Cow genome map

Conread name: Pig4-TMW8010I17

Conread position: 1-162
Cow position: chr17:5372421-5372588 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 13

Conread position: 1-266
Cow position: chr17:11664477-11664755 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 14

Conread position: 1-267
Cow position: chr17:20157713-20157450 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 72, 14

Conread position: 7-266
Cow position: chr17:15102789-15103052 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 117

Conread position: 13-146
Cow position: chr17:25800783-25800925 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 13-150
Cow position: chr17:22016986-22017134 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 13-171
Cow position: chr17:40639045-40638882 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 13-182
Cow position: chr17:9824767-9824590 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 13-185
Cow position: chr17:11368751-11368932 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 68, 146

Conread position: 13-198
Cow position: chr17:23516844-23517037 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 13-203
Cow position: chr17:35573850-35573663 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 126

Conread position: 13-205
Cow position: chr17:21325430-21325231 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 59, 111

Conread position: 13-214
Cow position: chr17:21758043-21758257 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 60, 0

Conread position: 13-217
Cow position: chr17:35338823-35339029 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 59, 76

Conread position: 13-219
Cow position: chr17:7654354-7654568 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 176

Conread position: 13-219
Cow position: chr17:25616347-25616145 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 60, 22

Conread position: 13-220
Cow position: chr17:1040843-1040629 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 59, 88

Conread position: 13-227
Cow position: chr17:33657970-33658190 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 59, 208

Conread position: 13-228
Cow position: chr17:32138326-32138539 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 180
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 59, 122

Conread position: 13-245
Cow position: chr17:24928573-24928336 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 56, 191

Conread position: 13-254
Cow position: chr17:25815702-25815457 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 41, 142

Conread position: 13-254
Cow position: chr17:36330860-36331119 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 201
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 59, 11

Conread position: 13-258
Cow position: chr17:4968210-4967954 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 59, 138

Conread position: 13-260
Cow position: chr17:31037279-31037538 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 13-261
Cow position: chr17:5422971-5423232 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 126

Conread position: 13-261
Cow position: chr17:18490638-18490374 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 58

Conread position: 13-263
Cow position: chr17:4225402-4225652 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 19

Conread position: 13-263
Cow position: chr17:12536367-12536629 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 13-264
Cow position: chr17:265769-265494 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 44

Conread position: 13-264
Cow position: chr17:18473261-18473014 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 200
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 63, 30

Conread position: 13-265
Cow position: chr17:21003731-21003994 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 23

Conread position: 13-266
Cow position: chr17:1410140-1410407 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 13-266
Cow position: chr17:3577637-3577374 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 57, 120

Conread position: 13-266
Cow position: chr17:4105896-4106150 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 59, 123

Conread position: 13-266
Cow position: chr17:4121632-4121886 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 194
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 59, 123

Conread position: 13-266
Cow position: chr17:7810657-7810903 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 196
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 59, 83

Conread position: 13-266
Cow position: chr17:10458834-10459100 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 44, 0

Conread position: 13-266
Cow position: chr17:11172517-11172779 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 59, 116

Conread position: 13-266
Cow position: chr17:15664775-15664505 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 13-266
Cow position: chr17:15684608-15684341 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 213

Conread position: 13-266
Cow position: chr17:17059521-17059275 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 64, 38

Conread position: 13-266
Cow position: chr17:18108989-18109250 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 23

Conread position: 13-266
Cow position: chr17:18592540-18592276 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 125

Conread position: 13-266
Cow position: chr17:20090539-20090785 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 63, 117

Conread position: 13-266
Cow position: chr17:20990092-20990358 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 203
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 24, 54

Conread position: 13-266
Cow position: chr17:20992944-20993203 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 200
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 60, 37

Conread position: 13-266
Cow position: chr17:21114856-21115112 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 124

Conread position: 13-266
Cow position: chr17:24004470-24004230 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 59, 116

Conread position: 13-266
Cow position: chr17:24554094-24553840 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 78

Conread position: 13-266
Cow position: chr17:24587722-24587454 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 13-266
Cow position: chr17:24824340-24824088 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 145

Conread position: 13-266
Cow position: chr17:25901298-25901031 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 217

Conread position: 13-266
Cow position: chr17:29157514-29157254 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 60, 16

Conread position: 13-266
Cow position: chr17:29472564-29472311 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 195

Conread position: 13-266
Cow position: chr17:32273589-32273848 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 59, 210

Conread position: 13-266
Cow position: chr17:32419018-32419282 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 119

Conread position: 13-266
Cow position: chr17:32471683-32471958 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 59, 0

Conread position: 13-266
Cow position: chr17:33288559-33288818 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 125

Conread position: 13-266
Cow position: chr17:33933647-33933901 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 60, 195

Conread position: 13-266
Cow position: chr17:38615058-38614792 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 60

Conread position: 13-266
Cow position: chr17:40421769-40421504 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 59, 118

Conread position: 13-267
Cow position: chr17:32989574-32989327 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 81, 142

Conread position: 13-267
Cow position: chr17:32993526-32993779 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 142

Conread position: 14-266
Cow position: chr17:26818361-26818617 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 226, 119

Conread position: 14-266
Cow position: chr17:28284931-28285192 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 58, 130

Conread position: 15-199
Cow position: chr17:25514027-25514219 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 15-266
Cow position: chr17:908836-908582 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 149

Conread position: 15-266
Cow position: chr17:12325669-12325910 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 59, 86

Conread position: 15-266
Cow position: chr17:18860625-18860883 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 58, 192

Conread position: 24-147
Cow position: chr17:35051689-35051563 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 24-238
Cow position: chr17:17406222-17406007 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 107

Conread position: 24-266
Cow position: chr17:5767994-5767750 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 48, 112

Conread position: 28-266
Cow position: chr17:29715115-29715350 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 44, 131

Conread position: 29-266
Cow position: chr17:15333628-15333875 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 44, 182

Conread position: 33-266
Cow position: chr17:1063255-1063025 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 19, 121

Conread position: 34-266
Cow position: chr17:12447324-12447563 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 184

Conread position: 38-266
Cow position: chr17:15155118-15155352 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 9

Conread position: 41-266
Cow position: chr17:3471489-3471257 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 45-265
Cow position: chr17:21207075-21207298 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 57

Conread position: 50-180
Cow position: chr17:3371689-3371558 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 53, 117

Conread position: 53-266
Cow position: chr17:43717269-43717477 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 42

Conread position: 72-263
Cow position: chr17:4824527-4824333 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 34

Conread position: 92-266
Cow position: chr17:4606967-4606803 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 117-266
Cow position: chr17:6936675-6936827 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 23

Conread position: 120-266
Cow position: chr17:7760482-7760627 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 112, 48

Conread position: 161-266
Cow position: chr17:20269544-20269438 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 74, 0

Show alignments to all cow chromosomes.