Cow genome map
| Conread name: | Pig4-TMW8010I17 |
| Conread position: | 1-170 |
| Cow position: | chr15:6232994-6232819 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-262 |
| Cow position: | chr15:33643112-33643376 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 1-266 |
| Cow position: | chr15:29340085-29340356 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 14 |
| Conread position: | 1-266 |
| Cow position: | chr15:47042607-47042343 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 70, 14 |
| Conread position: | 12-260 |
| Cow position: | chr15:6530817-6530555 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 161 |
| Conread position: | 13-170 |
| Cow position: | chr15:14888613-14888444 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-189 |
| Cow position: | chr15:51307650-51307464 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-193 |
| Cow position: | chr15:30470940-30470750 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-202 |
| Cow position: | chr15:17337394-17337587 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-214 |
| Cow position: | chr15:53716466-53716673 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 13-224 |
| Cow position: | chr15:10737712-10737498 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 59, 107 |
| Conread position: | 13-229 |
| Cow position: | chr15:6905108-6905317 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 59, 126 |
| Conread position: | 13-234 |
| Cow position: | chr15:36887867-36888084 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 59, 80 |
| Conread position: | 13-235 |
| Cow position: | chr15:8354073-8354305 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 179 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-237 |
| Cow position: | chr15:25906939-25907172 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 59, 170 |
| Conread position: | 13-246 |
| Cow position: | chr15:275688-275916 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 13-254 |
| Cow position: | chr15:244813-245056 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 13-259 |
| Cow position: | chr15:41125540-41125280 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-260 |
| Cow position: | chr15:41360918-41360674 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 75, 60 |
| Conread position: | 13-262 |
| Cow position: | chr15:30047514-30047249 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 13-264 |
| Cow position: | chr15:11658541-11658273 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 65 |
| Conread position: | 13-264 |
| Cow position: | chr15:26896662-26896419 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 95, 70 |
| Conread position: | 13-265 |
| Cow position: | chr15:16822970-16823230 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 13-266 |
| Cow position: | chr15:1722818-1722557 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 73, 124 |
| Conread position: | 13-266 |
| Cow position: | chr15:5683177-5683428 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 73, 51 |
| Conread position: | 13-266 |
| Cow position: | chr15:6462465-6462208 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 62, 115 |
| Conread position: | 13-266 |
| Cow position: | chr15:9928391-9928652 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 59, 186 |
| Conread position: | 13-266 |
| Cow position: | chr15:11011571-11011315 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 223 |
| Conread position: | 13-266 |
| Cow position: | chr15:16307454-16307710 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 88 |
| Conread position: | 13-266 |
| Cow position: | chr15:17762941-17763194 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 69, 22 |
| Conread position: | 13-266 |
| Cow position: | chr15:20391243-20390984 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 177 |
| Conread position: | 13-266 |
| Cow position: | chr15:22532284-22532535 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 50 |
| Conread position: | 13-266 |
| Cow position: | chr15:23568095-23567832 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 56, 124 |
| Conread position: | 13-266 |
| Cow position: | chr15:24967826-24968086 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 54, 93 |
| Conread position: | 13-266 |
| Cow position: | chr15:24994481-24994231 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 60, 140 |
| Conread position: | 13-266 |
| Cow position: | chr15:33306142-33306402 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 202 |
| Conread position: | 13-266 |
| Cow position: | chr15:36259572-36259308 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 249 |
| Conread position: | 13-266 |
| Cow position: | chr15:39598274-39598532 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 107 |
| Conread position: | 13-266 |
| Cow position: | chr15:47844061-47843813 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 59, 94 |
| Conread position: | 13-266 |
| Cow position: | chr15:49257896-49258171 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 59, 120 |
| Conread position: | 13-267 |
| Cow position: | chr15:25208725-25208470 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 137 |
| Conread position: | 13-283 |
| Cow position: | chr15:21907967-21908249 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 13-287 |
| Cow position: | chr15:42789116-42788835 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 59, 147 |
| Conread position: | 14-238 |
| Cow position: | chr15:13515399-13515633 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 14-263 |
| Cow position: | chr15:1301169-1301431 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 15-266 |
| Cow position: | chr15:29604666-29604423 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 58, 81 |
| Conread position: | 17-237 |
| Cow position: | chr15:38877268-38877043 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 121 |
| Conread position: | 17-240 |
| Cow position: | chr15:23275578-23275801 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 103 |
| Conread position: | 18-222 |
| Cow position: | chr15:26079316-26079115 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 54, 7 |
| Conread position: | 27-234 |
| Cow position: | chr15:46563438-46563233 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 27-266 |
| Cow position: | chr15:10456969-10456716 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 29-238 |
| Cow position: | chr15:38103837-38103629 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 160 |
| Conread position: | 33-265 |
| Cow position: | chr15:24305430-24305185 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 39, 129 |
| Conread position: | 34-199 |
| Cow position: | chr15:2380406-2380582 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 41-266 |
| Cow position: | chr15:46610992-46611213 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 32, 79 |
| Conread position: | 81-266 |
| Cow position: | chr15:21421047-21421236 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 101, 20 |
| Conread position: | 92-263 |
| Cow position: | chr15:42415376-42415549 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 95-266 |
| Cow position: | chr15:12723209-12723380 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 81, 6 |
| Conread position: | 95-266 |
| Cow position: | chr15:50341242-50341409 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 96-266 |
| Cow position: | chr15:5658283-5658457 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 144, 42 |
| Conread position: | 120-266 |
| Cow position: | chr15:33678847-33678989 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 115, 32 |
| Conread position: | 142-266 |
| Cow position: | chr15:21903278-21903155 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.