Cow genome map
| Conread name: | Pig4-TMW8010I17 |
| Conread position: | 1-238 |
| Cow position: | chr24:28990602-28990369 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 71, 11 |
| Conread position: | 1-266 |
| Cow position: | chr24:30313985-30314265 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 13 |
| Conread position: | 1-266 |
| Cow position: | chr24:37650715-37650441 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 14 |
| Conread position: | 2-163 |
| Cow position: | chr24:39791581-39791414 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 70, 12 |
| Conread position: | 9-229 |
| Cow position: | chr24:29180923-29180698 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 64, 27 |
| Conread position: | 11-266 |
| Cow position: | chr24:6150058-6149800 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 70, 191 |
| Conread position: | 13-134 |
| Cow position: | chr24:37823560-37823432 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-212 |
| Cow position: | chr24:19736301-19736502 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 142 |
| Conread position: | 13-214 |
| Cow position: | chr24:6912331-6912527 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 94 |
| Conread position: | 13-219 |
| Cow position: | chr24:19000080-18999866 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 56, 118 |
| Conread position: | 13-235 |
| Cow position: | chr24:30897503-30897735 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-238 |
| Cow position: | chr24:212020-211785 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-258 |
| Cow position: | chr24:39833482-39833737 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 13-259 |
| Cow position: | chr24:29539897-29540133 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 193 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 227, 20 |
| Conread position: | 13-262 |
| Cow position: | chr24:35675572-35675318 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 106 |
| Conread position: | 13-264 |
| Cow position: | chr24:24457217-24457474 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 59, 119 |
| Conread position: | 13-264 |
| Cow position: | chr24:28496549-28496814 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 59, 114 |
| Conread position: | 13-265 |
| Cow position: | chr24:17294165-17294415 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 13-266 |
| Cow position: | chr24:1269816-1269575 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 13-266 |
| Cow position: | chr24:2402335-2402606 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 13-266 |
| Cow position: | chr24:3430766-3430506 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 34 |
| Conread position: | 13-266 |
| Cow position: | chr24:5141975-5141711 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 13-266 |
| Cow position: | chr24:5754869-5754612 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 123 |
| Conread position: | 13-266 |
| Cow position: | chr24:11119310-11119053 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 60, 79 |
| Conread position: | 13-266 |
| Cow position: | chr24:15246610-15246864 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 207 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 60, 116 |
| Conread position: | 13-266 |
| Cow position: | chr24:17104537-17104795 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 59, 185 |
| Conread position: | 13-266 |
| Cow position: | chr24:18024941-18025201 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 70, 22 |
| Conread position: | 13-266 |
| Cow position: | chr24:19769522-19769269 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 59, 143 |
| Conread position: | 13-266 |
| Cow position: | chr24:20874715-20874447 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 13-266 |
| Cow position: | chr24:27608065-27608327 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 142 |
| Conread position: | 13-266 |
| Cow position: | chr24:27725979-27726233 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 59, 189 |
| Conread position: | 13-266 |
| Cow position: | chr24:28319176-28319429 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 59, 77 |
| Conread position: | 13-266 |
| Cow position: | chr24:29063626-29063875 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 13-266 |
| Cow position: | chr24:30229506-30229239 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 144 |
| Conread position: | 13-266 |
| Cow position: | chr24:31324318-31324051 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 13-266 |
| Cow position: | chr24:31816611-31816356 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 13-266 |
| Cow position: | chr24:33221907-33222169 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 63, 225 |
| Conread position: | 13-266 |
| Cow position: | chr24:39238804-39238569 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 223, 60 |
| Conread position: | 13-267 |
| Cow position: | chr24:27824495-27824234 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 60, 143 |
| Conread position: | 14-215 |
| Cow position: | chr24:18357020-18357230 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 58, 119 |
| Conread position: | 14-266 |
| Cow position: | chr24:24490985-24491240 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 58, 81 |
| Conread position: | 15-252 |
| Cow position: | chr24:15373436-15373194 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 57, 131 |
| Conread position: | 16-214 |
| Cow position: | chr24:37037930-37037723 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 55, 170 |
| Conread position: | 17-218 |
| Cow position: | chr24:17492327-17492135 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 72-266 |
| Cow position: | chr24:18771227-18771416 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 163, 14 |
| Conread position: | 91-263 |
| Cow position: | chr24:6160141-6160311 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 125 |
| Conread position: | 91-266 |
| Cow position: | chr24:34565070-34564897 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 77, 10 |
| Conread position: | 95-266 |
| Cow position: | chr24:18405377-18405537 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 89, 62 |
Show alignments to all cow chromosomes.