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Cow genome map

           
Conread name:
           
Pig4-TMW8013E01
        

               
Conread position:
               
1-133
               

               
Cow position:
               
chr28:7014156-7014023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
1-133
               

               
Cow position:
               
chr28:25767783-25767916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr28:13865355-13865534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr28:28076915-28076734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 92
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr28:15264409-15264227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr28:17576661-17576458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr28:22488485-22488692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr28:790138-789916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr28:10772879-10773098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 96
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr28:22582590-22582882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr28:32823914-32824222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr28:28340853-28341183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr28:7372697-7372351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr28:30249935-30250289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr28:5371353-5371001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr28:34655893-34656253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
85, 226
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr28:22304415-22304794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr28:10563203-10563604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
85, 210
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr28:786466-786874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 221
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr28:1261814-1262222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr28:1957172-1957580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr28:2645522-2645925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
169, 77
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr28:16182157-16182562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
85, 221
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr28:18096531-18096937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
85, 221
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr28:23309527-23309119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr28:29222478-29222075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr28:22132476-22132884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 228
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr28:15272705-15272300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr28:11451920-11451491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 59
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr28:25805235-25805653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
64, 177
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr28:15375267-15374840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 71
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr28:16215342-16214916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 92
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr28:7685122-7684694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr28:11733559-11733131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
172, 45
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr28:10607056-10606625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 106
               

               
Conread position:
               
1-460
               

               
Cow position:
               
chr28:4536035-4536470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 88
               

               
Conread position:
               
1-460
               

               
Cow position:
               
chr28:22500925-22500483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr28:5553355-5552912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 51
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr28:15063768-15063311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr28:25701304-25700834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 52
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr28:15605332-15605813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr28:21354778-21355262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 72
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr28:22577009-22577491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr28:24671825-24672296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 88
               

               
Conread position:
               
1-481
               

               
Cow position:
               
chr28:21363314-21363782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 84
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr28:800728-800241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr28:5637860-5638347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr28:10512698-10513178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr28:18790569-18791052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 63
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr28:22735883-22736380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 420
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr28:24592319-24592806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr28:25829204-25829687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr28:4282938-4282454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 225
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr28:13473866-13474337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 62
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr28:14657251-14657734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 122
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr28:17316419-17316902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 167
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr28:20124343-20124821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr28:23793770-23793274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr28:25399438-25399909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 92
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr28:25806151-25806610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr28:26922822-26922331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr28:5770922-5771404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 41
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr28:21598697-21598214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
1-498
               

               
Cow position:
               
chr28:18354750-18354276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 69
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr28:6577208-6577721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 168
               

               
Conread position:
               
1-651
               

               
Cow position:
               
chr28:10868602-10867942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr28:31842128-31841922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 99
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr28:22354137-22354342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
171, 83
               

               
Conread position:
               
2-214
               

               
Cow position:
               
chr28:7981148-7980932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr28:13290623-13290401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr28:6090715-6090944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
63, 93
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr28:3001056-3000805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr28:25128428-25128131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr28:14742353-14742689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 87
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr28:1778335-1778696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
59, 94
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr28:21129568-21129188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 85
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr28:21672369-21672806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
2-472
               

               
Cow position:
               
chr28:10589471-10588995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 68
               

               
Conread position:
               
2-478
               

               
Cow position:
               
chr28:11752592-11752107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
2-478
               

               
Cow position:
               
chr28:16211537-16211069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
2-480
               

               
Cow position:
               
chr28:29392555-29393047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
65, 87
               

               
Conread position:
               
2-483
               

               
Cow position:
               
chr28:3745759-3746239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 197
               

               
Conread position:
               
2-483
               

               
Cow position:
               
chr28:5684259-5684740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 92
               

               
Conread position:
               
2-483
               

               
Cow position:
               
chr28:30327526-30327051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
3-478
               

               
Cow position:
               
chr28:16109508-16109971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 192
               

               
Conread position:
               
4-166
               

               
Cow position:
               
chr28:330000-329839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 146
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr28:26370465-26370632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr28:32747472-32747646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 94
               

               
Conread position:
               
4-182
               

               
Cow position:
               
chr28:19393430-19393610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
4-184
               

               
Cow position:
               
chr28:22439445-22439631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 137
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr28:32717444-32717262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
4-188
               

               
Cow position:
               
chr28:1537238-1537424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-189
               

               
Cow position:
               
chr28:27660191-27659998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
57, 89
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr28:13607262-13607453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 149
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr28:15429472-15429665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr28:34199894-34199704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
4-197
               

               
Cow position:
               
chr28:6229627-6229427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr28:3494067-3493869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
82, 67
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr28:20310750-20310958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
59, 119
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr28:22320852-22321052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
68, 94
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr28:19552569-19552361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
4-216
               

               
Cow position:
               
chr28:2090153-2090365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
68, 189
               

               
Conread position:
               
4-230
               

               
Cow position:
               
chr28:8070494-8070263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
57, 89
               

               
Conread position:
               
4-231
               

               
Cow position:
               
chr28:10699414-10699200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 119
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr28:12081120-12080886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
62, 87
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr28:30257930-30257669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
43, 121
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr28:20251533-20251799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
58, 143
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr28:24686178-24686466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr28:11690659-11690345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 237
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr28:28185357-28185654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 176
               

               
Conread position:
               
4-318
               

               
Cow position:
               
chr28:4458425-4458736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
4-319
               

               
Cow position:
               
chr28:22359110-22359433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
55, 181
               

               
Conread position:
               
4-319
               

               
Cow position:
               
chr28:23254230-23253922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-320
               

               
Cow position:
               
chr28:4957688-4957371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
70, 164
               

               
Conread position:
               
4-322
               

               
Cow position:
               
chr28:12998428-12998754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 89
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr28:7724118-7723774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr28:28112517-28112186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 101
               

               
Conread position:
               
4-334
               

               
Cow position:
               
chr28:4046699-4047035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 88
               

               
Conread position:
               
4-335
               

               
Cow position:
               
chr28:24215438-24215786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 211
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr28:18180576-18180235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 89
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr28:10977421-10977784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-415
               

               
Cow position:
               
chr28:28590288-28590710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
4-416
               

               
Cow position:
               
chr28:25070658-25071097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 154
               

               
Conread position:
               
4-417
               

               
Cow position:
               
chr28:10642465-10642042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 89
               

               
Conread position:
               
4-417
               

               
Cow position:
               
chr28:14150795-14151206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 165
               

               
Conread position:
               
4-419
               

               
Cow position:
               
chr28:26614452-26614860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
4-453
               

               
Cow position:
               
chr28:21844512-21844964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 84
               

               
Conread position:
               
4-454
               

               
Cow position:
               
chr28:23839772-23840212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
4-458
               

               
Cow position:
               
chr28:10478768-10478331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
68, 83
               

               
Conread position:
               
4-460
               

               
Cow position:
               
chr28:5768759-5769212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 91
               

               
Conread position:
               
4-466
               

               
Cow position:
               
chr28:8911664-8911203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 83
               

               
Conread position:
               
4-474
               

               
Cow position:
               
chr28:4070522-4070995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-474
               

               
Cow position:
               
chr28:11426979-11426513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-475
               

               
Cow position:
               
chr28:28766340-28765874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 47
               

               
Conread position:
               
4-477
               

               
Cow position:
               
chr28:3914267-3914748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 94
               

               
Conread position:
               
4-477
               

               
Cow position:
               
chr28:10529908-10529459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-477
               

               
Cow position:
               
chr28:22322821-22323300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 222
               

               
Conread position:
               
4-478
               

               
Cow position:
               
chr28:21868008-21868489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
4-479
               

               
Cow position:
               
chr28:24965942-24966417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 99
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr28:2814942-2814471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 84
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr28:34208270-34208743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
4-481
               

               
Cow position:
               
chr28:18590820-18591306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
4-481
               

               
Cow position:
               
chr28:26103284-26103741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 90
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr28:16084884-16085361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 118
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr28:661668-662143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr28:3144330-3143838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr28:8022554-8022065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr28:9285807-9285333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr28:11585650-11585165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr28:11787149-11786680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 79
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr28:20312830-20313314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 224
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr28:21380441-21380918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 45
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr28:25726935-25727409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr28:29199286-29199767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr28:32174206-32174666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
60, 205
               

               
Conread position:
               
4-484
               

               
Cow position:
               
chr28:6960054-6960547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 217
               

               
Conread position:
               
4-490
               

               
Cow position:
               
chr28:332260-332753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
82, 221
               

               
Conread position:
               
4-490
               

               
Cow position:
               
chr28:6776076-6775584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
68, 94
               

               
Conread position:
               
4-505
               

               
Cow position:
               
chr28:20408940-20409453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
4-519
               

               
Cow position:
               
chr28:17287787-17288293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr28:10172905-10172715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
5-216
               

               
Cow position:
               
chr28:1883296-1883094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
67, 73
               

               
Conread position:
               
5-327
               

               
Cow position:
               
chr28:4058286-4058613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
5-416
               

               
Cow position:
               
chr28:34082457-34082043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 82
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr28:10900379-10900797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 82
               

               
Conread position:
               
5-427
               

               
Cow position:
               
chr28:12049144-12048719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
5-435
               

               
Cow position:
               
chr28:26781641-26782078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 217
               

               
Conread position:
               
5-446
               

               
Cow position:
               
chr28:11047134-11047592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 421
               

               
Conread position:
               
5-462
               

               
Cow position:
               
chr28:15712820-15713276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 218
               

               
Conread position:
               
5-482
               

               
Cow position:
               
chr28:25556405-25555930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 220
               

               
Conread position:
               
5-483
               

               
Cow position:
               
chr28:5792265-5792745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 54
               

               
Conread position:
               
5-483
               

               
Cow position:
               
chr28:16346958-16346494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
5-483
               

               
Cow position:
               
chr28:21104286-21103791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 83
               

               
Conread position:
               
5-483
               

               
Cow position:
               
chr28:32300814-32300317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 88
               

               
Conread position:
               
6-474
               

               
Cow position:
               
chr28:7864890-7865355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 97
               

               
Conread position:
               
6-493
               

               
Cow position:
               
chr28:31648631-31649133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
7-411
               

               
Cow position:
               
chr28:18717565-18717154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 190
               

               
Conread position:
               
7-483
               

               
Cow position:
               
chr28:23530424-23530911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 252
               

               
Conread position:
               
8-315
               

               
Cow position:
               
chr28:16246703-16246400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 86
               

               
Conread position:
               
9-206
               

               
Cow position:
               
chr28:23094807-23095007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
53, 129
               

               
Conread position:
               
10-353
               

               
Cow position:
               
chr28:32729677-32729334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
55, 279
               

               
Conread position:
               
10-476
               

               
Cow position:
               
chr28:4139115-4138641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 77
               

               
Conread position:
               
10-483
               

               
Cow position:
               
chr28:25248931-25249391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
11-461
               

               
Cow position:
               
chr28:22171166-22170694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 78
               

               
Conread position:
               
15-483
               

               
Cow position:
               
chr28:25563648-25564122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
16-489
               

               
Cow position:
               
chr28:1837569-1838037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 78
               

               
Conread position:
               
17-483
               

               
Cow position:
               
chr28:5930922-5931392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
20-483
               

               
Cow position:
               
chr28:11527688-11527221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 67
               

               
Conread position:
               
21-413
               

               
Cow position:
               
chr28:2280091-2279696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
23-515
               

               
Cow position:
               
chr28:30294011-30293518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 200
               

               
Conread position:
               
24-475
               

               
Cow position:
               
chr28:26268912-26269360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 95
               

               
Conread position:
               
27-478
               

               
Cow position:
               
chr28:12430186-12430638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
37-467
               

               
Cow position:
               
chr28:4021973-4022409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 52
               

               
Conread position:
               
37-483
               

               
Cow position:
               
chr28:19222555-19222114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 191
               

               
Conread position:
               
39-479
               

               
Cow position:
               
chr28:23720935-23721367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
43-413
               

               
Cow position:
               
chr28:13356984-13356605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
57-472
               

               
Cow position:
               
chr28:8682239-8681813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 29
               

               
Conread position:
               
61-443
               

               
Cow position:
               
chr28:6051331-6051735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
62-483
               

               
Cow position:
               
chr28:7268316-7267906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 10
               

               
Conread position:
               
76-455
               

               
Cow position:
               
chr28:16364340-16363956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
77-482
               

               
Cow position:
               
chr28:5826580-5826986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
77-483
               

               
Cow position:
               
chr28:8347353-8347768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 219
               

               
Conread position:
               
78-480
               

               
Cow position:
               
chr28:12942025-12942416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
245, 8
               

               
Conread position:
               
78-483
               

               
Cow position:
               
chr28:10744837-10745251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 151
               

               
Conread position:
               
84-403
               

               
Cow position:
               
chr28:11759899-11759587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 141
               

               
Conread position:
               
85-460
               

               
Cow position:
               
chr28:3474611-3474975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
87, 136
               

               
Conread position:
               
86-483
               

               
Cow position:
               
chr28:9426702-9426313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 139
               

               
Conread position:
               
91-409
               

               
Cow position:
               
chr28:17738433-17738105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
96-475
               

               
Cow position:
               
chr28:34878319-34877939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 31
               

               
Conread position:
               
96-483
               

               
Cow position:
               
chr28:13267431-13267830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 70
               

               
Conread position:
               
99-483
               

               
Cow position:
               
chr28:14933615-14933995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 122
               

               
Conread position:
               
100-417
               

               
Cow position:
               
chr28:14493196-14493517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 34
               

               
Conread position:
               
100-483
               

               
Cow position:
               
chr28:33884064-33884439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
55, 49
               

               
Conread position:
               
106-430
               

               
Cow position:
               
chr28:34443103-34442764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
109-500
               

               
Cow position:
               
chr28:28904021-28903609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 396
               

               
Conread position:
               
110-480
               

               
Cow position:
               
chr28:7698313-7697944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 64
               

               
Conread position:
               
111-483
               

               
Cow position:
               
chr28:23675813-23676175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 63
               

               
Conread position:
               
112-446
               

               
Cow position:
               
chr28:7590517-7590181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 113
               

               
Conread position:
               
115-486
               

               
Cow position:
               
chr28:16406755-16407133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
119-476
               

               
Cow position:
               
chr28:16412420-16412779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
120-483
               

               
Cow position:
               
chr28:6059795-6059433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
122-458
               

               
Cow position:
               
chr28:19222918-19222590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
123-473
               

               
Cow position:
               
chr28:22371998-22371654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
123-477
               

               
Cow position:
               
chr28:7512913-7512553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 100
               

               
Conread position:
               
124-467
               

               
Cow position:
               
chr28:4880586-4880243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 101
               

               
Conread position:
               
126-483
               

               
Cow position:
               
chr28:4308218-4307860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 99
               

               
Conread position:
               
127-426
               

               
Cow position:
               
chr28:2124120-2124412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
127-446
               

               
Cow position:
               
chr28:16401578-16401901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
127-483
               

               
Cow position:
               
chr28:26684796-26685154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 47
               

               
Conread position:
               
128-405
               

               
Cow position:
               
chr28:10888345-10888627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 97
               

               
Conread position:
               
130-479
               

               
Cow position:
               
chr28:15007846-15008191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 193
               

               
Conread position:
               
134-485
               

               
Cow position:
               
chr28:24343060-24343405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
67, 42
               

               
Conread position:
               
139-416
               

               
Cow position:
               
chr28:2800939-2801209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
142, 79
               

               
Conread position:
               
147-483
               

               
Cow position:
               
chr28:23008027-23007693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 144
               

               
Conread position:
               
152-451
               

               
Cow position:
               
chr28:9390659-9390358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 74
               

               
Conread position:
               
153-399
               

               
Cow position:
               
chr28:34852488-34852743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
153-482
               

               
Cow position:
               
chr28:7228677-7228349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
154-419
               

               
Cow position:
               
chr28:29455944-29455678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
168, 15
               

               
Conread position:
               
155-483
               

               
Cow position:
               
chr28:31110296-31109967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
159-479
               

               
Cow position:
               
chr28:31987318-31987647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
160-483
               

               
Cow position:
               
chr28:25596348-25596668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
164-457
               

               
Cow position:
               
chr28:26784750-26784452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
171-483
               

               
Cow position:
               
chr28:616131-616423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
171-483
               

               
Cow position:
               
chr28:23410597-23410288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
172-483
               

               
Cow position:
               
chr28:26743351-26743663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 46
               

               
Conread position:
               
180-483
               

               
Cow position:
               
chr28:3408480-3408181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
120, 38
               

               
Conread position:
               
181-408
               

               
Cow position:
               
chr28:16244021-16243793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
99, 41
               

               
Conread position:
               
181-417
               

               
Cow position:
               
chr28:26533280-26533523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
113, 37
               

               
Conread position:
               
181-423
               

               
Cow position:
               
chr28:24996851-24996607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
181-483
               

               
Cow position:
               
chr28:2862599-2862905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
181-483
               

               
Cow position:
               
chr28:8408473-8408771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
181-483
               

               
Cow position:
               
chr28:16253117-16252819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 36
               

               
Conread position:
               
182-478
               

               
Cow position:
               
chr28:25424564-25424262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
182-479
               

               
Cow position:
               
chr28:6861691-6861987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
6, 68
               

               
Conread position:
               
182-479
               

               
Cow position:
               
chr28:29434686-29434395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
106, 40
               

               
Conread position:
               
182-483
               

               
Cow position:
               
chr28:19026264-19025968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 40
               

               
Conread position:
               
185-478
               

               
Cow position:
               
chr28:33051762-33052068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
186-457
               

               
Cow position:
               
chr28:13607628-13607900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
88, 148
               

               
Conread position:
               
188-482
               

               
Cow position:
               
chr28:27218065-27218359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
106, 34
               

               
Conread position:
               
189-479
               

               
Cow position:
               
chr28:19080102-19079812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
91, 33
               

               
Conread position:
               
190-467
               

               
Cow position:
               
chr28:5773389-5773657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 28
               

               
Conread position:
               
190-479
               

               
Cow position:
               
chr28:13865592-13865879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
209, 32
               

               
Conread position:
               
190-483
               

               
Cow position:
               
chr28:26719107-26719380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
191-423
               

               
Cow position:
               
chr28:13242076-13241847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
143, 31
               

               
Conread position:
               
191-479
               

               
Cow position:
               
chr28:3078930-3078648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
192-483
               

               
Cow position:
               
chr28:21502144-21502429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 26
               

               
Conread position:
               
192-483
               

               
Cow position:
               
chr28:22345768-22346058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
193-445
               

               
Cow position:
               
chr28:22321172-22321426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
101, 25
               

               
Conread position:
               
194-476
               

               
Cow position:
               
chr28:2898746-2899019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
125, 28
               

               
Conread position:
               
199-461
               

               
Cow position:
               
chr28:7547591-7547312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
200-489
               

               
Cow position:
               
chr28:13176922-13176638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
88, 22
               

               
Conread position:
               
201-483
               

               
Cow position:
               
chr28:4841639-4841356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
203-483
               

               
Cow position:
               
chr28:4914342-4914054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
208-417
               

               
Cow position:
               
chr28:26340101-26340316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
209-419
               

               
Cow position:
               
chr28:3077759-3077966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
209-454
               

               
Cow position:
               
chr28:19394395-19394627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
209-483
               

               
Cow position:
               
chr28:34430661-34430386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
213-478
               

               
Cow position:
               
chr28:9099704-9099968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
215-482
               

               
Cow position:
               
chr28:750997-751263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
222-419
               

               
Cow position:
               
chr28:8656958-8656764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 19
               

               
Conread position:
               
222-483
               

               
Cow position:
               
chr28:5144745-5144484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 145
               

               
Conread position:
               
224-403
               

               
Cow position:
               
chr28:5188622-5188443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
115, 87
               

               
Conread position:
               
225-483
               

               
Cow position:
               
chr28:10053558-10053288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
236-479
               

               
Cow position:
               
chr28:25282996-25283233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
240-468
               

               
Cow position:
               
chr28:22739596-22739814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
244-476
               

               
Cow position:
               
chr28:25459325-25459564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
40, 217
               

               
Conread position:
               
244-483
               

               
Cow position:
               
chr28:14512325-14512570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
247-421
               

               
Cow position:
               
chr28:10844921-10845094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
75, 151
               

               
Conread position:
               
250-483
               

               
Cow position:
               
chr28:4881440-4881203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
10, 182
               

               
Conread position:
               
252-483
               

               
Cow position:
               
chr28:4835038-4834807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
26, 137
               

               
Conread position:
               
253-483
               

               
Cow position:
               
chr28:26982938-26982701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 180
               

               
Conread position:
               
255-483
               

               
Cow position:
               
chr28:23724645-23724425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
47, 144
               

               
Conread position:
               
257-467
               

               
Cow position:
               
chr28:118243-118029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
37, 170
               

               
Conread position:
               
258-460
               

               
Cow position:
               
chr28:3105052-3105273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
259-467
               

               
Cow position:
               
chr28:19023947-19024166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 121
               

               
Conread position:
               
259-477
               

               
Cow position:
               
chr28:18760228-18760017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
259-479
               

               
Cow position:
               
chr28:11866855-11866632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 106
               

               
Conread position:
               
259-483
               

               
Cow position:
               
chr28:17235914-17235699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 116
               

               
Conread position:
               
270-457
               

               
Cow position:
               
chr28:657622-657440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
270-481
               

               
Cow position:
               
chr28:25728031-25728232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
270-483
               

               
Cow position:
               
chr28:2132097-2131887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
274-483
               

               
Cow position:
               
chr28:2752666-2752457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
279-483
               

               
Cow position:
               
chr28:9928450-9928254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 93
               

               
Conread position:
               
282-478
               

               
Cow position:
               
chr28:33032103-33032294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
127, 22
               

               
Conread position:
               
282-483
               

               
Cow position:
               
chr28:22338832-22339031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
283-483
               

               
Cow position:
               
chr28:18186394-18186593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
288-483
               

               
Cow position:
               
chr28:32365689-32365881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
289-472
               

               
Cow position:
               
chr28:7542240-7542056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 119
               

               
Conread position:
               
299-483
               

               
Cow position:
               
chr28:30746873-30746693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
300-483
               

               
Cow position:
               
chr28:2872773-2872956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
302-483
               

               
Cow position:
               
chr28:27161472-27161289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
27, 120
               

               
Conread position:
               
305-483
               

               
Cow position:
               
chr28:22571804-22571631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
318-479
               

               
Cow position:
               
chr28:3449175-3449336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
318-483
               

               
Cow position:
               
chr28:7009099-7008941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
319-483
               

               
Cow position:
               
chr28:5193196-5193368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
327-479
               

               
Cow position:
               
chr28:18370122-18369974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
330-483
               

               
Cow position:
               
chr28:3726771-3726925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 89
               

               
Conread position:
               
331-467
               

               
Cow position:
               
chr28:7644338-7644475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
331-483
               

               
Cow position:
               
chr28:3011384-3011232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
74, 95
               

               
Conread position:
               
331-483
               

               
Cow position:
               
chr28:5166655-5166805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
331-483
               

               
Cow position:
               
chr28:7372233-7372085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
116, 80
               

               
Conread position:
               
332-479
               

               
Cow position:
               
chr28:19564338-19564195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 36
               
Show alignments to all cow chromosomes.