Cow genome map

Conread name: Pig4-TMW8010I17

Conread position: 1-150
Cow position: chr6:37466199-37466054 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 89

Conread position: 1-191
Cow position: chr6:37332215-37332018 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 69, 14

Conread position: 1-205
Cow position: chr6:60273904-60274109 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 71, 11

Conread position: 9-219
Cow position: chr6:11192364-11192583 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 173
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 9

Conread position: 11-238
Cow position: chr6:67045051-67044823 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 72

Conread position: 11-266
Cow position: chr6:21456584-21456855 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 206

Conread position: 12-125
Cow position: chr6:30023983-30023870 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 60, 94

Conread position: 12-238
Cow position: chr6:24468298-24468529 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 71

Conread position: 13-150
Cow position: chr6:31078771-31078920 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 13-166
Cow position: chr6:60468335-60468173 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 13-166
Cow position: chr6:67615333-67615495 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 13-169
Cow position: chr6:7170251-7170414 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 13-176
Cow position: chr6:17068551-17068723 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 13-181
Cow position: chr6:23465937-23466108 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 15

Conread position: 13-198
Cow position: chr6:66375236-66375426 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 59, 0

Conread position: 13-212
Cow position: chr6:59603111-59603317 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 60, 161

Conread position: 13-215
Cow position: chr6:22985758-22985972 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 13-218
Cow position: chr6:58597409-58597620 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 59, 123

Conread position: 13-223
Cow position: chr6:16261875-16261665 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 82, 51

Conread position: 13-231
Cow position: chr6:17245516-17245739 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 51

Conread position: 13-237
Cow position: chr6:1770101-1770330 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 154

Conread position: 13-238
Cow position: chr6:1499740-1499506 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 203

Conread position: 13-238
Cow position: chr6:61608609-61608375 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 13-249
Cow position: chr6:46282907-46283146 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 59, 121

Conread position: 13-249
Cow position: chr6:54036046-54036283 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 82, 148

Conread position: 13-253
Cow position: chr6:53024707-53024946 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 126

Conread position: 13-259
Cow position: chr6:19264402-19264658 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 217

Conread position: 13-259
Cow position: chr6:58590370-58590116 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 63, 121

Conread position: 13-263
Cow position: chr6:24031473-24031213 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 19

Conread position: 13-264
Cow position: chr6:15243352-15243088 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 59, 145

Conread position: 13-264
Cow position: chr6:21231621-21231373 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 60, 142

Conread position: 13-264
Cow position: chr6:24004633-24004384 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 59, 118

Conread position: 13-264
Cow position: chr6:32122004-32121748 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 123

Conread position: 13-264
Cow position: chr6:36202915-36202665 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 60, 16

Conread position: 13-264
Cow position: chr6:59109042-59108779 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 60, 0

Conread position: 13-264
Cow position: chr6:66131403-66131145 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 34

Conread position: 13-265
Cow position: chr6:20330105-20329857 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 59, 85

Conread position: 13-265
Cow position: chr6:28976943-28977193 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 59, 146

Conread position: 13-266
Cow position: chr6:1886570-1886828 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 60, 35

Conread position: 13-266
Cow position: chr6:4383576-4383327 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 205

Conread position: 13-266
Cow position: chr6:7190022-7190284 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 59, 188

Conread position: 13-266
Cow position: chr6:10105882-10106161 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 13-266
Cow position: chr6:13040537-13040288 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 83

Conread position: 13-266
Cow position: chr6:13687715-13687976 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 120

Conread position: 13-266
Cow position: chr6:18447421-18447674 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 20

Conread position: 13-266
Cow position: chr6:19695903-19695641 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 60, 34

Conread position: 13-266
Cow position: chr6:20097862-20098129 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 13-266
Cow position: chr6:21869552-21869810 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 53, 134

Conread position: 13-266
Cow position: chr6:26728435-26728692 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 123

Conread position: 13-266
Cow position: chr6:35842755-35842492 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 82, 224

Conread position: 13-266
Cow position: chr6:38207393-38207661 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 59, 112

Conread position: 13-266
Cow position: chr6:44194452-44194710 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 59, 108

Conread position: 13-266
Cow position: chr6:45690513-45690758 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 64, 91

Conread position: 13-266
Cow position: chr6:46465918-46465663 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 196
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 62, 193

Conread position: 13-266
Cow position: chr6:46571202-46570953 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 82

Conread position: 13-266
Cow position: chr6:47520150-47519881 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 64, 0

Conread position: 13-266
Cow position: chr6:47575003-47574740 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 13-266
Cow position: chr6:49398523-49398781 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 13-266
Cow position: chr6:51581158-51581422 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 27

Conread position: 13-266
Cow position: chr6:53652137-53651876 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 82

Conread position: 13-266
Cow position: chr6:60350195-60350464 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 13-266
Cow position: chr6:65702316-65702566 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 82

Conread position: 13-267
Cow position: chr6:8966194-8965923 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 173

Conread position: 13-267
Cow position: chr6:51835496-51835234 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 57

Conread position: 13-292
Cow position: chr6:48112293-48112016 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 33

Conread position: 14-214
Cow position: chr6:61524109-61524310 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 118

Conread position: 14-284
Cow position: chr6:899197-899473 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 15-230
Cow position: chr6:61168850-61168647 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 57, 81

Conread position: 15-238
Cow position: chr6:57571574-57571341 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 15-238
Cow position: chr6:60118245-60118014 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 216

Conread position: 15-266
Cow position: chr6:12338088-12337819 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 15-266
Cow position: chr6:52478316-52478592 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 15-266
Cow position: chr6:54990906-54991167 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 187

Conread position: 15-286
Cow position: chr6:47640337-47640623 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 16-224
Cow position: chr6:50976142-50975936 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 120

Conread position: 17-238
Cow position: chr6:55282201-55282422 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 179

Conread position: 18-266
Cow position: chr6:54132907-54132653 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 143

Conread position: 23-254
Cow position: chr6:19446339-19446107 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 14

Conread position: 27-234
Cow position: chr6:12829142-12829354 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 45, 99

Conread position: 28-228
Cow position: chr6:37376432-37376643 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 32-266
Cow position: chr6:21542401-21542155 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 190
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 41, 0

Conread position: 32-266
Cow position: chr6:29485160-29484925 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 98

Conread position: 36-266
Cow position: chr6:60239320-60239557 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 8, 88

Conread position: 37-263
Cow position: chr6:18961442-18961685 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 0

Conread position: 38-266
Cow position: chr6:49410625-49410854 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 58

Conread position: 42-264
Cow position: chr6:32210572-32210790 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 6

Conread position: 50-263
Cow position: chr6:34031721-34031506 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 23, 92

Conread position: 50-266
Cow position: chr6:12623518-12623303 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 31, 80

Conread position: 93-266
Cow position: chr6:2013028-2012854 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 142, 0

Conread position: 95-266
Cow position: chr6:22877151-22877325 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 56, 64

Conread position: 108-266
Cow position: chr6:40138722-40138870 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Show alignments to all cow chromosomes.