Cow genome map
| Conread name: | Pig4-TMW8010I17 |
| Conread position: | 1-266 |
| Cow position: | chr28:11426471-11426745 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 11-266 |
| Cow position: | chr28:10172352-10172613 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 159 |
| Conread position: | 12-266 |
| Cow position: | chr28:8787603-8787347 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 196 |
| Conread position: | 12-266 |
| Cow position: | chr28:12947012-12946738 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 49, 123 |
| Conread position: | 13-134 |
| Cow position: | chr28:4013146-4013020 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 13-150 |
| Cow position: | chr28:7350716-7350575 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-170 |
| Cow position: | chr28:4182063-4181900 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 13-181 |
| Cow position: | chr28:5577591-5577412 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 13-189 |
| Cow position: | chr28:11079363-11079185 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 87, 19 |
| Conread position: | 13-205 |
| Cow position: | chr28:7008916-7009112 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 59, 154 |
| Conread position: | 13-222 |
| Cow position: | chr28:24082332-24082116 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 13-224 |
| Cow position: | chr28:25806635-25806415 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-237 |
| Cow position: | chr28:4016593-4016368 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 59, 135 |
| Conread position: | 13-237 |
| Cow position: | chr28:33884464-33884242 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 59, 119 |
| Conread position: | 13-238 |
| Cow position: | chr28:2131862-2132089 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 122 |
| Conread position: | 13-254 |
| Cow position: | chr28:26614935-26614699 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 13-256 |
| Cow position: | chr28:15043800-15044048 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 13-259 |
| Cow position: | chr28:4834782-4835038 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 122 |
| Conread position: | 13-263 |
| Cow position: | chr28:7548996-7549259 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 180 |
| Conread position: | 13-264 |
| Cow position: | chr28:2862930-2862664 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 109 |
| Conread position: | 13-264 |
| Cow position: | chr28:4809841-4809596 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 13-264 |
| Cow position: | chr28:5204257-5204002 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 59, 190 |
| Conread position: | 13-265 |
| Cow position: | chr28:5684765-5684511 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 113 |
| Conread position: | 13-265 |
| Cow position: | chr28:16370021-16370273 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 118 |
| Conread position: | 13-265 |
| Cow position: | chr28:26533605-26533344 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 56, 95 |
| Conread position: | 13-266 |
| Cow position: | chr28:3408156-3408417 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 13-266 |
| Cow position: | chr28:3914779-3914510 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 13-266 |
| Cow position: | chr28:4588159-4587897 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 17 |
| Conread position: | 13-266 |
| Cow position: | chr28:5437023-5437291 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 13-266 |
| Cow position: | chr28:6971286-6971539 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 56, 145 |
| Conread position: | 13-266 |
| Cow position: | chr28:9426288-9426541 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 152 |
| Conread position: | 13-266 |
| Cow position: | chr28:9740528-9740272 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 126 |
| Conread position: | 13-266 |
| Cow position: | chr28:10533873-10534130 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 79, 57 |
| Conread position: | 13-266 |
| Cow position: | chr28:11527197-11527455 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 59, 15 |
| Conread position: | 13-266 |
| Cow position: | chr28:11585140-11585407 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 222 |
| Conread position: | 13-266 |
| Cow position: | chr28:11752077-11752344 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 140 |
| Conread position: | 13-266 |
| Cow position: | chr28:11884459-11884722 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 13-266 |
| Cow position: | chr28:12430667-12430410 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 13-266 |
| Cow position: | chr28:13474362-13474106 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 192 |
| Conread position: | 13-266 |
| Cow position: | chr28:16204272-16204532 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-266 |
| Cow position: | chr28:16346470-16346726 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 13-266 |
| Cow position: | chr28:16919107-16919361 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 13-266 |
| Cow position: | chr28:19222089-19222345 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 90, 124 |
| Conread position: | 13-266 |
| Cow position: | chr28:21845019-21844756 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 135 |
| Conread position: | 13-266 |
| Cow position: | chr28:21868519-21868252 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-266 |
| Cow position: | chr28:22332590-22332349 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 80, 67 |
| Conread position: | 13-266 |
| Cow position: | chr28:23007668-23007925 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 59, 220 |
| Conread position: | 13-266 |
| Cow position: | chr28:23676200-23675944 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 122 |
| Conread position: | 13-266 |
| Cow position: | chr28:25057028-25056773 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 123 |
| Conread position: | 13-266 |
| Cow position: | chr28:25071181-25070917 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 13-266 |
| Cow position: | chr28:26220320-26220062 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 68, 206 |
| Conread position: | 13-266 |
| Cow position: | chr28:26719405-26719160 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 13-266 |
| Cow position: | chr28:26922306-26922564 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 59, 179 |
| Conread position: | 13-266 |
| Cow position: | chr28:34133923-34133664 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 61, 41 |
| Conread position: | 13-270 |
| Cow position: | chr28:4159017-4158747 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 59, 123 |
| Conread position: | 14-254 |
| Cow position: | chr28:9636396-9636644 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 140 |
| Conread position: | 14-266 |
| Cow position: | chr28:5128668-5128929 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 136 |
| Conread position: | 15-266 |
| Cow position: | chr28:3023853-3024111 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 57, 136 |
| Conread position: | 15-266 |
| Cow position: | chr28:3256858-3256594 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 16-254 |
| Cow position: | chr28:24966445-24966205 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 17-266 |
| Cow position: | chr28:22346079-22345819 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 123 |
| Conread position: | 27-266 |
| Cow position: | chr28:5904780-5904536 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 54 |
| Conread position: | 33-266 |
| Cow position: | chr28:25596673-25596433 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 39, 127 |
| Conread position: | 53-264 |
| Cow position: | chr28:4090032-4090242 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 24, 155 |
| Conread position: | 53-266 |
| Cow position: | chr28:19222580-19222797 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 20, 67 |
| Conread position: | 57-266 |
| Cow position: | chr28:3751332-3751119 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 62-266 |
| Cow position: | chr28:5805522-5805325 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 41 |
| Conread position: | 67-264 |
| Cow position: | chr28:2905582-2905383 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 164 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 31, 83 |
| Conread position: | 68-266 |
| Cow position: | chr28:5658550-5658354 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 95-266 |
| Cow position: | chr28:4880295-4880463 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 141, 33 |
| Conread position: | 112-266 |
| Cow position: | chr28:25498550-25498703 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 128, 28 |
| Conread position: | 133-266 |
| Cow position: | chr28:2888366-2888230 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 110 |
| Conread position: | 145-261 |
| Cow position: | chr28:16450780-16450894 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 65 |
Show alignments to all cow chromosomes.