Cow genome map
| Conread name: | Pig4-TMW8010I17 |
| Conread position: | 1-266 |
| Cow position: | chr29:1556994-1556726 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 13 |
| Conread position: | 11-266 |
| Cow position: | chr29:29975095-29974835 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 159 |
| Conread position: | 13-134 |
| Cow position: | chr29:29324368-29324487 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 23 |
| Conread position: | 13-164 |
| Cow position: | chr29:24578918-24578755 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-198 |
| Cow position: | chr29:31943921-31943743 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 59, 95 |
| Conread position: | 13-199 |
| Cow position: | chr29:27329948-27329754 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 13-225 |
| Cow position: | chr29:34745603-34745826 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 13-226 |
| Cow position: | chr29:31674688-31674465 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 59, 127 |
| Conread position: | 13-238 |
| Cow position: | chr29:5186438-5186672 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 135 |
| Conread position: | 13-238 |
| Cow position: | chr29:27588978-27588747 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 79, 124 |
| Conread position: | 13-238 |
| Cow position: | chr29:29588871-29589087 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 82 |
| Conread position: | 13-238 |
| Cow position: | chr29:39329548-39329771 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 59, 95 |
| Conread position: | 13-239 |
| Cow position: | chr29:43328699-43328464 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 56, 100 |
| Conread position: | 13-240 |
| Cow position: | chr29:44682049-44682276 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 59, 91 |
| Conread position: | 13-262 |
| Cow position: | chr29:8926406-8926661 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 59, 130 |
| Conread position: | 13-262 |
| Cow position: | chr29:26672856-26673108 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 189 |
| Conread position: | 13-263 |
| Cow position: | chr29:40166299-40166039 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 59, 120 |
| Conread position: | 13-264 |
| Cow position: | chr29:20626622-20626372 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 57, 84 |
| Conread position: | 13-264 |
| Cow position: | chr29:22162194-22162455 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 230 |
| Conread position: | 13-264 |
| Cow position: | chr29:36530922-36530659 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 123 |
| Conread position: | 13-265 |
| Cow position: | chr29:2071516-2071774 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 190 |
| Conread position: | 13-265 |
| Cow position: | chr29:29769296-29769551 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 20 |
| Conread position: | 13-265 |
| Cow position: | chr29:45005574-45005824 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 60, 44 |
| Conread position: | 13-266 |
| Cow position: | chr29:1229662-1229402 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 90, 116 |
| Conread position: | 13-266 |
| Cow position: | chr29:4480118-4480382 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 43 |
| Conread position: | 13-266 |
| Cow position: | chr29:13615594-13615850 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 13-266 |
| Cow position: | chr29:17110012-17109765 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 13-266 |
| Cow position: | chr29:17607473-17607210 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 61, 142 |
| Conread position: | 13-266 |
| Cow position: | chr29:25737359-25737622 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 219 |
| Conread position: | 13-266 |
| Cow position: | chr29:26615665-26615931 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 218 |
| Conread position: | 13-266 |
| Cow position: | chr29:34773682-34773934 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 224 |
| Conread position: | 13-266 |
| Cow position: | chr29:41530905-41530643 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 59, 172 |
| Conread position: | 13-267 |
| Cow position: | chr29:40117627-40117361 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 59, 183 |
| Conread position: | 13-276 |
| Cow position: | chr29:41365164-41364893 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 13-282 |
| Cow position: | chr29:22613485-22613205 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 15-264 |
| Cow position: | chr29:39111258-39111512 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 57, 215 |
| Conread position: | 15-266 |
| Cow position: | chr29:12680209-12679948 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 16-265 |
| Cow position: | chr29:5063197-5062926 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 24-266 |
| Cow position: | chr29:42849269-42849021 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 215 |
| Conread position: | 27-265 |
| Cow position: | chr29:36210187-36209959 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 45, 71 |
| Conread position: | 33-266 |
| Cow position: | chr29:10456527-10456759 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 39, 180 |
| Conread position: | 34-266 |
| Cow position: | chr29:28446215-28446466 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 40-266 |
| Cow position: | chr29:39643204-39642970 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 33, 96 |
| Conread position: | 47-266 |
| Cow position: | chr29:9685986-9686207 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 65-238 |
| Cow position: | chr29:21000636-21000466 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 145 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 8, 31 |
| Conread position: | 87-266 |
| Cow position: | chr29:32799734-32799909 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 95, 144 |
| Conread position: | 162-266 |
| Cow position: | chr29:21665869-21665764 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
Show alignments to all cow chromosomes.