 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 13-219 |
| Cow position: | chr14:36254711-36254508 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 163 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 13-224 |
| Cow position: | chr14:19618766-19618548 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 59, 112 |
| Conread position: | 13-238 |
| Cow position: | chr14:7290785-7291010 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 74, 101 |
| Conread position: | 13-238 |
| Cow position: | chr14:26433257-26433026 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 57, 144 |
| Conread position: | 13-243 |
| Cow position: | chr14:10078253-10078491 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 59, 171 |
| Conread position: | 13-253 |
| Cow position: | chr14:19189029-19189274 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 59, 110 |
| Conread position: | 13-261 |
| Cow position: | chr14:16760385-16760642 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 82, 127 |
| Conread position: | 13-263 |
| Cow position: | chr14:42154986-42154716 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 11 |
| Conread position: | 13-264 |
| Cow position: | chr14:38338149-38337898 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 195 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 13-264 |
| Cow position: | chr14:39778737-39778999 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 143 |
| Conread position: | 13-264 |
| Cow position: | chr14:41210840-41211102 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 122 |
| Conread position: | 13-265 |
| Cow position: | chr14:41749774-41749516 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 105 |
| Conread position: | 13-266 |
| Cow position: | chr14:1646198-1645941 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 13-266 |
| Cow position: | chr14:8541227-8540968 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 223 |
| Conread position: | 13-266 |
| Cow position: | chr14:9308215-9308473 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 13-266 |
| Cow position: | chr14:13845970-13846234 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-266 |
| Cow position: | chr14:18345743-18345482 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 19 |
| Conread position: | 13-266 |
| Cow position: | chr14:19372324-19372591 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 13-266 |
| Cow position: | chr14:20640644-20640376 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 13-266 |
| Cow position: | chr14:26442355-26442090 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 13-266 |
| Cow position: | chr14:28115202-28114935 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-266 |
| Cow position: | chr14:29632897-29632635 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 17 |
| Conread position: | 13-266 |
| Cow position: | chr14:33791176-33791437 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 13-266 |
| Cow position: | chr14:34199858-34199594 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-266 |
| Cow position: | chr14:35381576-35381836 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 13-266 |
| Cow position: | chr14:37103195-37103458 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 51, 60 |
| Conread position: | 13-266 |
| Cow position: | chr14:45677215-45677471 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 59, 50 |
| Conread position: | 13-267 |
| Cow position: | chr14:24796448-24796175 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-282 |
| Cow position: | chr14:3564269-3564539 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 60, 164 |
| Conread position: | 13-282 |
| Cow position: | chr14:8784181-8784444 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 15-243 |
| Cow position: | chr14:20826477-20826697 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 54, 76 |
| Conread position: | 15-266 |
| Cow position: | chr14:22989021-22989282 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 44 |
| Conread position: | 15-267 |
| Cow position: | chr14:27791531-27791779 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 22-266 |
| Cow position: | chr14:37131647-37131906 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 23-266 |
| Cow position: | chr14:33751530-33751759 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 49, 68 |
| Conread position: | 27-266 |
| Cow position: | chr14:39770234-39769982 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 5 |
| Conread position: | 28-266 |
| Cow position: | chr14:27591957-27591707 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 44, 160 |
| Conread position: | 33-262 |
| Cow position: | chr14:13042760-13043005 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 50-266 |
| Cow position: | chr14:20483435-20483219 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 144 |
| Conread position: | 57-266 |
| Cow position: | chr14:24580957-24581172 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 16, 78 |
| Conread position: | 60-265 |
| Cow position: | chr14:9029626-9029438 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 72-238 |
| Cow position: | chr14:35544465-35544300 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 10, 67 |
| Conread position: | 95-266 |
| Cow position: | chr14:13006580-13006754 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 110 |
| Conread position: | 101-266 |
| Cow position: | chr14:30926788-30926952 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 141, 29 |
Show alignments to all cow chromosomes.