Cow genome map
| Conread name: | Pig4-TMW8010I17 |
| Conread position: | 1-266 |
| Cow position: | chr27:27613729-27613477 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 13-210 |
| Cow position: | chr27:29504750-29504543 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 168 |
| Conread position: | 13-236 |
| Cow position: | chr27:22547497-22547278 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 13-236 |
| Cow position: | chr27:30890190-30890417 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 13-237 |
| Cow position: | chr27:4835707-4835480 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 60, 120 |
| Conread position: | 13-237 |
| Cow position: | chr27:22735692-22735474 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 164, 81 |
| Conread position: | 13-238 |
| Cow position: | chr27:16589803-16589584 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 13-240 |
| Cow position: | chr27:435133-435366 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 60, 72 |
| Conread position: | 13-243 |
| Cow position: | chr27:20789480-20789241 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 62, 131 |
| Conread position: | 13-254 |
| Cow position: | chr27:16625799-16626043 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 13-259 |
| Cow position: | chr27:2930689-2930442 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 53, 73 |
| Conread position: | 13-260 |
| Cow position: | chr27:23890837-23891093 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 59, 203 |
| Conread position: | 13-261 |
| Cow position: | chr27:27460673-27460415 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 41, 48 |
| Conread position: | 13-264 |
| Cow position: | chr27:4672912-4673180 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 217 |
| Conread position: | 13-264 |
| Cow position: | chr27:4829913-4829648 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 33, 158 |
| Conread position: | 13-264 |
| Cow position: | chr27:19685814-19685555 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 206 |
| Conread position: | 13-265 |
| Cow position: | chr27:21669218-21668964 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 121 |
| Conread position: | 13-266 |
| Cow position: | chr27:815261-815526 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 13-266 |
| Cow position: | chr27:4812984-4812715 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-266 |
| Cow position: | chr27:7412292-7412544 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 59, 93 |
| Conread position: | 13-266 |
| Cow position: | chr27:14670483-14670219 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-266 |
| Cow position: | chr27:15454110-15454373 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 13-266 |
| Cow position: | chr27:15668872-15668605 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 67, 116 |
| Conread position: | 13-266 |
| Cow position: | chr27:15871060-15871319 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 59, 227 |
| Conread position: | 13-266 |
| Cow position: | chr27:16284374-16284634 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 59, 110 |
| Conread position: | 13-266 |
| Cow position: | chr27:19717814-19718085 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 59, 132 |
| Conread position: | 13-266 |
| Cow position: | chr27:20037217-20036967 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 13-266 |
| Cow position: | chr27:20553631-20553878 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 91 |
| Conread position: | 13-266 |
| Cow position: | chr27:20641436-20641185 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 60, 119 |
| Conread position: | 13-266 |
| Cow position: | chr27:20795692-20795945 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 13-266 |
| Cow position: | chr27:22035478-22035212 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 133 |
| Conread position: | 13-266 |
| Cow position: | chr27:22171199-22171460 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 23 |
| Conread position: | 13-266 |
| Cow position: | chr27:24014840-24014579 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 59, 118 |
| Conread position: | 13-267 |
| Cow position: | chr27:3796-4050 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 59, 51 |
| Conread position: | 13-282 |
| Cow position: | chr27:30359306-30359576 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 60, 170 |
| Conread position: | 14-165 |
| Cow position: | chr27:23560131-23559972 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 58, 144 |
| Conread position: | 14-212 |
| Cow position: | chr27:4858739-4858540 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 58, 89 |
| Conread position: | 14-212 |
| Cow position: | chr27:23594222-23594422 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 58, 10 |
| Conread position: | 14-265 |
| Cow position: | chr27:22220454-22220714 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 67, 172 |
| Conread position: | 14-266 |
| Cow position: | chr27:15409136-15408882 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 61, 126 |
| Conread position: | 15-153 |
| Cow position: | chr27:20628970-20629109 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 15-220 |
| Cow position: | chr27:21213689-21213885 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 131, 52 |
| Conread position: | 15-266 |
| Cow position: | chr27:27856234-27856495 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 57, 111 |
| Conread position: | 27-266 |
| Cow position: | chr27:20828797-20828546 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 45, 132 |
| Conread position: | 32-207 |
| Cow position: | chr27:20481447-20481276 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 148 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 42, 64 |
| Conread position: | 32-238 |
| Cow position: | chr27:3306693-3306902 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 69, 11 |
| Conread position: | 37-263 |
| Cow position: | chr27:21978212-21977979 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 33, 197 |
| Conread position: | 45-265 |
| Cow position: | chr27:27449503-27449274 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 63-265 |
| Cow position: | chr27:16513925-16513721 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 32, 64 |
| Conread position: | 70-266 |
| Cow position: | chr27:27641037-27640830 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 72-238 |
| Cow position: | chr27:21408596-21408424 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 91-266 |
| Cow position: | chr27:24446169-24445995 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 137, 10 |
| Conread position: | 95-266 |
| Cow position: | chr27:2592537-2592703 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 87, 113 |
| Conread position: | 147-265 |
| Cow position: | chr27:4719852-4719733 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 92, 21 |
Show alignments to all cow chromosomes.