Cow genome map
| Conread name: | Pig4-TMW8010I17 |
| Conread position: | 1-266 |
| Cow position: | chr23:1883463-1883190 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 13 |
| Conread position: | 1-266 |
| Cow position: | chr23:7845361-7845086 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 13 |
| Conread position: | 2-240 |
| Cow position: | chr23:7361174-7360941 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 12 |
| Conread position: | 2-266 |
| Cow position: | chr23:11473437-11473710 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 44 |
| Conread position: | 12-266 |
| Cow position: | chr23:7596288-7596535 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 13-133 |
| Cow position: | chr23:22586939-22586820 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 39 |
| Conread position: | 13-188 |
| Cow position: | chr23:1438352-1438173 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 59, 123 |
| Conread position: | 13-197 |
| Cow position: | chr23:468406-468593 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 56, 80 |
| Conread position: | 13-197 |
| Cow position: | chr23:5732610-5732417 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 13-198 |
| Cow position: | chr23:35938405-35938208 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 13-199 |
| Cow position: | chr23:30951014-30950825 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 133 |
| Conread position: | 13-207 |
| Cow position: | chr23:3408851-3409047 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 59, 123 |
| Conread position: | 13-207 |
| Cow position: | chr23:12363558-12363761 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-222 |
| Cow position: | chr23:18286252-18286039 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 82, 145 |
| Conread position: | 13-238 |
| Cow position: | chr23:187238-187004 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 13-238 |
| Cow position: | chr23:5426493-5426257 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-238 |
| Cow position: | chr23:27290721-27290952 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 60, 92 |
| Conread position: | 13-247 |
| Cow position: | chr23:3282062-3282299 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 59, 110 |
| Conread position: | 13-260 |
| Cow position: | chr23:4968464-4968721 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-265 |
| Cow position: | chr23:8698480-8698241 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 202 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 59, 80 |
| Conread position: | 13-265 |
| Cow position: | chr23:26986212-26986476 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 5 |
| Conread position: | 13-266 |
| Cow position: | chr23:1290357-1290091 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 59, 133 |
| Conread position: | 13-266 |
| Cow position: | chr23:2501794-2502052 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 123 |
| Conread position: | 13-266 |
| Cow position: | chr23:2799640-2799363 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 59, 203 |
| Conread position: | 13-266 |
| Cow position: | chr23:6367670-6367402 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 167 |
| Conread position: | 13-266 |
| Cow position: | chr23:8063604-8063350 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 60, 96 |
| Conread position: | 13-266 |
| Cow position: | chr23:11045544-11045281 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 16 |
| Conread position: | 13-266 |
| Cow position: | chr23:12290325-12290079 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 13-266 |
| Cow position: | chr23:16881103-16881360 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 199 |
| Conread position: | 13-266 |
| Cow position: | chr23:18322367-18322623 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 13-266 |
| Cow position: | chr23:21452670-21452936 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-266 |
| Cow position: | chr23:29459039-29459292 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 13-266 |
| Cow position: | chr23:39778461-39778210 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 59, 132 |
| Conread position: | 13-266 |
| Cow position: | chr23:40502455-40502716 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 61 |
| Conread position: | 13-267 |
| Cow position: | chr23:3247648-3247384 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 34, 219 |
| Conread position: | 13-324 |
| Cow position: | chr23:16631329-16631002 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 57, 159 |
| Conread position: | 14-165 |
| Cow position: | chr23:24966404-24966559 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 118 |
| Conread position: | 14-266 |
| Cow position: | chr23:5617632-5617373 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 14-266 |
| Cow position: | chr23:5707052-5706797 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 55, 142 |
| Conread position: | 14-266 |
| Cow position: | chr23:11314976-11315220 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 58, 94 |
| Conread position: | 14-266 |
| Cow position: | chr23:20435005-20435254 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 58, 89 |
| Conread position: | 15-156 |
| Cow position: | chr23:1403748-1403896 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 15-166 |
| Cow position: | chr23:10497755-10497607 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 15-266 |
| Cow position: | chr23:24509751-24509498 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 15-266 |
| Cow position: | chr23:24867367-24867099 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 15-267 |
| Cow position: | chr23:21764980-21764713 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 206 |
| Conread position: | 16-266 |
| Cow position: | chr23:20056808-20057070 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 57, 8 |
| Conread position: | 23-266 |
| Cow position: | chr23:1776584-1776834 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 113 |
| Conread position: | 24-178 |
| Cow position: | chr23:1876760-1876597 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 24-238 |
| Cow position: | chr23:3394451-3394667 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 48, 129 |
| Conread position: | 24-266 |
| Cow position: | chr23:4980497-4980747 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 48, 38 |
| Conread position: | 24-286 |
| Cow position: | chr23:16563887-16563621 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 250 |
| Conread position: | 28-238 |
| Cow position: | chr23:12147952-12147749 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 149, 67 |
| Conread position: | 29-263 |
| Cow position: | chr23:40891406-40891161 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 174 |
| Conread position: | 38-222 |
| Cow position: | chr23:16664535-16664724 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 35, 97 |
| Conread position: | 47-238 |
| Cow position: | chr23:9711565-9711758 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 47-254 |
| Cow position: | chr23:14164372-14164591 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 26, 195 |
| Conread position: | 54-266 |
| Cow position: | chr23:14191573-14191346 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 80-266 |
| Cow position: | chr23:10853037-10852849 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 26, 128 |
| Conread position: | 91-266 |
| Cow position: | chr23:37992958-37992786 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 26 |
| Conread position: | 111-254 |
| Cow position: | chr23:222022-221880 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 128-266 |
| Cow position: | chr23:1546147-1546013 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 24 |
Show alignments to all cow chromosomes.