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Cow genome map

           
Conread name:
           
Pig4-TMW8013E01
        

               
Conread position:
               
1-145
               

               
Cow position:
               
chr4:27655586-27655732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr4:51002694-51002868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
71, 41
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr4:51740196-51740024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr4:11218361-11218536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
71, 84
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr4:4419545-4419726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr4:20298774-20298958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
51, 87
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr4:19410033-19410229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr4:46529489-46529296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr4:55522843-55523038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr4:57721380-57721572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr4:59106364-59106157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr4:28711655-28711851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr4:37691881-37691683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr4:27664444-27664651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr4:30004511-30004306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr4:8704312-8704523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr4:49814473-49814251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr4:55657043-55656822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
71, 84
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr4:1355968-1355711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
71, 51
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr4:8760789-8761052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 99
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr4:22366671-22366934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:38706415-38706148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 222
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr4:11191505-11191794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr4:23578493-23578774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
60, 85
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr4:3893268-3893570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
67, 92
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:27546301-27546602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
71, 103
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr4:42328856-42328550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr4:54161568-54161251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr4:64061531-64061213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
85, 225
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr4:33090212-33089887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 91
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr4:10994002-10993688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 115
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr4:33020145-33019819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
46, 72
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr4:47087550-47087225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
51, 199
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr4:18186901-18186564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr4:14812982-14812640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 51
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr4:33372271-33371915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr4:50019048-50018688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr4:40576371-40576021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 92
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr4:1404581-1404954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 169
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr4:18331585-18331958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr4:7258885-7258508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 149
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr4:5441162-5440782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr4:47264276-47264664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr4:14941854-14942255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
66, 129
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr4:38584376-38584782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
85, 221
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr4:26163430-26163030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr4:3170817-3171216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
85, 135
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr4:21602945-21602534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr4:22896712-22896297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
85, 208
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr4:28855609-28856017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr4:49175985-49176393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 248
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr4:54695537-54695131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
85, 221
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr4:67394741-67395149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr4:5610528-5610125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr4:66918434-66918856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr4:14353141-14352721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 245
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr4:55271215-55270808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 34
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr4:10024835-10025232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr4:34172028-34171611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr4:57555500-57555932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 232
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr4:67392504-67392920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 85
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr4:8439902-8439474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 225
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr4:21589065-21588635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr4:68944635-68944203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr4:53829973-53830415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 217
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr4:64875595-64876032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 221
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr4:39009511-39009948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 219
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr4:19558263-19558710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr4:8377639-8377192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 221
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr4:23647293-23646854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr4:10038823-10039276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr4:10017038-10016605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr4:53999979-53999509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 82
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr4:10122905-10123372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr4:28613362-28613830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr4:65891557-65892001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
224, 69
               

               
Conread position:
               
1-470
               

               
Cow position:
               
chr4:19541664-19542150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 169
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr4:22850180-22849701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr4:30690279-30690730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr4:43147943-43148429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 202
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr4:42596739-42597229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
46, 225
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr4:1436175-1435712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 87
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr4:13589636-13590103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 59
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr4:18547231-18547705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 209
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr4:13327413-13326930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 186
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr4:18255405-18255873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr4:44777692-44777208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 235
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr4:3439932-3440422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr4:61999910-61999426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 85
               

               
Conread position:
               
1-481
               

               
Cow position:
               
chr4:3850093-3850574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 92
               

               
Conread position:
               
1-481
               

               
Cow position:
               
chr4:59871040-59871502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr4:120191-119725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr4:162579-163065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
85, 196
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr4:2253689-2254173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 248
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr4:16859223-16858742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 221
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr4:18738245-18737758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 85
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr4:20616219-20615731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
46, 240
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr4:38864550-38865036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr4:48733175-48733659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
85, 194
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr4:48736377-48736864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 85
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr4:6653288-6653750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 87
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr4:11201361-11201845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 222
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr4:18973983-18974448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 55
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr4:22101723-22101240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 161
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr4:23526232-23526719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 99
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr4:23853740-23854205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr4:27337709-27338195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 86
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr4:27755770-27755279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 88
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr4:30573997-30574493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 225
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr4:36578053-36577605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr4:37620352-37619863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 98
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr4:37703807-37704293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 86
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr4:39231987-39231496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 230
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr4:42480727-42481208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 378
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr4:54190649-54191114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 91
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr4:65431721-65432175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 82
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr4:36892896-36893385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 222
               

               
Conread position:
               
1-485
               

               
Cow position:
               
chr4:38799660-38799173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 94
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr4:25878939-25879424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 72
               

               
Conread position:
               
1-494
               

               
Cow position:
               
chr4:22073761-22073283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 9
               

               
Conread position:
               
1-494
               

               
Cow position:
               
chr4:64072813-64072314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 93
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr4:17775049-17774789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
63, 98
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr4:34223434-34223744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
2-321
               

               
Cow position:
               
chr4:47047283-47047612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 85
               

               
Conread position:
               
2-373
               

               
Cow position:
               
chr4:68233538-68233892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
2-404
               

               
Cow position:
               
chr4:61391657-61391256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 117
               

               
Conread position:
               
2-423
               

               
Cow position:
               
chr4:8413567-8413150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 98
               

               
Conread position:
               
2-450
               

               
Cow position:
               
chr4:31136296-31136748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 129
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr4:21532078-21531645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
2-457
               

               
Cow position:
               
chr4:560945-561400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
2-465
               

               
Cow position:
               
chr4:7429862-7430325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 219
               

               
Conread position:
               
2-467
               

               
Cow position:
               
chr4:19584245-19584725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 35
               

               
Conread position:
               
2-472
               

               
Cow position:
               
chr4:12464390-12464855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
2-472
               

               
Cow position:
               
chr4:13271692-13272157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
2-477
               

               
Cow position:
               
chr4:14471026-14470550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
2-477
               

               
Cow position:
               
chr4:51850741-51851225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
2-478
               

               
Cow position:
               
chr4:19096839-19097308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 62
               

               
Conread position:
               
2-478
               

               
Cow position:
               
chr4:20328171-20327690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 99
               

               
Conread position:
               
2-482
               

               
Cow position:
               
chr4:40415106-40414604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
2-483
               

               
Cow position:
               
chr4:13142981-13142538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 140
               

               
Conread position:
               
2-483
               

               
Cow position:
               
chr4:48152828-48152346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 85
               

               
Conread position:
               
2-483
               

               
Cow position:
               
chr4:51898545-51899031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 85
               

               
Conread position:
               
2-483
               

               
Cow position:
               
chr4:66112531-66112046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 84
               

               
Conread position:
               
3-419
               

               
Cow position:
               
chr4:11091137-11090735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 84
               

               
Conread position:
               
3-483
               

               
Cow position:
               
chr4:26548992-26549507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 93
               

               
Conread position:
               
4-154
               

               
Cow position:
               
chr4:36724530-36724682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
4-157
               

               
Cow position:
               
chr4:39458170-39458324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 85
               

               
Conread position:
               
4-166
               

               
Cow position:
               
chr4:63096776-63096939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-173
               

               
Cow position:
               
chr4:3268763-3268593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
4-173
               

               
Cow position:
               
chr4:33357407-33357577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr4:27186034-27185855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 89
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr4:31174800-31174978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr4:36755261-36755439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr4:43840480-43840308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr4:44901767-44901938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr4:52178004-52177832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr4:54931127-54930957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
4-176
               

               
Cow position:
               
chr4:5631743-5631572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
4-176
               

               
Cow position:
               
chr4:45115090-45114909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr4:60030286-60030471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
65, 144
               

               
Conread position:
               
4-184
               

               
Cow position:
               
chr4:26540780-26540968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 89
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr4:15462763-15462580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-189
               

               
Cow position:
               
chr4:58948411-58948219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr4:6856601-6856788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
4-192
               

               
Cow position:
               
chr4:12128264-12128076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 86
               

               
Conread position:
               
4-192
               

               
Cow position:
               
chr4:61625087-61624892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
4-195
               

               
Cow position:
               
chr4:42638817-42638617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
35, 90
               

               
Conread position:
               
4-197
               

               
Cow position:
               
chr4:8558818-8558626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
175, 58
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr4:21233537-21233335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr4:22861379-22861176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
66, 89
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr4:32249994-32250194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr4:20790285-20790491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr4:40410809-40410610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
172, 81
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chr4:16092072-16091874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 92
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chr4:34181264-34181065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chr4:46596716-46596918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr4:5797070-5797275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
57, 88
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr4:14505792-14505586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 102
               

               
Conread position:
               
4-206
               

               
Cow position:
               
chr4:11922176-11921971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
53, 84
               

               
Conread position:
               
4-218
               

               
Cow position:
               
chr4:65539037-65538813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
64, 89
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr4:35575665-35575884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
4-227
               

               
Cow position:
               
chr4:20887715-20887484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
4-257
               

               
Cow position:
               
chr4:66901120-66901378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr4:54111107-54111360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-267
               

               
Cow position:
               
chr4:42863916-42864191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 102
               

               
Conread position:
               
4-280
               

               
Cow position:
               
chr4:49989760-49989478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 147
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr4:1499596-1499320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
68, 82
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr4:7559976-7559690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
36, 45
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr4:24087223-24087511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr4:41186821-41186538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 83
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr4:33149387-33149675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr4:44263022-44263313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 53
               

               
Conread position:
               
4-302
               

               
Cow position:
               
chr4:46492434-46492737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
59, 228
               

               
Conread position:
               
4-309
               

               
Cow position:
               
chr4:38973857-38974163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
4-309
               

               
Cow position:
               
chr4:44450042-44449731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-322
               

               
Cow position:
               
chr4:42907268-42907603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
62, 154
               

               
Conread position:
               
4-322
               

               
Cow position:
               
chr4:54170914-54171232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 92
               

               
Conread position:
               
4-323
               

               
Cow position:
               
chr4:8120621-8120294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 88
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr4:48205090-48204759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
62, 113
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr4:49409010-49409347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr4:56177354-56177699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
59, 225
               

               
Conread position:
               
4-335
               

               
Cow position:
               
chr4:41287503-41287171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
65, 99
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr4:10613707-10613352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr4:18099423-18099083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 94
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr4:64791432-64791795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
4-386
               

               
Cow position:
               
chr4:29035462-29035849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr4:24432185-24432575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 89
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr4:7250023-7249635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 67
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr4:3070373-3070760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr4:26398876-26399281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
82, 221
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr4:48030359-48030764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 218
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr4:56852443-56852847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 219
               

               
Conread position:
               
4-401
               

               
Cow position:
               
chr4:46668129-46668513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 88
               

               
Conread position:
               
4-411
               

               
Cow position:
               
chr4:10034456-10034856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
4-413
               

               
Cow position:
               
chr4:46708983-46708567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 83
               

               
Conread position:
               
4-416
               

               
Cow position:
               
chr4:351772-352196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 82
               

               
Conread position:
               
4-419
               

               
Cow position:
               
chr4:5874498-5874918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 82
               

               
Conread position:
               
4-419
               

               
Cow position:
               
chr4:67600178-67599775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 82
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr4:11872369-11871946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 84
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr4:47774090-47773676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr4:59333432-59333019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
61, 206
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr4:38998977-38999395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 164
               

               
Conread position:
               
4-425
               

               
Cow position:
               
chr4:46862038-46861624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
62, 89
               

               
Conread position:
               
4-427
               

               
Cow position:
               
chr4:61272091-61271660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 88
               

               
Conread position:
               
4-432
               

               
Cow position:
               
chr4:16340051-16339621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 118
               

               
Conread position:
               
4-452
               

               
Cow position:
               
chr4:27540165-27540610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
4-456
               

               
Cow position:
               
chr4:3475157-3475628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
4-457
               

               
Cow position:
               
chr4:38934930-38935358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 48
               

               
Conread position:
               
4-467
               

               
Cow position:
               
chr4:22841894-22842350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
4-467
               

               
Cow position:
               
chr4:41097457-41097929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 79
               

               
Conread position:
               
4-467
               

               
Cow position:
               
chr4:56233236-56233691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 58
               

               
Conread position:
               
4-468
               

               
Cow position:
               
chr4:43370311-43369836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
4-473
               

               
Cow position:
               
chr4:4319597-4319137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
4-473
               

               
Cow position:
               
chr4:65919167-65919626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 85
               

               
Conread position:
               
4-478
               

               
Cow position:
               
chr4:24002425-24001945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 221
               

               
Conread position:
               
4-478
               

               
Cow position:
               
chr4:28378108-28377639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
4-478
               

               
Cow position:
               
chr4:45644767-45644295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
4-478
               

               
Cow position:
               
chr4:52017302-52016836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 67
               

               
Conread position:
               
4-479
               

               
Cow position:
               
chr4:9445146-9444666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 84
               

               
Conread position:
               
4-479
               

               
Cow position:
               
chr4:16736048-16736522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 6
               

               
Conread position:
               
4-479
               

               
Cow position:
               
chr4:24119367-24118886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 83
               

               
Conread position:
               
4-479
               

               
Cow position:
               
chr4:27276999-27276523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 89
               

               
Conread position:
               
4-479
               

               
Cow position:
               
chr4:28151069-28151542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 89
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr4:16602510-16602037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 83
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr4:41301471-41300971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 103
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr4:53545586-53546050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 142
               

               
Conread position:
               
4-481
               

               
Cow position:
               
chr4:53832595-53833069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 83
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr4:2609783-2610254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 87
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr4:9357909-9358383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
82, 208
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr4:18975954-18975470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr4:19316445-19315981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 184
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr4:22138690-22138198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 83
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr4:26347542-26347059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 218
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr4:47501999-47502489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
52, 227
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr4:51783719-51784204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 69
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:4084905-4084425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:10968819-10968360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:14919558-14920018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 85
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:15623380-15623875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 226
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:17473966-17474464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:25806444-25806924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 102
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:26400501-26400981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 88
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:30973890-30974361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:33097412-33096952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:34166423-34165949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 86
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:34210731-34211193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
346, 73
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:37828279-37827824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
58, 134
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:41441109-41441592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 223
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:44839339-44838867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 88
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:45235329-45234848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
42, 90
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:51903146-51903630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:53125674-53126139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 207
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:58707641-58707154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:58834861-58834378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
4-483
               

               
Cow position:
               
chr4:61897988-61897510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
4-484
               

               
Cow position:
               
chr4:25226474-25226975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 224
               

               
Conread position:
               
4-484
               

               
Cow position:
               
chr4:26874405-26873920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 164
               

               
Conread position:
               
4-484
               

               
Cow position:
               
chr4:35940451-35939981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 88
               

               
Conread position:
               
4-486
               

               
Cow position:
               
chr4:22236931-22236452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
4-494
               

               
Cow position:
               
chr4:29805842-29805333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 94
               

               
Conread position:
               
4-502
               

               
Cow position:
               
chr4:10992664-10992152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
42, 108
               

               
Conread position:
               
4-521
               

               
Cow position:
               
chr4:22051924-22051407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 96
               

               
Conread position:
               
5-172
               

               
Cow position:
               
chr4:67408037-67408206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 83
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr4:2601702-2601874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
64, 85
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr4:52086652-52086835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
5-202
               

               
Cow position:
               
chr4:8674235-8674432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
56, 82
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr4:59643124-59643325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr4:34577119-34577327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
64, 190
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr4:18108334-18108622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 31
               

               
Conread position:
               
5-355
               

               
Cow position:
               
chr4:33366681-33366327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
67, 91
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr4:9795821-9795454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 31
               

               
Conread position:
               
5-413
               

               
Cow position:
               
chr4:57931446-57931871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 83
               

               
Conread position:
               
5-417
               

               
Cow position:
               
chr4:48499369-48499800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
5-482
               

               
Cow position:
               
chr4:25369660-25370137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
5-482
               

               
Cow position:
               
chr4:46743745-46743264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
81, 221
               

               
Conread position:
               
5-482
               

               
Cow position:
               
chr4:68362479-68362948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
5-483
               

               
Cow position:
               
chr4:7501431-7501894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 87
               

               
Conread position:
               
5-483
               

               
Cow position:
               
chr4:27997228-27997712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 83
               

               
Conread position:
               
5-483
               

               
Cow position:
               
chr4:28399858-28399392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 88
               

               
Conread position:
               
5-484
               

               
Cow position:
               
chr4:17877462-17877946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 77
               

               
Conread position:
               
5-488
               

               
Cow position:
               
chr4:9166185-9165699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
67, 164
               

               
Conread position:
               
6-175
               

               
Cow position:
               
chr4:61066178-61066343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
64, 39
               

               
Conread position:
               
6-190
               

               
Cow position:
               
chr4:41866756-41866945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
66, 95
               

               
Conread position:
               
6-204
               

               
Cow position:
               
chr4:50978792-50978997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
6-457
               

               
Cow position:
               
chr4:10916277-10915842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 86
               

               
Conread position:
               
6-467
               

               
Cow position:
               
chr4:16638040-16637595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 93
               

               
Conread position:
               
6-467
               

               
Cow position:
               
chr4:34209581-34210047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 64
               

               
Conread position:
               
6-477
               

               
Cow position:
               
chr4:20139981-20139496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 80
               

               
Conread position:
               
6-479
               

               
Cow position:
               
chr4:9815804-9815326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
6-483
               

               
Cow position:
               
chr4:18096096-18095649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
284, 66
               

               
Conread position:
               
7-479
               

               
Cow position:
               
chr4:65816151-65815686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 47
               

               
Conread position:
               
8-478
               

               
Cow position:
               
chr4:42672719-42673196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
8-478
               

               
Cow position:
               
chr4:61972927-61972443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 190
               

               
Conread position:
               
8-483
               

               
Cow position:
               
chr4:26323290-26323765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 190
               

               
Conread position:
               
9-147
               

               
Cow position:
               
chr4:19598134-19597995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 78
               

               
Conread position:
               
9-261
               

               
Cow position:
               
chr4:3369604-3369864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
53, 221
               

               
Conread position:
               
9-327
               

               
Cow position:
               
chr4:31773016-31773346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
9-333
               

               
Cow position:
               
chr4:56226437-56226765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 86
               

               
Conread position:
               
9-457
               

               
Cow position:
               
chr4:33971346-33970903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 78
               

               
Conread position:
               
10-173
               

               
Cow position:
               
chr4:46549632-46549802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
10-283
               

               
Cow position:
               
chr4:19502253-19501974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 77
               

               
Conread position:
               
10-476
               

               
Cow position:
               
chr4:34383798-34383323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 77
               

               
Conread position:
               
10-479
               

               
Cow position:
               
chr4:27292410-27291931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 91
               

               
Conread position:
               
10-481
               

               
Cow position:
               
chr4:49794226-49794686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 84
               

               
Conread position:
               
10-483
               

               
Cow position:
               
chr4:15904657-15905125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 94
               

               
Conread position:
               
11-190
               

               
Cow position:
               
chr4:53822442-53822624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
11-201
               

               
Cow position:
               
chr4:12260501-12260307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
12-483
               

               
Cow position:
               
chr4:10055759-10056235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 80
               

               
Conread position:
               
12-483
               

               
Cow position:
               
chr4:33433703-33433231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
13-397
               

               
Cow position:
               
chr4:54757761-54757372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 209
               

               
Conread position:
               
15-479
               

               
Cow position:
               
chr4:1014625-1015091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 72
               

               
Conread position:
               
16-474
               

               
Cow position:
               
chr4:14152629-14153111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
17-479
               

               
Cow position:
               
chr4:17379265-17378816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
20-483
               

               
Cow position:
               
chr4:52748895-52748429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 80
               

               
Conread position:
               
23-327
               

               
Cow position:
               
chr4:14131068-14131384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
49, 210
               

               
Conread position:
               
24-480
               

               
Cow position:
               
chr4:12003788-12004240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
25-483
               

               
Cow position:
               
chr4:20485-20937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 142
               

               
Conread position:
               
25-483
               

               
Cow position:
               
chr4:19497682-19497238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 194
               

               
Conread position:
               
25-483
               

               
Cow position:
               
chr4:66256252-66256711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
27-376
               

               
Cow position:
               
chr4:61304859-61304498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
14, 19
               

               
Conread position:
               
27-479
               

               
Cow position:
               
chr4:25889286-25888811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
28-479
               

               
Cow position:
               
chr4:62772369-62771899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
31-483
               

               
Cow position:
               
chr4:10731790-10732248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 115
               

               
Conread position:
               
35-483
               

               
Cow position:
               
chr4:21058816-21058351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 193
               

               
Conread position:
               
38-417
               

               
Cow position:
               
chr4:16239558-16239187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 7
               

               
Conread position:
               
38-478
               

               
Cow position:
               
chr4:5984466-5984026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
42-484
               

               
Cow position:
               
chr4:17833323-17832875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
43-483
               

               
Cow position:
               
chr4:12697221-12697663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
44-437
               

               
Cow position:
               
chr4:49992671-49993052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 44
               

               
Conread position:
               
52-428
               

               
Cow position:
               
chr4:23311666-23311285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
53-475
               

               
Cow position:
               
chr4:65650528-65650115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
53-482
               

               
Cow position:
               
chr4:12591616-12591190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
57-468
               

               
Cow position:
               
chr4:68387392-68387803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
58-416
               

               
Cow position:
               
chr4:43543136-43542775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
59-456
               

               
Cow position:
               
chr4:2422181-2422580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
59-478
               

               
Cow position:
               
chr4:24458501-24458083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 166
               

               
Conread position:
               
64-419
               

               
Cow position:
               
chr4:54501844-54501485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
64-479
               

               
Cow position:
               
chr4:242832-243252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
113, 27
               

               
Conread position:
               
64-479
               

               
Cow position:
               
chr4:32260242-32259824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
64-483
               

               
Cow position:
               
chr4:53208844-53209262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
65-192
               

               
Cow position:
               
chr4:58687856-58687729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
65-480
               

               
Cow position:
               
chr4:1374000-1374384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
65-484
               

               
Cow position:
               
chr4:43866240-43865831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 64
               

               
Conread position:
               
68-489
               

               
Cow position:
               
chr4:11100055-11099637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
70-485
               

               
Cow position:
               
chr4:46477327-46476923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 154
               

               
Conread position:
               
71-477
               

               
Cow position:
               
chr4:58248024-58248424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
74-474
               

               
Cow position:
               
chr4:21392180-21391796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 12
               

               
Conread position:
               
74-479
               

               
Cow position:
               
chr4:69343333-69343724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
75-516
               

               
Cow position:
               
chr4:3991006-3990567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
77-472
               

               
Cow position:
               
chr4:11901941-11901547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 9
               

               
Conread position:
               
86-461
               

               
Cow position:
               
chr4:1915949-1915575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 137
               

               
Conread position:
               
90-404
               

               
Cow position:
               
chr4:7867-7541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 135
               

               
Conread position:
               
90-485
               

               
Cow position:
               
chr4:11671085-11671479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
91-482
               

               
Cow position:
               
chr4:43063933-43064330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
91-483
               

               
Cow position:
               
chr4:7704677-7704300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
84, 136
               

               
Conread position:
               
96-405
               

               
Cow position:
               
chr4:42232306-42232608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
96-472
               

               
Cow position:
               
chr4:480370-479994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 129
               

               
Conread position:
               
100-467
               

               
Cow position:
               
chr4:61215356-61214986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
100-483
               

               
Cow position:
               
chr4:17112237-17111848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 122
               

               
Conread position:
               
100-483
               

               
Cow position:
               
chr4:19313646-19314037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 121
               

               
Conread position:
               
101-483
               

               
Cow position:
               
chr4:24744773-24744381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 126
               

               
Conread position:
               
102-444
               

               
Cow position:
               
chr4:43909414-43909731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
217, 61
               

               
Conread position:
               
103-467
               

               
Cow position:
               
chr4:65731283-65730911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 296
               

               
Conread position:
               
111-482
               

               
Cow position:
               
chr4:44496038-44496397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
111-483
               

               
Cow position:
               
chr4:10905804-10905440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
111-483
               

               
Cow position:
               
chr4:19265225-19265598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 110
               

               
Conread position:
               
112-431
               

               
Cow position:
               
chr4:45574-45896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 97
               

               
Conread position:
               
112-467
               

               
Cow position:
               
chr4:48137567-48137921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 97
               

               
Conread position:
               
112-477
               

               
Cow position:
               
chr4:31023099-31023471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 42
               

               
Conread position:
               
112-483
               

               
Cow position:
               
chr4:44782027-44782399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 113
               

               
Conread position:
               
114-483
               

               
Cow position:
               
chr4:56240191-56239835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 112
               

               
Conread position:
               
118-500
               

               
Cow position:
               
chr4:68076869-68076487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 103
               

               
Conread position:
               
119-467
               

               
Cow position:
               
chr4:68764177-68764530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
58, 107
               

               
Conread position:
               
127-483
               

               
Cow position:
               
chr4:509230-508884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 98
               

               
Conread position:
               
130-483
               

               
Cow position:
               
chr4:34208599-34208962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
44, 94
               

               
Conread position:
               
130-484
               

               
Cow position:
               
chr4:39006629-39006988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
47, 91
               

               
Conread position:
               
131-399
               

               
Cow position:
               
chr4:21064329-21064061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
134-418
               

               
Cow position:
               
chr4:59833610-59833908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
32, 96
               

               
Conread position:
               
136-426
               

               
Cow position:
               
chr4:23060330-23060024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
136-445
               

               
Cow position:
               
chr4:19561372-19561667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 70
               

               
Conread position:
               
136-479
               

               
Cow position:
               
chr4:37935604-37935264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 89
               

               
Conread position:
               
139-483
               

               
Cow position:
               
chr4:19597634-19597299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
143-483
               

               
Cow position:
               
chr4:17660519-17660162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
144-483
               

               
Cow position:
               
chr4:45738794-45738450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 76
               

               
Conread position:
               
146-479
               

               
Cow position:
               
chr4:60371145-60370805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
68, 280
               

               
Conread position:
               
150-476
               

               
Cow position:
               
chr4:49159082-49158767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
125, 37
               

               
Conread position:
               
151-483
               

               
Cow position:
               
chr4:23451404-23451069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
152-479
               

               
Cow position:
               
chr4:45662807-45662490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
153-401
               

               
Cow position:
               
chr4:42267045-42266806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
153-482
               

               
Cow position:
               
chr4:37342812-37343151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
155-479
               

               
Cow position:
               
chr4:49424540-49424847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
161-483
               

               
Cow position:
               
chr4:41867150-41867468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 20
               

               
Conread position:
               
164-467
               

               
Cow position:
               
chr4:54975011-54975305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
24, 63
               

               
Conread position:
               
165-477
               

               
Cow position:
               
chr4:33395978-33395679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
175, 17
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr4:5999480-5999166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr4:47348545-47348854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 53
               

               
Conread position:
               
170-483
               

               
Cow position:
               
chr4:17052884-17052568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
149, 52
               

               
Conread position:
               
172-474
               

               
Cow position:
               
chr4:51727799-51728093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
153, 83
               

               
Conread position:
               
172-481
               

               
Cow position:
               
chr4:39128247-39128565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
172-483
               

               
Cow position:
               
chr4:45775625-45775313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 49
               

               
Conread position:
               
172-483
               

               
Cow position:
               
chr4:56570519-56570831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
173-483
               

               
Cow position:
               
chr4:2893741-2894056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
138, 49
               

               
Conread position:
               
175-483
               

               
Cow position:
               
chr4:54937605-54937917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
176-473
               

               
Cow position:
               
chr4:52167131-52166836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
5, 53
               

               
Conread position:
               
176-483
               

               
Cow position:
               
chr4:31348475-31348161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
5, 47
               

               
Conread position:
               
180-477
               

               
Cow position:
               
chr4:8801227-8801527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
180-483
               

               
Cow position:
               
chr4:203424-203118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 252
               

               
Conread position:
               
180-483
               

               
Cow position:
               
chr4:29237426-29237144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
142, 42
               

               
Conread position:
               
181-411
               

               
Cow position:
               
chr4:25359330-25359566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
181-479
               

               
Cow position:
               
chr4:59785041-59785343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
141, 217
               

               
Conread position:
               
181-483
               

               
Cow position:
               
chr4:5461128-5460836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
181-483
               

               
Cow position:
               
chr4:21874559-21874827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
182-446
               

               
Cow position:
               
chr4:26746210-26746471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 41
               

               
Conread position:
               
182-480
               

               
Cow position:
               
chr4:9845644-9845940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
182-483
               

               
Cow position:
               
chr4:23509313-23509621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
183-483
               

               
Cow position:
               
chr4:58261426-58261125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
111, 35
               

               
Conread position:
               
184-426
               

               
Cow position:
               
chr4:15439325-15439550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
156, 15
               

               
Conread position:
               
184-483
               

               
Cow position:
               
chr4:27529841-27530143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
104, 34
               

               
Conread position:
               
188-461
               

               
Cow position:
               
chr4:43495634-43495900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
137, 30
               

               
Conread position:
               
188-481
               

               
Cow position:
               
chr4:33030293-33030575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
137, 33
               

               
Conread position:
               
188-483
               

               
Cow position:
               
chr4:29291254-29291539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
137, 34
               

               
Conread position:
               
188-483
               

               
Cow position:
               
chr4:46591394-46591692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 32
               

               
Conread position:
               
189-413
               

               
Cow position:
               
chr4:54667958-54667731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
117, 33
               

               
Conread position:
               
190-405
               

               
Cow position:
               
chr4:7213851-7213632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
190-411
               

               
Cow position:
               
chr4:62570549-62570774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
190-457
               

               
Cow position:
               
chr4:19744623-19744887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
190-472
               

               
Cow position:
               
chr4:23847317-23847035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 32
               

               
Conread position:
               
190-477
               

               
Cow position:
               
chr4:8769844-8770121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
126, 28
               

               
Conread position:
               
190-479
               

               
Cow position:
               
chr4:11021917-11021630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
190-481
               

               
Cow position:
               
chr4:46456313-46456042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
143, 28
               

               
Conread position:
               
190-482
               

               
Cow position:
               
chr4:4321272-4320978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
190-482
               

               
Cow position:
               
chr4:22345281-22344996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
190-483
               

               
Cow position:
               
chr4:34630636-34630923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 28
               

               
Conread position:
               
190-483
               

               
Cow position:
               
chr4:54930682-54930394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 28
               

               
Conread position:
               
190-483
               

               
Cow position:
               
chr4:59106077-59105800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
190-484
               

               
Cow position:
               
chr4:44612737-44613031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 33
               

               
Conread position:
               
190-489
               

               
Cow position:
               
chr4:51739969-51739678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
191-472
               

               
Cow position:
               
chr4:46597118-46597393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 27
               

               
Conread position:
               
191-478
               

               
Cow position:
               
chr4:51630392-51630662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
191-482
               

               
Cow position:
               
chr4:35981724-35982020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
192-417
               

               
Cow position:
               
chr4:63349739-63349513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
192-479
               

               
Cow position:
               
chr4:32725960-32726245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 29
               

               
Conread position:
               
192-479
               

               
Cow position:
               
chr4:37691572-37691291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
132, 26
               

               
Conread position:
               
192-480
               

               
Cow position:
               
chr4:22249707-22249423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
112, 26
               

               
Conread position:
               
192-483
               

               
Cow position:
               
chr4:40823379-40823088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
121, 30
               

               
Conread position:
               
192-483
               

               
Cow position:
               
chr4:55395504-55395788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 30
               

               
Conread position:
               
193-477
               

               
Cow position:
               
chr4:66548016-66547749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
131, 29
               

               
Conread position:
               
193-479
               

               
Cow position:
               
chr4:31004667-31004388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
131, 19
               

               
Conread position:
               
193-483
               

               
Cow position:
               
chr4:23445314-23445021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
194-397
               

               
Cow position:
               
chr4:26307762-26307557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
94, 28
               

               
Conread position:
               
194-483
               

               
Cow position:
               
chr4:35869953-35870230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
128, 28
               

               
Conread position:
               
194-483
               

               
Cow position:
               
chr4:47289808-47290103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
100, 28
               

               
Conread position:
               
195-413
               

               
Cow position:
               
chr4:43762780-43763011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
197-483
               

               
Cow position:
               
chr4:21371141-21371416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
197-483
               

               
Cow position:
               
chr4:34310714-34310429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
197-486
               

               
Cow position:
               
chr4:51866735-51867024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
91, 118
               

               
Conread position:
               
197-494
               

               
Cow position:
               
chr4:13435483-13435778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
91, 21
               

               
Conread position:
               
199-445
               

               
Cow position:
               
chr4:657076-656826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
114, 93
               

               
Conread position:
               
199-480
               

               
Cow position:
               
chr4:45583385-45583097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
199-483
               

               
Cow position:
               
chr4:3837022-3837299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
199-483
               

               
Cow position:
               
chr4:45367479-45367764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
126, 19
               

               
Conread position:
               
199-484
               

               
Cow position:
               
chr4:11897556-11897269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 21
               

               
Conread position:
               
200-477
               

               
Cow position:
               
chr4:20157669-20157395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
121, 66
               

               
Conread position:
               
201-460
               

               
Cow position:
               
chr4:49089539-49089793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
201-483
               

               
Cow position:
               
chr4:12676558-12676828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 17
               

               
Conread position:
               
205-480
               

               
Cow position:
               
chr4:56590780-56591064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
81, 24
               

               
Conread position:
               
209-486
               

               
Cow position:
               
chr4:41186153-41185882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
210-421
               

               
Cow position:
               
chr4:53447912-53447701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
115, 12
               

               
Conread position:
               
211-465
               

               
Cow position:
               
chr4:46370565-46370832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
211-473
               

               
Cow position:
               
chr4:65538654-65538402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
128, 72
               

               
Conread position:
               
213-480
               

               
Cow position:
               
chr4:37502578-37502839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
218-480
               

               
Cow position:
               
chr4:21258977-21259240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
103, 131
               

               
Conread position:
               
218-480
               

               
Cow position:
               
chr4:21365165-21365431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
222-391
               

               
Cow position:
               
chr4:13871694-13871854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
222-417
               

               
Cow position:
               
chr4:23911824-23911622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
222-467
               

               
Cow position:
               
chr4:63813537-63813301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
94, 66
               

               
Conread position:
               
222-483
               

               
Cow position:
               
chr4:12127878-12127614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
65, 87
               

               
Conread position:
               
223-483
               

               
Cow position:
               
chr4:2601995-2602260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
225-487
               

               
Cow position:
               
chr4:43750044-43749784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 186
               

               
Conread position:
               
227-475
               

               
Cow position:
               
chr4:13222406-13222168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
96, 102
               

               
Conread position:
               
227-483
               

               
Cow position:
               
chr4:41602618-41602874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 151
               

               
Conread position:
               
228-466
               

               
Cow position:
               
chr4:22860935-22860701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
186, 74
               

               
Conread position:
               
229-417
               

               
Cow position:
               
chr4:11004947-11004758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 58
               

               
Conread position:
               
229-481
               

               
Cow position:
               
chr4:13255865-13256109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
230-479
               

               
Cow position:
               
chr4:21517232-21516982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
67, 77
               

               
Conread position:
               
231-483
               

               
Cow position:
               
chr4:10999930-10999690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
101, 137
               

               
Conread position:
               
233-483
               

               
Cow position:
               
chr4:16762956-16762701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
55, 123
               

               
Conread position:
               
236-459
               

               
Cow position:
               
chr4:37465805-37465595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
236-472
               

               
Cow position:
               
chr4:27687702-27687941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
236-479
               

               
Cow position:
               
chr4:44973421-44973656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
116, 66
               

               
Conread position:
               
238-458
               

               
Cow position:
               
chr4:36724823-36725041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
240-466
               

               
Cow position:
               
chr4:69385890-69386095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
244-479
               

               
Cow position:
               
chr4:13974185-13973949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
52, 159
               

               
Conread position:
               
247-425
               

               
Cow position:
               
chr4:66118737-66118552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
247-483
               

               
Cow position:
               
chr4:9681091-9681331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
77, 54
               

               
Conread position:
               
247-483
               

               
Cow position:
               
chr4:48321818-48322058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
247-484
               

               
Cow position:
               
chr4:13941248-13941486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
14, 119
               

               
Conread position:
               
248-483
               

               
Cow position:
               
chr4:31506239-31505999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
75, 12
               

               
Conread position:
               
248-483
               

               
Cow position:
               
chr4:36929104-36929341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
46, 173
               

               
Conread position:
               
250-484
               

               
Cow position:
               
chr4:13284169-13284410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
50, 113
               

               
Conread position:
               
251-483
               

               
Cow position:
               
chr4:51768906-51769131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
71, 103
               

               
Conread position:
               
252-483
               

               
Cow position:
               
chr4:16593878-16594107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
69, 88
               

               
Conread position:
               
253-483
               

               
Cow position:
               
chr4:28543805-28543587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 118
               

               
Conread position:
               
255-417
               

               
Cow position:
               
chr4:20842718-20842885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 96
               

               
Conread position:
               
255-477
               

               
Cow position:
               
chr4:22713696-22713474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
255-483
               

               
Cow position:
               
chr4:13344339-13344563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
259-479
               

               
Cow position:
               
chr4:19408198-19407976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
259-483
               

               
Cow position:
               
chr4:43515524-43515744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 162
               

               
Conread position:
               
260-483
               

               
Cow position:
               
chr4:65175341-65175120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
10, 113
               

               
Conread position:
               
268-474
               

               
Cow position:
               
chr4:61148400-61148622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
269-483
               

               
Cow position:
               
chr4:34369641-34369425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
271-473
               

               
Cow position:
               
chr4:33869474-33869670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 110
               

               
Conread position:
               
272-483
               

               
Cow position:
               
chr4:45711184-45711388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 114
               

               
Conread position:
               
274-483
               

               
Cow position:
               
chr4:44676009-44676220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 105
               

               
Conread position:
               
277-467
               

               
Cow position:
               
chr4:45483257-45483453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
282-473
               

               
Cow position:
               
chr4:20147010-20147198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
24, 135
               

               
Conread position:
               
282-480
               

               
Cow position:
               
chr4:38705946-38705747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
8, 34
               

               
Conread position:
               
282-481
               

               
Cow position:
               
chr4:54851295-54851095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
38, 128
               

               
Conread position:
               
283-483
               

               
Cow position:
               
chr4:2885718-2885515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 136
               

               
Conread position:
               
284-474
               

               
Cow position:
               
chr4:16881536-16881349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 133
               

               
Conread position:
               
285-479
               

               
Cow position:
               
chr4:27632281-27632468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
288-483
               

               
Cow position:
               
chr4:41371109-41370916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
38, 145
               

               
Conread position:
               
288-483
               

               
Cow position:
               
chr4:46720333-46720142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 135
               

               
Conread position:
               
288-483
               

               
Cow position:
               
chr4:52823573-52823388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
291-483
               

               
Cow position:
               
chr4:19501250-19501067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
298-483
               

               
Cow position:
               
chr4:48172981-48173161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
299-483
               

               
Cow position:
               
chr4:59377756-59377934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
21, 92
               

               
Conread position:
               
301-483
               

               
Cow position:
               
chr4:53346170-53346351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
305-483
               

               
Cow position:
               
chr4:61313360-61313188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
318-467
               

               
Cow position:
               
chr4:5047475-5047331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
318-478
               

               
Cow position:
               
chr4:26011715-26011870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
318-481
               

               
Cow position:
               
chr4:54524467-54524316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
318-482
               

               
Cow position:
               
chr4:18756296-18756458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
95, 77
               

               
Conread position:
               
318-483
               

               
Cow position:
               
chr4:52307749-52307597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
318-503
               

               
Cow position:
               
chr4:37313033-37313215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
165, 27
               

               
Conread position:
               
319-482
               

               
Cow position:
               
chr4:52779716-52779874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
325-483
               

               
Cow position:
               
chr4:55508370-55508222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 28
               

               
Conread position:
               
327-473
               

               
Cow position:
               
chr4:30929473-30929617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
327-479
               

               
Cow position:
               
chr4:12473723-12473870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 8
               

               
Conread position:
               
328-483
               

               
Cow position:
               
chr4:45636037-45636191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
329-483
               

               
Cow position:
               
chr4:45013289-45013141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
331-477
               

               
Cow position:
               
chr4:13026176-13026323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 93
               

               
Conread position:
               
331-481
               

               
Cow position:
               
chr4:45073940-45074086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 64
               

               
Conread position:
               
331-483
               

               
Cow position:
               
chr4:65950531-65950680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
331-491
               

               
Cow position:
               
chr4:34700162-34699997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
337-476
               

               
Cow position:
               
chr4:42253246-42253110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
337-483
               

               
Cow position:
               
chr4:51729837-51729975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
337-484
               

               
Cow position:
               
chr4:22546956-22546815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
338-501
               

               
Cow position:
               
chr4:46494179-46494336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
340-481
               

               
Cow position:
               
chr4:18107273-18107135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
340-481
               

               
Cow position:
               
chr4:37675500-37675640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
340-482
               

               
Cow position:
               
chr4:60215570-60215430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
137, 38
               

               
Conread position:
               
341-483
               

               
Cow position:
               
chr4:17084455-17084313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
345-458
               

               
Cow position:
               
chr4:26683565-26683674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
345-483
               

               
Cow position:
               
chr4:45596140-45596007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
346-478
               

               
Cow position:
               
chr4:61066665-61066796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
81, 69
               

               
Conread position:
               
369-483
               

               
Cow position:
               
chr4:19102971-19102857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 57
               

               
Conread position:
               
369-483
               

               
Cow position:
               
chr4:64657382-64657266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               
Show alignments to all cow chromosomes.