Cow genome map

Conread name: Pig4-TMW8010I17

Conread position: 1-266
Cow position: chr16:9973433-9973707 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 71, 13

Conread position: 1-266
Cow position: chr16:13611388-13611655 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 71, 11

Conread position: 1-266
Cow position: chr16:16096802-16096532 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 13, 23

Conread position: 13-153
Cow position: chr16:34220244-34220093 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 13-165
Cow position: chr16:11660403-11660549 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 13-171
Cow position: chr16:45122093-45121930 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 13-187
Cow position: chr16:39401956-39402123 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 60, 108

Conread position: 13-194
Cow position: chr16:30369405-30369221 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 167

Conread position: 13-198
Cow position: chr16:54709981-54710169 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 93

Conread position: 13-199
Cow position: chr16:41578284-41578089 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 13-217
Cow position: chr16:48493238-48493024 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 13-219
Cow position: chr16:12320279-12320065 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 68, 125

Conread position: 13-222
Cow position: chr16:17945579-17945362 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 59, 169

Conread position: 13-233
Cow position: chr16:7550026-7549797 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 59, 149

Conread position: 13-233
Cow position: chr16:22123912-22124124 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 177
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 60, 23

Conread position: 13-237
Cow position: chr16:11806729-11806501 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 55, 111

Conread position: 13-238
Cow position: chr16:5363959-5363720 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 45, 0

Conread position: 13-238
Cow position: chr16:56231885-56231651 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 113

Conread position: 13-248
Cow position: chr16:17289005-17288754 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 0

Conread position: 13-257
Cow position: chr16:24855597-24855344 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 59, 16

Conread position: 13-260
Cow position: chr16:14685335-14685588 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 59, 0

Conread position: 13-260
Cow position: chr16:16552619-16552363 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 51, 121

Conread position: 13-262
Cow position: chr16:45678036-45677774 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 207
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 55, 136

Conread position: 13-263
Cow position: chr16:13752074-13752325 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 13-263
Cow position: chr16:26649571-26649836 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 13-264
Cow position: chr16:39474094-39474341 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 60, 104

Conread position: 13-264
Cow position: chr16:48398196-48398449 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 131

Conread position: 13-265
Cow position: chr16:41752519-41752777 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 23

Conread position: 13-265
Cow position: chr16:47643472-47643215 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 186

Conread position: 13-266
Cow position: chr16:4626333-4626600 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 126

Conread position: 13-266
Cow position: chr16:11615187-11615433 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 59, 80

Conread position: 13-266
Cow position: chr16:12060474-12060208 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 58, 0

Conread position: 13-266
Cow position: chr16:13306814-13307071 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 73, 119

Conread position: 13-266
Cow position: chr16:13689724-13689459 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 205

Conread position: 13-266
Cow position: chr16:13990033-13989778 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 129

Conread position: 13-266
Cow position: chr16:19003475-19003725 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 62, 89

Conread position: 13-266
Cow position: chr16:19408470-19408717 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 56, 83

Conread position: 13-266
Cow position: chr16:23729866-23730144 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 209
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 62, 0

Conread position: 13-266
Cow position: chr16:25839678-25839412 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 255

Conread position: 13-266
Cow position: chr16:28922831-28922583 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 67

Conread position: 13-266
Cow position: chr16:29608567-29608313 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 41

Conread position: 13-266
Cow position: chr16:33226481-33226737 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 11

Conread position: 13-266
Cow position: chr16:39695425-39695682 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 97

Conread position: 13-266
Cow position: chr16:40562290-40562022 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 13-266
Cow position: chr16:42078790-42079047 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 19

Conread position: 13-266
Cow position: chr16:43800859-43801114 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 207

Conread position: 13-266
Cow position: chr16:47820625-47820366 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 68, 24

Conread position: 13-266
Cow position: chr16:48340636-48340897 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 176

Conread position: 13-266
Cow position: chr16:50289210-50288952 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 216

Conread position: 13-266
Cow position: chr16:52834830-52835086 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 145

Conread position: 13-266
Cow position: chr16:53813595-53813864 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 104

Conread position: 13-267
Cow position: chr16:33646073-33645808 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 126

Conread position: 13-267
Cow position: chr16:33704863-33704593 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 37

Conread position: 13-269
Cow position: chr16:5257054-5256789 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 145

Conread position: 13-269
Cow position: chr16:45813641-45813910 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 59, 23

Conread position: 14-169
Cow position: chr16:40514425-40514587 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 133
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 58, 149

Conread position: 14-176
Cow position: chr16:11940094-11939928 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 14-225
Cow position: chr16:4698931-4699141 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 117

Conread position: 14-237
Cow position: chr16:31079034-31079272 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 112

Conread position: 14-238
Cow position: chr16:50873113-50873340 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 14-263
Cow position: chr16:48006436-48006693 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 58, 146

Conread position: 14-266
Cow position: chr16:14106699-14106442 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 14-266
Cow position: chr16:32781420-32781157 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 67, 21

Conread position: 14-266
Cow position: chr16:45047577-45047829 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 73, 57

Conread position: 14-266
Cow position: chr16:48956855-48956592 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 56, 219

Conread position: 14-267
Cow position: chr16:27701202-27701447 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 58, 137

Conread position: 15-165
Cow position: chr16:3114595-3114434 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 15-234
Cow position: chr16:7418434-7418212 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 18

Conread position: 15-265
Cow position: chr16:39394625-39394372 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 200
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 62, 120

Conread position: 15-266
Cow position: chr16:7505145-7504894 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 57, 206

Conread position: 15-266
Cow position: chr16:8366775-8367029 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 57, 17

Conread position: 15-266
Cow position: chr16:16597613-16597357 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 160

Conread position: 15-266
Cow position: chr16:29380305-29380049 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 15-266
Cow position: chr16:31122194-31122455 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 110, 80

Conread position: 15-266
Cow position: chr16:48190956-48191206 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 21

Conread position: 16-214
Cow position: chr16:47964764-47964967 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 16-266
Cow position: chr16:42092332-42092581 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 119

Conread position: 17-266
Cow position: chr16:42778018-42777758 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 69, 131

Conread position: 18-266
Cow position: chr16:49126135-49126389 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 39

Conread position: 19-199
Cow position: chr16:9905142-9904956 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 164

Conread position: 19-266
Cow position: chr16:14125190-14124951 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 54, 99

Conread position: 20-266
Cow position: chr16:26342317-26342072 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 53, 90

Conread position: 23-267
Cow position: chr16:39514025-39514284 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 118

Conread position: 33-238
Cow position: chr16:45139709-45139496 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 33-266
Cow position: chr16:48369911-48370153 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 129

Conread position: 33-266
Cow position: chr16:50417656-50417892 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 134

Conread position: 39-266
Cow position: chr16:24148193-24147949 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 0

Conread position: 53-266
Cow position: chr16:33508071-33507858 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 172
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 20, 74

Conread position: 56-266
Cow position: chr16:50282418-50282636 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 70-266
Cow position: chr16:17745828-17745630 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 120

Conread position: 81-265
Cow position: chr16:42633767-42633952 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 133

Conread position: 90-254
Cow position: chr16:56150274-56150116 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 107

Conread position: 90-266
Cow position: chr16:31159600-31159783 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 94, 16

Conread position: 90-266
Cow position: chr16:49141591-49141763 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 10, 120

Conread position: 91-266
Cow position: chr16:9933130-9932955 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 91, 66

Conread position: 92-264
Cow position: chr16:45535149-45534980 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 23

Conread position: 92-266
Cow position: chr16:14028657-14028824 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 95-266
Cow position: chr16:14799777-14799948 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 61, 11

Conread position: 98-266
Cow position: chr16:28396132-28396301 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 80, 115

Conread position: 120-266
Cow position: chr16:8807148-8807295 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 62, 0

Conread position: 133-266
Cow position: chr16:33235202-33235340 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 107, 0

Show alignments to all cow chromosomes.