Cow genome map

Conread name: Pig4-TMW8016J06

Conread position: 1-241
Cow position: chr26:30752162-30751928 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 144

Conread position: 1-255
Cow position: chr26:6475724-6475482 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 171, 37

Conread position: 1-256
Cow position: chr26:9604244-9604508 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 47, 163

Conread position: 1-257
Cow position: chr26:21912489-21912741 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 17, 104

Conread position: 1-258
Cow position: chr26:13270976-13270722 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 210

Conread position: 1-258
Cow position: chr26:27163143-27163401 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 204
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 58, 147

Conread position: 1-258
Cow position: chr26:29576092-29576339 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 86, 40

Conread position: 1-262
Cow position: chr26:32682816-32683074 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 151

Conread position: 1-264
Cow position: chr26:2531472-2531223 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 90, 60

Conread position: 1-264
Cow position: chr26:7961334-7961589 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 51, 151

Conread position: 1-264
Cow position: chr26:18918375-18918119 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 13, 153

Conread position: 1-264
Cow position: chr26:19447733-19447467 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 49, 32

Conread position: 1-264
Cow position: chr26:31701517-31701779 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 212

Conread position: 1-264
Cow position: chr26:32776804-32776550 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 121

Conread position: 1-266
Cow position: chr26:12807812-12807557 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 54

Conread position: 1-274
Cow position: chr26:9082529-9082256 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 111

Conread position: 1-274
Cow position: chr26:30806810-30806535 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 212

Conread position: 1-277
Cow position: chr26:28442308-28442036 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 90

Conread position: 1-278
Cow position: chr26:23926276-23926012 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 23, 59

Conread position: 1-278
Cow position: chr26:25393735-25394005 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 7

Conread position: 1-281
Cow position: chr26:3072260-3071988 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 79, 38

Conread position: 1-281
Cow position: chr26:6497958-6498236 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 86, 210

Conread position: 1-281
Cow position: chr26:9867426-9867140 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 159

Conread position: 1-281
Cow position: chr26:13021448-13021168 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 31

Conread position: 1-282
Cow position: chr26:21418751-21418474 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 61, 149

Conread position: 3-255
Cow position: chr26:7525774-7525520 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 37, 162

Conread position: 3-257
Cow position: chr26:20059234-20059469 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 77, 15

Conread position: 3-264
Cow position: chr26:818759-818508 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 78, 39

Conread position: 3-264
Cow position: chr26:9692607-9692350 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 100, 90

Conread position: 3-266
Cow position: chr26:32553385-32553638 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 82, 146

Conread position: 3-271
Cow position: chr26:6714579-6714326 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 83, 147

Conread position: 3-274
Cow position: chr26:16167206-16166947 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 33

Conread position: 4-255
Cow position: chr26:20256550-20256790 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 54, 120

Conread position: 4-255
Cow position: chr26:27491797-27491553 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 58

Conread position: 4-264
Cow position: chr26:8700345-8700090 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 82, 197

Conread position: 4-264
Cow position: chr26:27063965-27063713 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 192, 89

Conread position: 4-278
Cow position: chr26:34108476-34108733 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 82, 90

Conread position: 5-277
Cow position: chr26:33044790-33045055 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 81, 36

Conread position: 8-264
Cow position: chr26:6188005-6188251 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 141

Conread position: 8-274
Cow position: chr26:6447898-6447631 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 192

Conread position: 9-281
Cow position: chr26:9491641-9491901 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 73, 26

Conread position: 10-263
Cow position: chr26:11263348-11263598 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 149

Conread position: 13-264
Cow position: chr26:5246775-5246522 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 35, 137

Conread position: 14-281
Cow position: chr26:16549698-16549962 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 27

Conread position: 15-269
Cow position: chr26:16796514-16796267 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 71, 40

Conread position: 17-278
Cow position: chr26:32013348-32013602 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 71, 133

Conread position: 21-258
Cow position: chr26:7642855-7642623 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 80, 136

Conread position: 27-247
Cow position: chr26:4363033-4363244 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 30-264
Cow position: chr26:33567310-33567088 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 56, 0

Conread position: 30-278
Cow position: chr26:34738412-34738176 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 17

Conread position: 32-248
Cow position: chr26:26466985-26466780 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 37-256
Cow position: chr26:27594380-27594581 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 15, 57

Conread position: 37-278
Cow position: chr26:20260327-20260554 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 59

Conread position: 40-278
Cow position: chr26:32026619-32026392 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 108, 46

Conread position: 47-278
Cow position: chr26:29332848-29333065 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 72

Conread position: 47-278
Cow position: chr26:32898123-32897897 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 39, 102

Conread position: 48-264
Cow position: chr26:14958264-14958056 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 13

Conread position: 48-274
Cow position: chr26:20846372-20846595 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 33, 163

Conread position: 48-277
Cow position: chr26:9104532-9104308 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 33, 109

Conread position: 48-278
Cow position: chr26:10768150-10767937 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 216, 11

Conread position: 48-278
Cow position: chr26:23097429-23097209 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 13, 47

Conread position: 50-278
Cow position: chr26:4854288-4854513 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 33, 99

Conread position: 51-278
Cow position: chr26:8810884-8811104 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 182
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 31, 93

Conread position: 52-285
Cow position: chr26:28243869-28243638 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 92

Conread position: 53-266
Cow position: chr26:613919-613719 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 33, 97

Conread position: 53-278
Cow position: chr26:18692190-18692398 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 211, 13

Conread position: 55-274
Cow position: chr26:8746079-8745862 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 26, 162

Conread position: 59-247
Cow position: chr26:7148538-7148349 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 89, 0

Conread position: 60-264
Cow position: chr26:6793702-6793900 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 115

Conread position: 60-264
Cow position: chr26:9850332-9850143 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 70

Conread position: 60-264
Cow position: chr26:9853842-9853653 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 70

Conread position: 61-264
Cow position: chr26:30034643-30034449 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 161
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 20, 88

Conread position: 61-278
Cow position: chr26:21351450-21351663 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 92, 77

Conread position: 62-278
Cow position: chr26:31779237-31779456 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 126

Conread position: 62-281
Cow position: chr26:33096803-33096582 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 19, 151

Conread position: 65-256
Cow position: chr26:6793906-6794100 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 21, 0

Conread position: 69-264
Cow position: chr26:21242874-21243059 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 71-278
Cow position: chr26:19774531-19774327 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 77, 104

Conread position: 74-278
Cow position: chr26:15200741-15200541 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 164
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 190, 70

Conread position: 76-281
Cow position: chr26:23001268-23001061 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 7, 137

Conread position: 79-255
Cow position: chr26:26200626-26200792 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 80-256
Cow position: chr26:5988939-5988777 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 80-281
Cow position: chr26:31605189-31605383 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 158, 64

Conread position: 83-264
Cow position: chr26:8186435-8186609 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 92

Conread position: 90-264
Cow position: chr26:25526038-25526204 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 63, 85

Conread position: 103-271
Cow position: chr26:20448776-20448930 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 109-281
Cow position: chr26:24629555-24629720 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 154, 38

Conread position: 112-278
Cow position: chr26:35448877-35449034 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 152, 34

Conread position: 114-278
Cow position: chr26:32672624-32672462 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 34

Conread position: 117-271
Cow position: chr26:27761830-27761684 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 121-264
Cow position: chr26:22354236-22354371 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 121-277
Cow position: chr26:30568833-30568684 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 143, 23

Conread position: 122-274
Cow position: chr26:25073898-25074049 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 142, 26

Conread position: 132-278
Cow position: chr26:22249648-22249503 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 85

Conread position: 137-278
Cow position: chr26:10973950-10974090 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 11

Conread position: 151-281
Cow position: chr26:31903014-31903143 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 59

Conread position: 156-281
Cow position: chr26:20855246-20855370 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 109, 55

Show alignments to all cow chromosomes.