Cow genome map

Conread name: Pig4-TMW8010I17

Conread position: 1-234
Cow position: chr3:74079596-74079834 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 13

Conread position: 1-266
Cow position: chr3:9641609-9641336 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 14

Conread position: 1-266
Cow position: chr3:26066041-26065773 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 11

Conread position: 1-266
Cow position: chr3:59799289-59799026 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 76, 13

Conread position: 1-267
Cow position: chr3:32585191-32584929 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 71, 10

Conread position: 1-296
Cow position: chr3:15752595-15752888 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 13, 32

Conread position: 7-185
Cow position: chr3:3883775-3883965 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 11-202
Cow position: chr3:59035075-59034870 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 11-266
Cow position: chr3:7337747-7338002 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 61, 80

Conread position: 12-254
Cow position: chr3:15159065-15158825 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 60, 83

Conread position: 12-266
Cow position: chr3:26219017-26219290 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 157

Conread position: 13-141
Cow position: chr3:19626473-19626612 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 13-141
Cow position: chr3:44960972-44961092 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 54

Conread position: 13-144
Cow position: chr3:3316783-3316918 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 11

Conread position: 13-146
Cow position: chr3:9117059-9116920 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 64, 28

Conread position: 13-179
Cow position: chr3:78093356-78093524 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 59, 0

Conread position: 13-195
Cow position: chr3:32183985-32184177 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 13-199
Cow position: chr3:53508644-53508461 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 63, 116

Conread position: 13-204
Cow position: chr3:48072849-48073039 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 63, 148

Conread position: 13-205
Cow position: chr3:73915774-73915970 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 82, 23

Conread position: 13-207
Cow position: chr3:48810612-48810805 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 103

Conread position: 13-208
Cow position: chr3:60264683-60264884 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 59, 136

Conread position: 13-214
Cow position: chr3:19585896-19585687 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 63, 19

Conread position: 13-218
Cow position: chr3:75107807-75107615 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 83

Conread position: 13-223
Cow position: chr3:54506740-54506525 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 146

Conread position: 13-223
Cow position: chr3:79092359-79092579 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 13-224
Cow position: chr3:20677809-20678020 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 23

Conread position: 13-229
Cow position: chr3:68156756-68156551 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 171
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 8, 82

Conread position: 13-230
Cow position: chr3:23408325-23408542 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 23

Conread position: 13-233
Cow position: chr3:37186860-37186639 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 154

Conread position: 13-235
Cow position: chr3:80072162-80071928 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 184
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 59, 0

Conread position: 13-238
Cow position: chr3:10896855-10896633 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 85

Conread position: 13-238
Cow position: chr3:53790504-53790736 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 24

Conread position: 13-238
Cow position: chr3:68881088-68881311 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 34

Conread position: 13-261
Cow position: chr3:70565705-70565961 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 13-262
Cow position: chr3:74754358-74754105 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 76, 146

Conread position: 13-263
Cow position: chr3:26553682-26553937 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 55, 82

Conread position: 13-263
Cow position: chr3:30180119-30179858 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 209

Conread position: 13-264
Cow position: chr3:13353394-13353131 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 23

Conread position: 13-264
Cow position: chr3:31046919-31047175 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 19

Conread position: 13-264
Cow position: chr3:79591858-79592115 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 61, 82

Conread position: 13-265
Cow position: chr3:5097240-5096977 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 60, 219

Conread position: 13-265
Cow position: chr3:45881931-45881682 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 137

Conread position: 13-266
Cow position: chr3:4461451-4461717 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 62, 125

Conread position: 13-266
Cow position: chr3:7331093-7331345 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 19

Conread position: 13-266
Cow position: chr3:8061159-8060904 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 60, 23

Conread position: 13-266
Cow position: chr3:10958207-10958457 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 62, 188

Conread position: 13-266
Cow position: chr3:20437623-20437874 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 134

Conread position: 13-266
Cow position: chr3:31419725-31419473 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 56, 83

Conread position: 13-266
Cow position: chr3:44932549-44932280 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 13-266
Cow position: chr3:49327977-49327709 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 13-266
Cow position: chr3:50768712-50768450 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 13-266
Cow position: chr3:51234063-51234324 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 63, 40

Conread position: 13-266
Cow position: chr3:53150364-53150099 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 13-266
Cow position: chr3:53270863-53270598 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 13-266
Cow position: chr3:53572719-53572978 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 56, 153

Conread position: 13-266
Cow position: chr3:55189720-55189979 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 163

Conread position: 13-266
Cow position: chr3:55272012-55272271 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 58, 187

Conread position: 13-266
Cow position: chr3:56059844-56059579 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 13-266
Cow position: chr3:59474155-59473884 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 59, 133

Conread position: 13-266
Cow position: chr3:59610685-59610952 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 59, 114

Conread position: 13-266
Cow position: chr3:61224711-61224963 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 120

Conread position: 13-266
Cow position: chr3:67704579-67704312 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 60, 213

Conread position: 13-266
Cow position: chr3:69750678-69750928 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 5

Conread position: 13-266
Cow position: chr3:73461000-73460750 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 137

Conread position: 13-266
Cow position: chr3:73709080-73708821 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 60, 138

Conread position: 13-266
Cow position: chr3:74234219-74233967 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 138

Conread position: 13-266
Cow position: chr3:75080796-75080538 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 132

Conread position: 13-266
Cow position: chr3:75570419-75570670 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 119

Conread position: 13-266
Cow position: chr3:78077218-78076961 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 132

Conread position: 13-266
Cow position: chr3:80564999-80564732 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 13-266
Cow position: chr3:80818750-80818500 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 81

Conread position: 13-266
Cow position: chr3:81371682-81371428 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 152

Conread position: 13-266
Cow position: chr3:82019806-82020072 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 146

Conread position: 13-266
Cow position: chr3:83455118-83455380 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 82, 57

Conread position: 13-266
Cow position: chr3:83815754-83816021 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 59, 184

Conread position: 13-267
Cow position: chr3:17222109-17222373 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 126

Conread position: 13-267
Cow position: chr3:54946164-54945895 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 13-285
Cow position: chr3:78092478-78092757 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 118

Conread position: 13-301
Cow position: chr3:15506481-15506182 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 13

Conread position: 14-143
Cow position: chr3:75907410-75907276 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 15

Conread position: 14-180
Cow position: chr3:73237228-73237053 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 139

Conread position: 15-190
Cow position: chr3:62789144-62789331 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 15-191
Cow position: chr3:55177715-55177905 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 15-267
Cow position: chr3:74533380-74533119 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 57, 130

Conread position: 16-266
Cow position: chr3:52608212-52607955 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 118

Conread position: 16-266
Cow position: chr3:58968873-58969124 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 104

Conread position: 24-179
Cow position: chr3:18426685-18426840 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 78

Conread position: 28-264
Cow position: chr3:5850911-5851154 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 118

Conread position: 28-266
Cow position: chr3:45524285-45524036 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 212

Conread position: 32-238
Cow position: chr3:70609646-70609427 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 123

Conread position: 33-227
Cow position: chr3:56523429-56523616 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 39, 77

Conread position: 33-266
Cow position: chr3:15057606-15057826 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 188
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 22

Conread position: 33-266
Cow position: chr3:75480016-75479784 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 113

Conread position: 39-149
Cow position: chr3:28496831-28496717 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 42-266
Cow position: chr3:21302445-21302658 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 41, 54

Conread position: 58-266
Cow position: chr3:11026905-11026698 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 11

Conread position: 90-218
Cow position: chr3:59271489-59271362 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 91-266
Cow position: chr3:17952605-17952428 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 143

Conread position: 91-266
Cow position: chr3:56582785-56582615 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 90, 46

Conread position: 121-266
Cow position: chr3:4861605-4861461 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 125
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 114, 24

Conread position: 122-266
Cow position: chr3:72330-72187 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 154-259
Cow position: chr3:45221816-45221921 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 93
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 158-266
Cow position: chr3:8901300-8901192 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.