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Cow genome map

           
Conread name:
           
Pig4-TMW8013E01
        

               
Conread position:
               
1-182
               

               
Cow position:
               
chr18:1144697-1144515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr18:10097674-10097865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr18:4369498-4369322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
172, 51
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr18:36649238-36649438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 92
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr18:16462792-16462587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr18:33523095-33523306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr18:53829643-53829425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
85, 201
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr18:10292591-10292813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr18:28925596-28925374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 30
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr18:54274776-54275036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
58, 88
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr18:6878111-6877849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
71, 95
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr18:23659043-23658758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:16082349-16082640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 151
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr18:4556870-4556563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr18:52899583-52899910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 224
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr18:37691080-37690758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 85
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr18:1800814-1800467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
85, 123
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr18:27529880-27530241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
85, 222
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr18:37153571-37153219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
85, 180
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr18:8967520-8967888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 85
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr18:602603-602195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr18:8624468-8624060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr18:24548006-24547595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
85, 225
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr18:32860159-32860565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr18:36224297-36224695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
71, 211
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr18:35057863-35058271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 90
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr18:50082713-50082318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr18:55768664-55768234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr18:1859707-1859283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 94
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr18:32218737-32218316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 96
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr18:41238388-41238809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
71, 211
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr18:45979220-45979637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
71, 221
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr18:49543006-49543417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 85
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr18:13173010-13172575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 389
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr18:22275526-22275076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr18:29862746-29862293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 220
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr18:4315821-4316279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 41
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr18:43563739-43564203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 91
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr18:56151138-56150660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 121
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr18:52632905-52632418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr18:56165513-56165974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 106
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr18:601654-601183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr18:10655973-10656431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 66
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr18:30186402-30185900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 233
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr18:33502856-33502389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 99
               

               
Conread position:
               
1-481
               

               
Cow position:
               
chr18:14815825-14815344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 230
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr18:2270987-2270500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 221
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr18:19356386-19356872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
85, 248
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr18:40141373-40140888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
88, 100
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr18:43473449-43473926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
88, 61
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr18:51666067-51666547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
85, 144
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr18:7955663-7956147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 222
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr18:7964747-7965231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 97
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr18:11866865-11867336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr18:19645691-19646174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 224
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr18:35012789-35012318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 97
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr18:40758728-40759206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 87
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr18:42966354-42966864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-490
               

               
Cow position:
               
chr18:27102838-27103331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
85, 162
               

               
Conread position:
               
2-172
               

               
Cow position:
               
chr18:44484535-44484364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
2-180
               

               
Cow position:
               
chr18:36233014-36232835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr18:41072377-41072674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr18:51191235-51190947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr18:16378487-16378790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 224
               

               
Conread position:
               
2-330
               

               
Cow position:
               
chr18:23631061-23630726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
2-333
               

               
Cow position:
               
chr18:24293369-24293703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 93
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr18:9355750-9355411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 118
               

               
Conread position:
               
2-372
               

               
Cow position:
               
chr18:22790550-22790181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 91
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr18:55782909-55782508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr18:6829547-6829179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
2-412
               

               
Cow position:
               
chr18:13293026-13293443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr18:7649509-7649932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr18:28101143-28101610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
2-473
               

               
Cow position:
               
chr18:47314781-47314291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 86
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr18:20125825-20126297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 83
               

               
Conread position:
               
2-475
               

               
Cow position:
               
chr18:51756616-51757085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 140
               

               
Conread position:
               
2-478
               

               
Cow position:
               
chr18:30793977-30794423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
2-480
               

               
Cow position:
               
chr18:4672860-4673304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
2-483
               

               
Cow position:
               
chr18:51211684-51212183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 50
               

               
Conread position:
               
2-483
               

               
Cow position:
               
chr18:51691957-51691463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr18:29759236-29759451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
62, 176
               

               
Conread position:
               
3-373
               

               
Cow position:
               
chr18:50637944-50637566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 86
               

               
Conread position:
               
3-478
               

               
Cow position:
               
chr18:43284231-43283762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
3-483
               

               
Cow position:
               
chr18:9974807-9974329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 84
               

               
Conread position:
               
4-146
               

               
Cow position:
               
chr18:27457235-27457094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 83
               

               
Conread position:
               
4-163
               

               
Cow position:
               
chr18:9365409-9365569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-167
               

               
Cow position:
               
chr18:39875772-39875606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
61, 94
               

               
Conread position:
               
4-170
               

               
Cow position:
               
chr18:26355538-26355374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr18:23137697-23137521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 89
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr18:25206778-25206607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
61, 90
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr18:33157309-33157474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr18:33158388-33158582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 48
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr18:48392349-48392544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 101
               

               
Conread position:
               
4-192
               

               
Cow position:
               
chr18:10112521-10112713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
58, 102
               

               
Conread position:
               
4-192
               

               
Cow position:
               
chr18:11680209-11680401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 56
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr18:31563079-31562878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
57, 92
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr18:1955005-1954805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr18:268530-268332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
68, 83
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chr18:12123417-12123215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr18:42249664-42249456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
59, 116
               

               
Conread position:
               
4-226
               

               
Cow position:
               
chr18:52854370-52854599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 99
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr18:30876412-30876163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
4-258
               

               
Cow position:
               
chr18:13877216-13876953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 89
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr18:48451193-48451453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
61, 223
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr18:50789586-50789846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
55, 88
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr18:16050566-16050279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
68, 81
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr18:12585621-12585325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 218
               

               
Conread position:
               
4-327
               

               
Cow position:
               
chr18:27800013-27799685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
68, 90
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr18:21609298-21608954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
73, 101
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr18:51239761-51240091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 105
               

               
Conread position:
               
4-335
               

               
Cow position:
               
chr18:19199704-19200046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 189
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr18:7076289-7076633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 60
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr18:11262482-11262822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-365
               

               
Cow position:
               
chr18:35752131-35751779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 82
               

               
Conread position:
               
4-372
               

               
Cow position:
               
chr18:1733648-1733301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
321, 55
               

               
Conread position:
               
4-377
               

               
Cow position:
               
chr18:9712563-9712949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 133
               

               
Conread position:
               
4-387
               

               
Cow position:
               
chr18:33274813-33275219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
57, 83
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr18:3179939-3180336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 82
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr18:35364251-35363847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr18:40253135-40252730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
82, 221
               

               
Conread position:
               
4-405
               

               
Cow position:
               
chr18:17334881-17334487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
4-411
               

               
Cow position:
               
chr18:36907655-36907228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
81, 375
               

               
Conread position:
               
4-413
               

               
Cow position:
               
chr18:11190931-11191362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 185
               

               
Conread position:
               
4-419
               

               
Cow position:
               
chr18:17324239-17324653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 56
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr18:3098793-3098371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
4-430
               

               
Cow position:
               
chr18:25003363-25002931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
4-438
               

               
Cow position:
               
chr18:11368265-11367802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 94
               

               
Conread position:
               
4-444
               

               
Cow position:
               
chr18:19159443-19159012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
4-446
               

               
Cow position:
               
chr18:38090066-38089602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
4-456
               

               
Cow position:
               
chr18:26938505-26938955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
4-456
               

               
Cow position:
               
chr18:29058962-29058522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 55
               

               
Conread position:
               
4-457
               

               
Cow position:
               
chr18:12118325-12117875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 46
               

               
Conread position:
               
4-465
               

               
Cow position:
               
chr18:21251514-21251963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 68
               

               
Conread position:
               
4-470
               

               
Cow position:
               
chr18:19850226-19849767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 84
               

               
Conread position:
               
4-472
               

               
Cow position:
               
chr18:29648308-29648772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 83
               

               
Conread position:
               
4-474
               

               
Cow position:
               
chr18:24021910-24022378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 87
               

               
Conread position:
               
4-477
               

               
Cow position:
               
chr18:37024037-37023558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 84
               

               
Conread position:
               
4-479
               

               
Cow position:
               
chr18:18919419-18918963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 83
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr18:51500571-51500077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 165
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr18:4540353-4539884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr18:11376884-11377363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 89
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr18:22181587-22181105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
82, 221
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr18:26883588-26884071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 221
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr18:29072282-29072765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 245
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr18:1494809-1495303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 33
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr18:4182681-4182188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 150
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr18:14048241-14048708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 79
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr18:19193827-19193366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 195
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr18:20641959-20641497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 81
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr18:28658389-28657912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr18:29768427-29768920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr18:31672988-31672513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 89
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr18:33299428-33299903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 69
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr18:37002154-37002631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 84
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr18:51406372-51405907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr18:55692330-55692815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 232
               

               
Conread position:
               
4-485
               

               
Cow position:
               
chr18:36912181-36911685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
81, 375
               

               
Conread position:
               
4-486
               

               
Cow position:
               
chr18:40203276-40202801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
47, 87
               

               
Conread position:
               
4-494
               

               
Cow position:
               
chr18:10861892-10861419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 82
               

               
Conread position:
               
4-496
               

               
Cow position:
               
chr18:55139275-55138793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
45, 85
               

               
Conread position:
               
4-500
               

               
Cow position:
               
chr18:42747101-42747609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
5-216
               

               
Cow position:
               
chr18:19761025-19761241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
46, 62
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr18:4496660-4496408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
67, 82
               

               
Conread position:
               
5-352
               

               
Cow position:
               
chr18:32908417-32908766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 141
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr18:35295081-35295447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 219
               

               
Conread position:
               
5-403
               

               
Cow position:
               
chr18:39709410-39709812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 220
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr18:33756411-33756820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 142
               

               
Conread position:
               
5-457
               

               
Cow position:
               
chr18:35075915-35076366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 11
               

               
Conread position:
               
5-461
               

               
Cow position:
               
chr18:33793218-33793681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 287
               

               
Conread position:
               
5-482
               

               
Cow position:
               
chr18:19320498-19320979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
46, 68
               

               
Conread position:
               
5-483
               

               
Cow position:
               
chr18:52635561-52635071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 217
               

               
Conread position:
               
5-483
               

               
Cow position:
               
chr18:55589954-55589486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 83
               

               
Conread position:
               
6-355
               

               
Cow position:
               
chr18:28539866-28539513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
66, 220
               

               
Conread position:
               
6-474
               

               
Cow position:
               
chr18:33606152-33606621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 81
               

               
Conread position:
               
6-474
               

               
Cow position:
               
chr18:44262136-44262621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 81
               

               
Conread position:
               
6-483
               

               
Cow position:
               
chr18:39002280-39001804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 87
               

               
Conread position:
               
6-484
               

               
Cow position:
               
chr18:36458449-36458934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 88
               

               
Conread position:
               
7-401
               

               
Cow position:
               
chr18:52457525-52457140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
65, 112
               

               
Conread position:
               
8-402
               

               
Cow position:
               
chr18:22874388-22874796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
8-413
               

               
Cow position:
               
chr18:49655234-49655633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 84
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr18:4152983-4152667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
56, 90
               

               
Conread position:
               
9-483
               

               
Cow position:
               
chr18:16418168-16417707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
10-192
               

               
Cow position:
               
chr18:10890775-10890962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 85
               

               
Conread position:
               
10-480
               

               
Cow position:
               
chr18:9089231-9089696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
11-326
               

               
Cow position:
               
chr18:9855097-9854772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
55, 130
               

               
Conread position:
               
11-425
               

               
Cow position:
               
chr18:4707760-4707334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 85
               

               
Conread position:
               
11-483
               

               
Cow position:
               
chr18:28767893-28768365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 211
               

               
Conread position:
               
13-483
               

               
Cow position:
               
chr18:35636819-35636347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 210
               

               
Conread position:
               
15-467
               

               
Cow position:
               
chr18:49161926-49161453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
16-483
               

               
Cow position:
               
chr18:3159068-3158598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 68
               

               
Conread position:
               
18-477
               

               
Cow position:
               
chr18:52693009-52693455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
23-483
               

               
Cow position:
               
chr18:22121342-22120886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 168
               

               
Conread position:
               
24-284
               

               
Cow position:
               
chr18:51679334-51679071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 63
               

               
Conread position:
               
24-483
               

               
Cow position:
               
chr18:11322128-11322595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 68
               

               
Conread position:
               
25-415
               

               
Cow position:
               
chr18:20864526-20864924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 162
               

               
Conread position:
               
26-399
               

               
Cow position:
               
chr18:54656826-54657214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 199
               

               
Conread position:
               
27-483
               

               
Cow position:
               
chr18:12241813-12242276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
45, 91
               

               
Conread position:
               
28-483
               

               
Cow position:
               
chr18:6103559-6103098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
30-479
               

               
Cow position:
               
chr18:7486797-7487245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
34-414
               

               
Cow position:
               
chr18:238812-238409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
37-401
               

               
Cow position:
               
chr18:27388107-27388474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
43-483
               

               
Cow position:
               
chr18:36097775-36098211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
53-478
               

               
Cow position:
               
chr18:21527974-21528397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
53-483
               

               
Cow position:
               
chr18:26001794-26001353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
60-481
               

               
Cow position:
               
chr18:26937304-26937713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 30
               

               
Conread position:
               
67-478
               

               
Cow position:
               
chr18:21195757-21195347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 292
               

               
Conread position:
               
70-403
               

               
Cow position:
               
chr18:5646829-5647171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
71-472
               

               
Cow position:
               
chr18:38606823-38607215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
77-311
               

               
Cow position:
               
chr18:46321676-46321444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 146
               

               
Conread position:
               
77-413
               

               
Cow position:
               
chr18:26286504-26286843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 149
               

               
Conread position:
               
77-413
               

               
Cow position:
               
chr18:36445024-36445372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
87-479
               

               
Cow position:
               
chr18:29371470-29371862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 157
               

               
Conread position:
               
90-483
               

               
Cow position:
               
chr18:14586870-14586471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 135
               

               
Conread position:
               
92-483
               

               
Cow position:
               
chr18:15881246-15880845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 133
               

               
Conread position:
               
96-458
               

               
Cow position:
               
chr18:55396929-55397284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 128
               

               
Conread position:
               
98-461
               

               
Cow position:
               
chr18:49665543-49665174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 100
               

               
Conread position:
               
100-482
               

               
Cow position:
               
chr18:29796817-29796430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 209
               

               
Conread position:
               
100-483
               

               
Cow position:
               
chr18:39662393-39662778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 133
               

               
Conread position:
               
108-479
               

               
Cow position:
               
chr18:45104823-45104446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 117
               

               
Conread position:
               
111-401
               

               
Cow position:
               
chr18:49200274-49200565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
187, 77
               

               
Conread position:
               
111-458
               

               
Cow position:
               
chr18:41270714-41271060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 273
               

               
Conread position:
               
111-479
               

               
Cow position:
               
chr18:1585476-1585118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
112-483
               

               
Cow position:
               
chr18:20174502-20174130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 113
               

               
Conread position:
               
112-484
               

               
Cow position:
               
chr18:40471968-40472349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
65, 136
               

               
Conread position:
               
113-407
               

               
Cow position:
               
chr18:9818469-9818765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 99
               

               
Conread position:
               
115-474
               

               
Cow position:
               
chr18:35537579-35537240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 53
               

               
Conread position:
               
117-479
               

               
Cow position:
               
chr18:2774954-2774606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
119-483
               

               
Cow position:
               
chr18:32121425-32121068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
128-480
               

               
Cow position:
               
chr18:35797265-35797620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
51, 97
               

               
Conread position:
               
129-483
               

               
Cow position:
               
chr18:56159104-56159461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
139-405
               

               
Cow position:
               
chr18:11233084-11233358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
139-481
               

               
Cow position:
               
chr18:56181800-56181463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
143-482
               

               
Cow position:
               
chr18:51298139-51298481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
144-486
               

               
Cow position:
               
chr18:8105283-8104943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 106
               

               
Conread position:
               
145-479
               

               
Cow position:
               
chr18:56172359-56172015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
31, 80
               

               
Conread position:
               
153-446
               

               
Cow position:
               
chr18:52382366-52382666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
156-421
               

               
Cow position:
               
chr18:35827738-35827470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
156-483
               

               
Cow position:
               
chr18:29958474-29958165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 65
               

               
Conread position:
               
159-483
               

               
Cow position:
               
chr18:19273424-19273097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
159-483
               

               
Cow position:
               
chr18:55001061-55000742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
118, 61
               

               
Conread position:
               
162-416
               

               
Cow position:
               
chr18:6275494-6275755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
163-483
               

               
Cow position:
               
chr18:44549225-44548913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
165-480
               

               
Cow position:
               
chr18:21103076-21102776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
165-483
               

               
Cow position:
               
chr18:38344489-38344805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
129, 16
               

               
Conread position:
               
169-430
               

               
Cow position:
               
chr18:12113679-12113429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
169-457
               

               
Cow position:
               
chr18:48290750-48290466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
172-436
               

               
Cow position:
               
chr18:48036471-48036730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
172-458
               

               
Cow position:
               
chr18:26586974-26586683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
128, 252
               

               
Conread position:
               
172-478
               

               
Cow position:
               
chr18:15025368-15025667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
172-484
               

               
Cow position:
               
chr18:26355331-26355028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
119, 45
               

               
Conread position:
               
174-441
               

               
Cow position:
               
chr18:18958098-18957839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
143, 48
               

               
Conread position:
               
174-487
               

               
Cow position:
               
chr18:4380988-4381297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
145, 25
               

               
Conread position:
               
175-399
               

               
Cow position:
               
chr18:14127274-14127048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
138, 43
               

               
Conread position:
               
179-483
               

               
Cow position:
               
chr18:16726345-16726648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
128, 18
               

               
Conread position:
               
181-483
               

               
Cow position:
               
chr18:2592473-2592165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 41
               

               
Conread position:
               
182-458
               

               
Cow position:
               
chr18:11166680-11166955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 40
               

               
Conread position:
               
182-461
               

               
Cow position:
               
chr18:23808172-23807883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
140, 40
               

               
Conread position:
               
183-418
               

               
Cow position:
               
chr18:13359764-13360002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
183-483
               

               
Cow position:
               
chr18:22214188-22214487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 87
               

               
Conread position:
               
187-483
               

               
Cow position:
               
chr18:6610152-6609859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 94
               

               
Conread position:
               
188-458
               

               
Cow position:
               
chr18:16847405-16847669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 34
               

               
Conread position:
               
188-480
               

               
Cow position:
               
chr18:23652906-23652624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
189-462
               

               
Cow position:
               
chr18:52658128-52658390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
132, 70
               

               
Conread position:
               
190-393
               

               
Cow position:
               
chr18:4529229-4529423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
190-405
               

               
Cow position:
               
chr18:47931151-47930940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
132, 28
               

               
Conread position:
               
190-460
               

               
Cow position:
               
chr18:31725175-31724899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
104, 28
               

               
Conread position:
               
190-471
               

               
Cow position:
               
chr18:11680429-11680711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
190-480
               

               
Cow position:
               
chr18:30341454-30341184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
148, 58
               

               
Conread position:
               
190-482
               

               
Cow position:
               
chr18:50381966-50382246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
190-483
               

               
Cow position:
               
chr18:249094-248816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
224, 32
               

               
Conread position:
               
190-483
               

               
Cow position:
               
chr18:268102-267816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 28
               

               
Conread position:
               
190-483
               

               
Cow position:
               
chr18:25647540-25647249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 28
               

               
Conread position:
               
190-483
               

               
Cow position:
               
chr18:33157530-33157819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 32
               

               
Conread position:
               
190-483
               

               
Cow position:
               
chr18:47517499-47517216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
132, 28
               

               
Conread position:
               
190-495
               

               
Cow position:
               
chr18:4649026-4648734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
191-474
               

               
Cow position:
               
chr18:54658011-54658302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
133, 68
               

               
Conread position:
               
191-485
               

               
Cow position:
               
chr18:31586654-31586374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
114, 31
               

               
Conread position:
               
192-483
               

               
Cow position:
               
chr18:55498777-55499071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
130, 37
               

               
Conread position:
               
193-479
               

               
Cow position:
               
chr18:25282843-25282558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
193-482
               

               
Cow position:
               
chr18:4369068-4368778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
86, 29
               

               
Conread position:
               
196-483
               

               
Cow position:
               
chr18:47525121-47525407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
200-483
               

               
Cow position:
               
chr18:4668775-4668500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
200-483
               

               
Cow position:
               
chr18:46437034-46436765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
213, 56
               

               
Conread position:
               
204-479
               

               
Cow position:
               
chr18:2480364-2480651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 211
               

               
Conread position:
               
209-481
               

               
Cow position:
               
chr18:3044158-3044446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
209-483
               

               
Cow position:
               
chr18:5711940-5711654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
113, 89
               

               
Conread position:
               
213-446
               

               
Cow position:
               
chr18:19761430-19761663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
213-483
               

               
Cow position:
               
chr18:10322531-10322805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
90, 193
               

               
Conread position:
               
214-483
               

               
Cow position:
               
chr18:48453425-48453687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
92, 156
               

               
Conread position:
               
222-412
               

               
Cow position:
               
chr18:21768367-21768563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
66, 93
               

               
Conread position:
               
222-419
               

               
Cow position:
               
chr18:12023893-12023696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
98, 76
               

               
Conread position:
               
222-467
               

               
Cow position:
               
chr18:35582362-35582114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 94
               

               
Conread position:
               
222-483
               

               
Cow position:
               
chr18:37382358-37382094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
72, 239
               

               
Conread position:
               
223-483
               

               
Cow position:
               
chr18:22411876-22411612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
74, 203
               

               
Conread position:
               
224-483
               

               
Cow position:
               
chr18:22056112-22055875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
168, 43
               

               
Conread position:
               
230-483
               

               
Cow position:
               
chr18:17649988-17649739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
175, 85
               

               
Conread position:
               
233-484
               

               
Cow position:
               
chr18:20482123-20481882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
61, 138
               

               
Conread position:
               
236-484
               

               
Cow position:
               
chr18:21205120-21205365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
237-485
               

               
Cow position:
               
chr18:19363687-19363937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
67, 10
               

               
Conread position:
               
240-418
               

               
Cow position:
               
chr18:24636272-24636438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
240-483
               

               
Cow position:
               
chr18:12809617-12809854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 66
               

               
Conread position:
               
240-483
               

               
Cow position:
               
chr18:32883059-32883306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
45, 191
               

               
Conread position:
               
240-483
               

               
Cow position:
               
chr18:52854823-52855054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
243-418
               

               
Cow position:
               
chr18:28823208-28823028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
243-489
               

               
Cow position:
               
chr18:247923-247682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 166
               

               
Conread position:
               
245-483
               

               
Cow position:
               
chr18:48829024-48828775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
45, 216
               

               
Conread position:
               
247-477
               

               
Cow position:
               
chr18:25984808-25984577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
41, 181
               

               
Conread position:
               
247-483
               

               
Cow position:
               
chr18:4496123-4495887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
75, 161
               

               
Conread position:
               
249-483
               

               
Cow position:
               
chr18:10977444-10977211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 130
               

               
Conread position:
               
250-480
               

               
Cow position:
               
chr18:219100-219336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
254-454
               

               
Cow position:
               
chr18:1582511-1582300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 124
               

               
Conread position:
               
255-479
               

               
Cow position:
               
chr18:51392873-51392646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 135
               

               
Conread position:
               
259-483
               

               
Cow position:
               
chr18:2864222-2863991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
260-455
               

               
Cow position:
               
chr18:53962461-53962663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
261-483
               

               
Cow position:
               
chr18:39434602-39434825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
26, 139
               

               
Conread position:
               
263-478
               

               
Cow position:
               
chr18:47812249-47812465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
5, 161
               

               
Conread position:
               
265-483
               

               
Cow position:
               
chr18:3211651-3211877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
268-484
               

               
Cow position:
               
chr18:7415244-7415031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 148
               

               
Conread position:
               
270-435
               

               
Cow position:
               
chr18:29188797-29188968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
270-458
               

               
Cow position:
               
chr18:18868531-18868729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
277-438
               

               
Cow position:
               
chr18:18815882-18815713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
279-483
               

               
Cow position:
               
chr18:18369566-18369362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
46, 190
               

               
Conread position:
               
285-483
               

               
Cow position:
               
chr18:5072608-5072411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
286-483
               

               
Cow position:
               
chr18:7108931-7109129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
288-478
               

               
Cow position:
               
chr18:27637016-27637206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
288-483
               

               
Cow position:
               
chr18:19896650-19896452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
34, 141
               

               
Conread position:
               
292-483
               

               
Cow position:
               
chr18:8299823-8300018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
292-483
               

               
Cow position:
               
chr18:29991707-29991511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
304-483
               

               
Cow position:
               
chr18:43555703-43555525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
316-483
               

               
Cow position:
               
chr18:4556333-4556167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 107
               

               
Conread position:
               
318-480
               

               
Cow position:
               
chr18:56191133-56190965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
318-481
               

               
Cow position:
               
chr18:4952371-4952209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
318-481
               

               
Cow position:
               
chr18:30586382-30586224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
318-483
               

               
Cow position:
               
chr18:51850722-51850561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
19, 105
               

               
Conread position:
               
324-479
               

               
Cow position:
               
chr18:22274991-22274842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
325-483
               

               
Cow position:
               
chr18:12273502-12273657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
328-483
               

               
Cow position:
               
chr18:51643518-51643366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
331-446
               

               
Cow position:
               
chr18:19433140-19433021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
331-478
               

               
Cow position:
               
chr18:29474591-29474738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
331-483
               

               
Cow position:
               
chr18:5632116-5632267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
331-483
               

               
Cow position:
               
chr18:16997103-16997253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
335-480
               

               
Cow position:
               
chr18:4264536-4264397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
338-463
               

               
Cow position:
               
chr18:48242047-48242169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
338-474
               

               
Cow position:
               
chr18:30295794-30295658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 83
               

               
Conread position:
               
338-483
               

               
Cow position:
               
chr18:10214338-10214192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
375-482
               

               
Cow position:
               
chr18:14779412-14779307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 45
               
Show alignments to all cow chromosomes.