Cow genome map
| Conread name: | Pig4-TMW8016J06 |
| Conread position: | 1-242 |
| Cow position: | chr18:46881030-46880789 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 213 |
| Conread position: | 1-248 |
| Cow position: | chr18:11322242-11322495 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-251 |
| Cow position: | chr18:9007802-9008037 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 84, 112 |
| Conread position: | 1-251 |
| Cow position: | chr18:34621711-34621465 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 88 |
| Conread position: | 1-251 |
| Cow position: | chr18:50637807-50637564 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 86, 42 |
| Conread position: | 1-252 |
| Cow position: | chr18:33793357-33793603 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 75, 152 |
| Conread position: | 1-254 |
| Cow position: | chr18:6290437-6290685 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 117 |
| Conread position: | 1-254 |
| Cow position: | chr18:54646144-54646377 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1-255 |
| Cow position: | chr18:35012653-35012409 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 85, 147 |
| Conread position: | 1-256 |
| Cow position: | chr18:13172872-13172616 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 214 |
| Conread position: | 1-256 |
| Cow position: | chr18:18627674-18627422 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 86, 210 |
| Conread position: | 1-256 |
| Cow position: | chr18:21721627-21721377 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 148 |
| Conread position: | 1-256 |
| Cow position: | chr18:22065708-22065453 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 147, 58 |
| Conread position: | 1-256 |
| Cow position: | chr18:33407275-33407515 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 152, 48 |
| Conread position: | 1-256 |
| Cow position: | chr18:55782773-55782518 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 81, 213 |
| Conread position: | 1-263 |
| Cow position: | chr18:5190026-5189781 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1-263 |
| Cow position: | chr18:7947028-7947295 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 205 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 88, 154 |
| Conread position: | 1-263 |
| Cow position: | chr18:10861763-10861524 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 212, 42 |
| Conread position: | 1-264 |
| Cow position: | chr18:3180073-3180328 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 1-264 |
| Cow position: | chr18:7955801-7956051 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-264 |
| Cow position: | chr18:11867006-11867248 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 26, 30 |
| Conread position: | 1-264 |
| Cow position: | chr18:12118192-12117934 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 85, 210 |
| Conread position: | 1-264 |
| Cow position: | chr18:27388207-27388461 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 1-264 |
| Cow position: | chr18:29356984-29356719 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 42, 19 |
| Conread position: | 1-264 |
| Cow position: | chr18:29371520-29371776 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 51, 105 |
| Conread position: | 1-264 |
| Cow position: | chr18:35057997-35058247 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 156, 46 |
| Conread position: | 1-264 |
| Cow position: | chr18:36458587-36458841 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 148 |
| Conread position: | 1-264 |
| Cow position: | chr18:37023903-37023645 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 208 |
| Conread position: | 1-264 |
| Cow position: | chr18:43284098-43283850 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-264 |
| Cow position: | chr18:49161803-49161535 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 1-264 |
| Cow position: | chr18:55505057-55505315 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 121, 35 |
| Conread position: | 1-264 |
| Cow position: | chr18:55552618-55552880 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 158 |
| Conread position: | 1-264 |
| Cow position: | chr18:56159112-56159369 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 20, 117 |
| Conread position: | 1-265 |
| Cow position: | chr18:23447425-23447172 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 1-269 |
| Cow position: | chr18:55701992-55701737 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 80, 29 |
| Conread position: | 1-274 |
| Cow position: | chr18:2099698-2099428 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 80, 32 |
| Conread position: | 1-274 |
| Cow position: | chr18:41270740-41271009 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 212 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 63, 71 |
| Conread position: | 1-278 |
| Cow position: | chr18:3209374-3209638 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 42 |
| Conread position: | 1-278 |
| Cow position: | chr18:9818493-9818763 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 263, 39 |
| Conread position: | 1-278 |
| Cow position: | chr18:16045347-16045077 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 83, 156 |
| Conread position: | 1-278 |
| Cow position: | chr18:16418040-16417778 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 152, 40 |
| Conread position: | 1-278 |
| Cow position: | chr18:17004907-17005182 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 29 |
| Conread position: | 1-278 |
| Cow position: | chr18:19850091-19849831 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 263, 54 |
| Conread position: | 1-278 |
| Cow position: | chr18:20174477-20174204 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 148 |
| Conread position: | 1-278 |
| Cow position: | chr18:24022044-24022301 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 1-278 |
| Cow position: | chr18:24342279-24342542 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 22 |
| Conread position: | 1-278 |
| Cow position: | chr18:26286566-26286835 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 135, 85 |
| Conread position: | 1-278 |
| Cow position: | chr18:29796780-29796500 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 17, 39 |
| Conread position: | 1-278 |
| Cow position: | chr18:33606283-33606556 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 82 |
| Conread position: | 1-278 |
| Cow position: | chr18:39662430-39662704 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 44, 138 |
| Conread position: | 1-278 |
| Cow position: | chr18:42747240-42747517 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 131 |
| Conread position: | 1-278 |
| Cow position: | chr18:45104793-45104520 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 136, 206 |
| Conread position: | 1-278 |
| Cow position: | chr18:52635428-52635154 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 102 |
| Conread position: | 1-281 |
| Cow position: | chr18:39002142-39001874 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 213 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 85, 125 |
| Conread position: | 1-282 |
| Cow position: | chr18:22121227-22120952 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 54 |
| Conread position: | 1-284 |
| Cow position: | chr18:20998961-20998688 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 152, 76 |
| Conread position: | 2-255 |
| Cow position: | chr18:7930489-7930241 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 173, 91 |
| Conread position: | 2-264 |
| Cow position: | chr18:4315953-4316219 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 149 |
| Conread position: | 2-265 |
| Cow position: | chr18:51406238-51406000 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 79, 17 |
| Conread position: | 2-281 |
| Cow position: | chr18:35636693-35636420 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 39 |
| Conread position: | 3-245 |
| Cow position: | chr18:11811632-11811865 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 48, 111 |
| Conread position: | 3-246 |
| Cow position: | chr18:45395648-45395896 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 184 |
| Conread position: | 3-249 |
| Cow position: | chr18:4749226-4748982 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 79, 52 |
| Conread position: | 3-255 |
| Cow position: | chr18:11618137-11618377 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 134, 90 |
| Conread position: | 3-255 |
| Cow position: | chr18:18562883-18562636 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 84, 145 |
| Conread position: | 3-255 |
| Cow position: | chr18:37002287-37002532 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 84, 11 |
| Conread position: | 3-255 |
| Cow position: | chr18:45904237-45903995 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 83, 153 |
| Conread position: | 3-256 |
| Cow position: | chr18:13293164-13293410 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 177 |
| Conread position: | 3-256 |
| Cow position: | chr18:47183630-47183383 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 197 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 3-261 |
| Cow position: | chr18:15881199-15880953 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 91, 38 |
| Conread position: | 3-263 |
| Cow position: | chr18:51713054-51712794 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 226 |
| Conread position: | 3-264 |
| Cow position: | chr18:3098657-3098410 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 187, 69 |
| Conread position: | 3-264 |
| Cow position: | chr18:28101281-28101539 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 208 |
| Conread position: | 3-264 |
| Cow position: | chr18:55396972-55397213 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 81, 38 |
| Conread position: | 3-274 |
| Cow position: | chr18:4624774-4624510 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 141 |
| Conread position: | 4-264 |
| Cow position: | chr18:4666552-4666304 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 199 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 168, 46 |
| Conread position: | 4-281 |
| Cow position: | chr18:29058836-29058566 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 149, 37 |
| Conread position: | 5-255 |
| Cow position: | chr18:56172363-56172117 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 77, 168 |
| Conread position: | 5-264 |
| Cow position: | chr18:16044493-16044244 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 80, 28 |
| Conread position: | 5-264 |
| Cow position: | chr18:20125963-20126213 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 148, 36 |
| Conread position: | 5-264 |
| Cow position: | chr18:56150999-56150742 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 76, 153 |
| Conread position: | 5-278 |
| Cow position: | chr18:47314641-47314364 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 201 |
| Conread position: | 7-262 |
| Cow position: | chr18:31672844-31672604 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 80, 66 |
| Conread position: | 7-265 |
| Cow position: | chr18:23766763-23766504 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 47, 120 |
| Conread position: | 7-278 |
| Cow position: | chr18:7950772-7951037 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 80, 177 |
| Conread position: | 8-256 |
| Cow position: | chr18:8105283-8105046 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 73, 106 |
| Conread position: | 14-256 |
| Cow position: | chr18:56168251-56168019 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 67, 39 |
| Conread position: | 14-281 |
| Cow position: | chr18:43065178-43065455 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 27 |
| Conread position: | 17-264 |
| Cow position: | chr18:238675-238435 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 64, 120 |
| Conread position: | 19-278 |
| Cow position: | chr18:52637863-52637595 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 37, 200 |
| Conread position: | 24-264 |
| Cow position: | chr18:36445108-36445347 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 130 |
| Conread position: | 30-278 |
| Cow position: | chr18:13359748-13359989 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 31-264 |
| Cow position: | chr18:52382380-52382607 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 15, 109 |
| Conread position: | 32-248 |
| Cow position: | chr18:1733507-1733301 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 35-244 |
| Cow position: | chr18:15025364-15025562 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 26, 110 |
| Conread position: | 36-265 |
| Cow position: | chr18:4625589-4625805 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 117, 8 |
| Conread position: | 36-278 |
| Cow position: | chr18:35827726-35827485 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 38-266 |
| Cow position: | chr18:26998554-26998790 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 49, 228 |
| Conread position: | 38-274 |
| Cow position: | chr18:43823263-43823029 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 43, 175 |
| Conread position: | 39-256 |
| Cow position: | chr18:44549216-44549015 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 110 |
| Conread position: | 45-264 |
| Cow position: | chr18:4858212-4857995 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 31 |
| Conread position: | 47-264 |
| Cow position: | chr18:3115159-3115371 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 47-278 |
| Cow position: | chr18:39875561-39875334 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 16, 79 |
| Conread position: | 48-278 |
| Cow position: | chr18:46048459-46048684 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 103 |
| Conread position: | 48-281 |
| Cow position: | chr18:19143816-19143584 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 105, 75 |
| Conread position: | 49-277 |
| Cow position: | chr18:28924131-28923914 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 49-278 |
| Cow position: | chr18:48453395-48453613 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 49-281 |
| Cow position: | chr18:56183639-56183867 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 50-281 |
| Cow position: | chr18:45572811-45573036 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 45 |
| Conread position: | 51-249 |
| Cow position: | chr18:52632702-52632508 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 30, 161 |
| Conread position: | 51-264 |
| Cow position: | chr18:11166682-11166888 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 98 |
| Conread position: | 51-278 |
| Cow position: | chr18:23808170-23807948 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 35, 97 |
| Conread position: | 52-274 |
| Cow position: | chr18:1144489-1144265 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 96, 51 |
| Conread position: | 53-249 |
| Cow position: | chr18:3422425-3422614 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 33, 95 |
| Conread position: | 53-264 |
| Cow position: | chr18:5646955-5647156 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 53-264 |
| Cow position: | chr18:11680425-11680632 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 33, 157 |
| Conread position: | 53-264 |
| Cow position: | chr18:30341458-30341266 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 55 |
| Conread position: | 53-264 |
| Cow position: | chr18:42479874-42479680 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 99, 5 |
| Conread position: | 53-281 |
| Cow position: | chr18:25647544-25647324 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 207, 96 |
| Conread position: | 54-264 |
| Cow position: | chr18:47931154-47930957 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 96 |
| Conread position: | 55-263 |
| Cow position: | chr18:55789285-55789084 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 26, 117 |
| Conread position: | 55-264 |
| Cow position: | chr18:16847405-16847600 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 31, 66 |
| Conread position: | 55-264 |
| Cow position: | chr18:39115437-39115231 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 26, 156 |
| Conread position: | 57-255 |
| Cow position: | chr18:46453170-46452976 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 29, 109 |
| Conread position: | 57-255 |
| Cow position: | chr18:47517499-47517312 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 57-258 |
| Cow position: | chr18:5995181-5995369 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 24, 54 |
| Conread position: | 57-258 |
| Cow position: | chr18:21266217-21266418 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 23, 67 |
| Conread position: | 57-274 |
| Cow position: | chr18:18919244-18919036 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 57-278 |
| Cow position: | chr18:268102-267892 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 58-256 |
| Cow position: | chr18:38985397-38985591 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 28, 152 |
| Conread position: | 58-266 |
| Cow position: | chr18:31586654-31586459 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 59-278 |
| Cow position: | chr18:55498777-55498993 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 151, 27 |
| Conread position: | 60-264 |
| Cow position: | chr18:25282843-25282645 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 21, 91 |
| Conread position: | 65-264 |
| Cow position: | chr18:2592456-2592260 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 21, 83 |
| Conread position: | 66-255 |
| Cow position: | chr18:5247801-5247608 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 66-264 |
| Cow position: | chr18:51656335-51656136 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 20, 149 |
| Conread position: | 66-281 |
| Cow position: | chr18:24946093-24945880 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 82, 39 |
| Conread position: | 69-261 |
| Cow position: | chr18:11691689-11691503 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 79, 16 |
| Conread position: | 74-264 |
| Cow position: | chr18:21768354-21768539 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 79, 106 |
| Conread position: | 79-264 |
| Cow position: | chr18:1582543-1582371 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 74, 30 |
| Conread position: | 79-278 |
| Cow position: | chr18:37382366-37382168 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 74, 131 |
| Conread position: | 80-255 |
| Cow position: | chr18:30794167-30794333 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 80-265 |
| Cow position: | chr18:5711934-5711758 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 81-264 |
| Cow position: | chr18:2480376-2480565 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 97 |
| Conread position: | 82-258 |
| Cow position: | chr18:7952381-7952552 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 66, 89 |
| Conread position: | 83-264 |
| Cow position: | chr18:10322536-10322714 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 65, 128 |
| Conread position: | 85-277 |
| Cow position: | chr18:35582364-35582177 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 97, 63 |
| Conread position: | 87-256 |
| Cow position: | chr18:12023893-12023735 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 88-258 |
| Cow position: | chr18:56192849-56192689 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 99-264 |
| Cow position: | chr18:32883053-32883214 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 111 |
| Conread position: | 103-269 |
| Cow position: | chr18:35908379-35908539 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 160, 36 |
| Conread position: | 108-264 |
| Cow position: | chr18:28823208-28823059 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 110-256 |
| Cow position: | chr18:4628795-4628935 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 112-278 |
| Cow position: | chr18:14872101-14871944 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 152, 36 |
| Conread position: | 115-264 |
| Cow position: | chr18:219100-219242 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 114, 33 |
| Conread position: | 115-264 |
| Cow position: | chr18:48829019-48828873 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 41, 96 |
| Conread position: | 120-278 |
| Cow position: | chr18:51392873-51392716 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 94 |
| Conread position: | 124-248 |
| Cow position: | chr18:2619420-2619300 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 124-264 |
| Cow position: | chr18:2864222-2864087 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 126-266 |
| Cow position: | chr18:29188788-29188922 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 126-278 |
| Cow position: | chr18:3211647-3211797 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 151-264 |
| Cow position: | chr18:858610-858727 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 151-278 |
| Cow position: | chr18:18815876-18815748 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 113, 48 |
Show alignments to all cow chromosomes.