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Cow genome map

           
Conread name:
           
Pig4-TMW8016J06
        

               
Conread position:
               
1-232
               

               
Cow position:
               
chr15:29542401-29542171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 143
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr15:18605785-18605555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr15:16583308-16583541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr15:20534046-20534288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 61
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr15:38683604-38683373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr15:16616597-16616361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 29
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr15:363418-363179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr15:40999648-40999912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
28, 33
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr15:45245146-45245386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
80, 111
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr15:45479411-45479159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 144
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr15:28924365-28924614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr15:30820419-30820687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
47, 146
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr15:30982318-30982074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:3051749-3051498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:4485548-4485289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 132
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:4918655-4918918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
199, 37
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:13387485-13387228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
85, 66
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:15041030-15041286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
85, 149
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:16112806-16112548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 54
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:17869890-17870137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 139
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:18720718-18720458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 210
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:19119213-19119456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:22938932-22939176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:26911677-26911928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:27281266-27281016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:35838682-35838941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 133
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:43030618-43030879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 114
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:46611322-46611075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:51822546-51822290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 103
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr15:37382026-37381769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr15:23798118-23798386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 42
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr15:5498625-5498897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 148
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr15:21832020-21832292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 148
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr15:30985393-30985652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
172, 85
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr15:42143254-42142994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr15:44641301-44641032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
159, 147
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr15:53101992-53101723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 93
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr15:33285274-33285012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:5234601-5234869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 147
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr15:1329702-1329971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 46
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr15:9871011-9871282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
159, 34
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr15:19403379-19403112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 56
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr15:20352243-20351962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 218
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr15:20458896-20459173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 148
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr15:23180823-23180568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr15:24616967-24616703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
86, 72
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr15:33976289-33976551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 147
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr15:47990358-47990634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 186
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr15:51632641-51632906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
75, 149
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr15:52778131-52778397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
28, 63
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr15:143830-144107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr15:33314043-33314320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 111
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr15:44256881-44256606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 143
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr15:50957391-50957676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
93, 175
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr15:21388768-21389020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 36
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr15:52380693-52380441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr15:33605323-33605079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 92
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr15:16640185-16639937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 207
               

               
Conread position:
               
3-261
               

               
Cow position:
               
chr15:13515771-13515520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 83
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr15:6530436-6530699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
36, 199
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr15:8428407-8428162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 104
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr15:9267661-9267904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 146
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr15:23486771-23487019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
78, 127
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr15:43626860-43626603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr15:6082241-6082511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 46
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr15:10456598-10456884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr15:15707717-15707982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr15:30047134-30047414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 210
               

               
Conread position:
               
3-286
               

               
Cow position:
               
chr15:32979632-32979916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 199
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr15:10336152-10335905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr15:24968188-24967938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
77, 95
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr15:22532639-22532366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 37
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr15:24044691-24044970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
52, 174
               

               
Conread position:
               
5-251
               

               
Cow position:
               
chr15:18284642-18284398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 207
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr15:52739725-52739976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr15:5571236-5571506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 145
               

               
Conread position:
               
7-248
               

               
Cow position:
               
chr15:41418413-41418667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
49, 175
               

               
Conread position:
               
8-255
               

               
Cow position:
               
chr15:17084606-17084365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
8-264
               

               
Cow position:
               
chr15:7430376-7430125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
10-264
               

               
Cow position:
               
chr15:15881318-15881077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
143, 52
               

               
Conread position:
               
13-262
               

               
Cow position:
               
chr15:41583308-41583061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
47, 142
               

               
Conread position:
               
13-278
               

               
Cow position:
               
chr15:16936471-16936712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
252, 35
               

               
Conread position:
               
13-278
               

               
Cow position:
               
chr15:53680378-53680632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
68, 46
               

               
Conread position:
               
14-264
               

               
Cow position:
               
chr15:20370079-20370308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
15-266
               

               
Cow position:
               
chr15:36621809-36621559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 160
               

               
Conread position:
               
15-281
               

               
Cow position:
               
chr15:28126659-28126918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
72, 130
               

               
Conread position:
               
21-263
               

               
Cow position:
               
chr15:6045931-6046165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
21-278
               

               
Cow position:
               
chr15:24129031-24128782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
22-274
               

               
Cow position:
               
chr15:38806116-38806368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
131, 65
               

               
Conread position:
               
23-266
               

               
Cow position:
               
chr15:24797433-24797664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
141, 19
               

               
Conread position:
               
24-247
               

               
Cow position:
               
chr15:26404650-26404440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
58, 123
               

               
Conread position:
               
27-278
               

               
Cow position:
               
chr15:16307794-16307545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 183
               

               
Conread position:
               
28-278
               

               
Cow position:
               
chr15:35417245-35417496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
31-249
               

               
Cow position:
               
chr15:8978774-8978563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
55, 115
               

               
Conread position:
               
35-253
               

               
Cow position:
               
chr15:52454815-52454601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
51, 175
               

               
Conread position:
               
35-281
               

               
Cow position:
               
chr15:24941016-24941248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
46, 109
               

               
Conread position:
               
35-281
               

               
Cow position:
               
chr15:51898595-51898358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 59
               

               
Conread position:
               
36-274
               

               
Cow position:
               
chr15:11362809-11363042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
19, 118
               

               
Conread position:
               
36-278
               

               
Cow position:
               
chr15:20725248-20725486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
36-278
               

               
Cow position:
               
chr15:50322965-50322727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
43, 114
               

               
Conread position:
               
39-282
               

               
Cow position:
               
chr15:44051133-44051371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
40-255
               

               
Cow position:
               
chr15:37716558-37716773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
108, 60
               

               
Conread position:
               
42-264
               

               
Cow position:
               
chr15:35642382-35642167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
42-281
               

               
Cow position:
               
chr15:43913721-43913962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 171
               

               
Conread position:
               
43-278
               

               
Cow position:
               
chr15:38846459-38846235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
5, 105
               

               
Conread position:
               
43-281
               

               
Cow position:
               
chr15:51427460-51427695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
5, 107
               

               
Conread position:
               
47-258
               

               
Cow position:
               
chr15:241206-240996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
33, 166
               

               
Conread position:
               
48-264
               

               
Cow position:
               
chr15:33303690-33303477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
48-264
               

               
Cow position:
               
chr15:40009293-40009502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
48-264
               

               
Cow position:
               
chr15:40343607-40343397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
48-274
               

               
Cow position:
               
chr15:16927727-16927961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
50-278
               

               
Cow position:
               
chr15:27972860-27973086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 100
               

               
Conread position:
               
51-264
               

               
Cow position:
               
chr15:9062240-9062448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
30, 162
               

               
Conread position:
               
51-264
               

               
Cow position:
               
chr15:37931415-37931613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
51-278
               

               
Cow position:
               
chr15:36781982-36782194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
218, 26
               

               
Conread position:
               
53-228
               

               
Cow position:
               
chr15:53231817-53231643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
53-246
               

               
Cow position:
               
chr15:31085886-31085702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
53-264
               

               
Cow position:
               
chr15:17100364-17100562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
53-264
               

               
Cow position:
               
chr15:19771479-19771280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
53-264
               

               
Cow position:
               
chr15:38883509-38883300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 159
               

               
Conread position:
               
53-265
               

               
Cow position:
               
chr15:4535259-4535058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
33, 96
               

               
Conread position:
               
53-274
               

               
Cow position:
               
chr15:1083028-1083240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 37
               

               
Conread position:
               
53-274
               

               
Cow position:
               
chr15:14020823-14020608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
53-278
               

               
Cow position:
               
chr15:15573470-15573699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
55-264
               

               
Cow position:
               
chr15:23767915-23768116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
55-278
               

               
Cow position:
               
chr15:14856134-14856335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
55-278
               

               
Cow position:
               
chr15:21894132-21893913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
55-278
               

               
Cow position:
               
chr15:45323133-45322919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
209, 93
               

               
Conread position:
               
56-244
               

               
Cow position:
               
chr15:12063679-12063496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
24, 92
               

               
Conread position:
               
57-264
               

               
Cow position:
               
chr15:11658217-11658420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
29, 137
               

               
Conread position:
               
57-264
               

               
Cow position:
               
chr15:50341456-50341269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
57-278
               

               
Cow position:
               
chr15:6462154-6462366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 88
               

               
Conread position:
               
58-249
               

               
Cow position:
               
chr15:39406081-39405893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
95, 153
               

               
Conread position:
               
58-263
               

               
Cow position:
               
chr15:12723425-12723236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
59-258
               

               
Cow position:
               
chr15:33525775-33525571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 160
               

               
Conread position:
               
59-264
               

               
Cow position:
               
chr15:50302532-50302332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
61-261
               

               
Cow position:
               
chr15:6586369-6586565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
20, 149
               

               
Conread position:
               
61-264
               

               
Cow position:
               
chr15:2144788-2144982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
61-278
               

               
Cow position:
               
chr15:29792568-29792778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
64-278
               

               
Cow position:
               
chr15:39621679-39621472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
65-264
               

               
Cow position:
               
chr15:39599780-39599590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
65-278
               

               
Cow position:
               
chr15:29810449-29810250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
65-278
               

               
Cow position:
               
chr15:47822140-47821941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
5, 36
               

               
Conread position:
               
66-278
               

               
Cow position:
               
chr15:10245670-10245873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
198, 20
               

               
Conread position:
               
67-281
               

               
Cow position:
               
chr15:31857930-31857717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
17, 143
               

               
Conread position:
               
68-278
               

               
Cow position:
               
chr15:21523127-21522918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
71-263
               

               
Cow position:
               
chr15:26158284-26158467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
72-266
               

               
Cow position:
               
chr15:21421274-21421086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
73-264
               

               
Cow position:
               
chr15:5633004-5632831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 68
               

               
Conread position:
               
73-281
               

               
Cow position:
               
chr15:22938445-22938634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
79-274
               

               
Cow position:
               
chr15:225477-225667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
79-278
               

               
Cow position:
               
chr15:26903520-26903328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 70
               

               
Conread position:
               
79-281
               

               
Cow position:
               
chr15:38394745-38394546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
184, 66
               

               
Conread position:
               
80-253
               

               
Cow position:
               
chr15:4501304-4501136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
80-264
               

               
Cow position:
               
chr15:12304965-12304790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
80-264
               

               
Cow position:
               
chr15:45217144-45216969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 94
               

               
Conread position:
               
81-264
               

               
Cow position:
               
chr15:8007306-8007127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
81-281
               

               
Cow position:
               
chr15:26573711-26573506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
82-264
               

               
Cow position:
               
chr15:39598560-39598391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
85-278
               

               
Cow position:
               
chr15:11995706-11995895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
179, 66
               

               
Conread position:
               
88-255
               

               
Cow position:
               
chr15:20082076-20081914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
60, 121
               

               
Conread position:
               
90-278
               

               
Cow position:
               
chr15:10846036-10845851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
174, 58
               

               
Conread position:
               
99-251
               

               
Cow position:
               
chr15:6168210-6168360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
54, 113
               

               
Conread position:
               
100-277
               

               
Cow position:
               
chr15:14740367-14740551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
103-264
               

               
Cow position:
               
chr15:26918972-26919127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 105
               

               
Conread position:
               
108-258
               

               
Cow position:
               
chr15:9526172-9526321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
108-264
               

               
Cow position:
               
chr15:1804032-1804187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
108-278
               

               
Cow position:
               
chr15:36347065-36346891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
111-278
               

               
Cow position:
               
chr15:34144862-34145024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
155, 33
               

               
Conread position:
               
115-264
               

               
Cow position:
               
chr15:21821631-21821777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
38, 97
               

               
Conread position:
               
116-278
               

               
Cow position:
               
chr15:36773406-36773568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
122-264
               

               
Cow position:
               
chr15:4861628-4861767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 89
               

               
Conread position:
               
156-278
               

               
Cow position:
               
chr15:23927219-23927339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
166-264
               

               
Cow position:
               
chr15:22930099-22930196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               
Show alignments to all cow chromosomes.