Cow genome map

Conread name: Pig4-TMW8010I17

Conread position: 1-266
Cow position: chr18:4884486-4884752 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 68, 13

Conread position: 2-266
Cow position: chr18:20865015-20864746 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 67, 93

Conread position: 9-267
Cow position: chr18:23766381-23766654 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 265

Conread position: 12-266
Cow position: chr18:17649713-17649973 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 156

Conread position: 13-141
Cow position: chr18:43796931-43797065 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 13-143
Cow position: chr18:41950233-41950103 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 93

Conread position: 13-169
Cow position: chr18:25006469-25006628 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 13-170
Cow position: chr18:42751578-42751752 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 13-175
Cow position: chr18:49038486-49038316 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 59, 146

Conread position: 13-180
Cow position: chr18:51594780-51594952 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 119

Conread position: 13-191
Cow position: chr18:11578098-11577927 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 23

Conread position: 13-199
Cow position: chr18:8171061-8171254 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 68, 182

Conread position: 13-210
Cow position: chr18:21740791-21740990 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 60, 84

Conread position: 13-218
Cow position: chr18:16686311-16686525 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 168
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 60, 0

Conread position: 13-221
Cow position: chr18:8300043-8299822 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 176
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 59, 0

Conread position: 13-222
Cow position: chr18:30360125-30360327 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 75

Conread position: 13-234
Cow position: chr18:6103073-6103299 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 127

Conread position: 13-238
Cow position: chr18:1954565-1954798 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 59, 124

Conread position: 13-238
Cow position: chr18:29356600-29356834 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 99

Conread position: 13-238
Cow position: chr18:30341160-30341384 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 64, 34

Conread position: 13-238
Cow position: chr18:55000717-55000944 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 59, 145

Conread position: 13-256
Cow position: chr18:48713575-48713326 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 33

Conread position: 13-263
Cow position: chr18:11779677-11779432 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 121

Conread position: 13-263
Cow position: chr18:20126329-20126067 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 10

Conread position: 13-263
Cow position: chr18:20127081-20127337 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 59, 115

Conread position: 13-263
Cow position: chr18:29648808-29648547 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 13-263
Cow position: chr18:43020380-43020624 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 60, 28

Conread position: 13-263
Cow position: chr18:47512030-47511761 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 59, 118

Conread position: 13-264
Cow position: chr18:20641472-20641720 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 59, 89

Conread position: 13-264
Cow position: chr18:44801865-44802119 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 59, 142

Conread position: 13-264
Cow position: chr18:51405882-51406139 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 199

Conread position: 13-265
Cow position: chr18:5487266-5487015 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 23

Conread position: 13-266
Cow position: chr18:6310105-6309843 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 60, 16

Conread position: 13-266
Cow position: chr18:9365945-9365675 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 13-266
Cow position: chr18:9974304-9974563 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 13-266
Cow position: chr18:11685006-11684751 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 59, 144

Conread position: 13-266
Cow position: chr18:11691385-11691649 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 7

Conread position: 13-266
Cow position: chr18:15613836-15614085 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 66, 199

Conread position: 13-266
Cow position: chr18:15880820-15881094 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 59, 207

Conread position: 13-266
Cow position: chr18:17390970-17391211 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 11

Conread position: 13-266
Cow position: chr18:19619966-19619711 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 83

Conread position: 13-266
Cow position: chr18:19849733-19849988 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 39, 94

Conread position: 13-266
Cow position: chr18:25206164-25206429 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 79, 0

Conread position: 13-266
Cow position: chr18:26939007-26938746 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 66, 145

Conread position: 13-266
Cow position: chr18:28101657-28101389 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 43

Conread position: 13-266
Cow position: chr18:28923823-28924069 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 83

Conread position: 13-266
Cow position: chr18:29958140-29958384 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 193
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 59, 124

Conread position: 13-266
Cow position: chr18:33299928-33299660 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 59, 189

Conread position: 13-266
Cow position: chr18:44483749-44483996 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 59, 145

Conread position: 13-266
Cow position: chr18:45571037-45570784 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 59, 11

Conread position: 13-266
Cow position: chr18:50082233-50082482 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 83

Conread position: 13-266
Cow position: chr18:50637447-50637700 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 59, 70

Conread position: 13-267
Cow position: chr18:28657887-28658152 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 13-269
Cow position: chr18:42479562-42479832 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 13-281
Cow position: chr18:8104915-8105197 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 227

Conread position: 13-283
Cow position: chr18:29065359-29065631 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 115

Conread position: 13-299
Cow position: chr18:18592497-18592202 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 168

Conread position: 14-199
Cow position: chr18:10891537-10891345 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 14

Conread position: 14-266
Cow position: chr18:11832143-11831901 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 69

Conread position: 14-266
Cow position: chr18:30794449-30794197 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 22

Conread position: 16-266
Cow position: chr18:35537214-35537466 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 32

Conread position: 27-191
Cow position: chr18:29991500-29991680 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 27-224
Cow position: chr18:9010718-9010528 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 77, 45

Conread position: 28-266
Cow position: chr18:9557987-9557741 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 75, 12

Conread position: 29-238
Cow position: chr18:55505415-55505198 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 29-265
Cow position: chr18:10954476-10954238 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 44, 67

Conread position: 33-216
Cow position: chr18:51190592-51190777 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 39, 101

Conread position: 33-225
Cow position: chr18:44548908-44549110 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 33-263
Cow position: chr18:42432082-42432322 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 193

Conread position: 33-266
Cow position: chr18:30248132-30248365 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 191
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 30, 107

Conread position: 34-266
Cow position: chr18:45903891-45904129 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 195

Conread position: 37-170
Cow position: chr18:49841282-49841138 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 37-267
Cow position: chr18:33008063-33007818 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 39-266
Cow position: chr18:11618465-11618241 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 89

Conread position: 47-266
Cow position: chr18:42747582-42747358 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 101

Conread position: 51-266
Cow position: chr18:12117862-12118081 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 68

Conread position: 71-265
Cow position: chr18:31728-31527 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 39

Conread position: 79-266
Cow position: chr18:35076336-35076149 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 95-238
Cow position: chr18:52864375-52864520 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 101-266
Cow position: chr18:7059150-7058993 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 134, 19

Conread position: 108-266
Cow position: chr18:4624509-4624667 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 74, 20

Conread position: 129-266
Cow position: chr18:16184531-16184665 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 16

Show alignments to all cow chromosomes.