Cow genome map
| Conread name: | Pig4-TMW8016J06 |
| Conread position: | 1-248 |
| Cow position: | chr29:1307180-1306935 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 105 |
| Conread position: | 1-249 |
| Cow position: | chr29:686507-686262 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 1-251 |
| Cow position: | chr29:17109656-17109894 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 1-253 |
| Cow position: | chr29:26289402-26289159 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 1-256 |
| Cow position: | chr29:19756132-19756378 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 171 |
| Conread position: | 1-263 |
| Cow position: | chr29:24345780-24345512 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 83, 219 |
| Conread position: | 1-264 |
| Cow position: | chr29:1933876-1933615 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 151 |
| Conread position: | 1-264 |
| Cow position: | chr29:2071884-2071634 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 1-264 |
| Cow position: | chr29:2415123-2414875 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 174, 29 |
| Conread position: | 1-264 |
| Cow position: | chr29:4120536-4120787 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-264 |
| Cow position: | chr29:5977437-5977172 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 123 |
| Conread position: | 1-264 |
| Cow position: | chr29:6014781-6015061 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 51, 124 |
| Conread position: | 1-264 |
| Cow position: | chr29:6925706-6925951 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-264 |
| Cow position: | chr29:11398243-11397985 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 58, 97 |
| Conread position: | 1-264 |
| Cow position: | chr29:13372350-13372604 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 80, 48 |
| Conread position: | 1-264 |
| Cow position: | chr29:19428357-19428598 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-264 |
| Cow position: | chr29:20462933-20462681 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 86, 148 |
| Conread position: | 1-264 |
| Cow position: | chr29:20674124-20673860 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 170 |
| Conread position: | 1-264 |
| Cow position: | chr29:26017827-26017563 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 108 |
| Conread position: | 1-264 |
| Cow position: | chr29:26990927-26991182 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 152, 107 |
| Conread position: | 1-264 |
| Cow position: | chr29:31926606-31926350 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 120 |
| Conread position: | 1-264 |
| Cow position: | chr29:32290286-32290547 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 148 |
| Conread position: | 1-264 |
| Cow position: | chr29:40656372-40656637 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 50, 107 |
| Conread position: | 1-264 |
| Cow position: | chr29:40892030-40891757 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 55, 223 |
| Conread position: | 1-264 |
| Cow position: | chr29:44902018-44901765 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 85, 111 |
| Conread position: | 1-265 |
| Cow position: | chr29:26519777-26519521 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 134 |
| Conread position: | 1-266 |
| Cow position: | chr29:18212291-18212053 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-269 |
| Cow position: | chr29:16657375-16657633 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 86 |
| Conread position: | 1-274 |
| Cow position: | chr29:15738660-15738390 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 103 |
| Conread position: | 1-274 |
| Cow position: | chr29:37785502-37785222 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 274 |
| Conread position: | 1-277 |
| Cow position: | chr29:19792583-19792318 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 82, 50 |
| Conread position: | 1-278 |
| Cow position: | chr29:87329-87060 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 23 |
| Conread position: | 1-278 |
| Cow position: | chr29:1021953-1022251 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 235 |
| Conread position: | 1-278 |
| Cow position: | chr29:2744588-2744316 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 148 |
| Conread position: | 1-278 |
| Cow position: | chr29:3704515-3704246 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 241, 26 |
| Conread position: | 1-278 |
| Cow position: | chr29:7666345-7666073 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 79 |
| Conread position: | 1-278 |
| Cow position: | chr29:12005080-12004805 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 147 |
| Conread position: | 1-278 |
| Cow position: | chr29:12798616-12798875 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 85, 56 |
| Conread position: | 1-278 |
| Cow position: | chr29:13639669-13639415 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 264, 68 |
| Conread position: | 1-278 |
| Cow position: | chr29:17668190-17668445 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 156, 65 |
| Conread position: | 1-278 |
| Cow position: | chr29:20178446-20178177 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 216 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 50, 100 |
| Conread position: | 1-278 |
| Cow position: | chr29:32963224-32963512 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 43, 225 |
| Conread position: | 1-278 |
| Cow position: | chr29:34745970-34745705 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 140 |
| Conread position: | 1-278 |
| Cow position: | chr29:39567370-39567643 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 1-281 |
| Cow position: | chr29:28195832-28195554 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 2-255 |
| Cow position: | chr29:27833672-27833919 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 85, 170 |
| Conread position: | 2-264 |
| Cow position: | chr29:1325126-1325379 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 151, 91 |
| Conread position: | 2-264 |
| Cow position: | chr29:8164177-8163919 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 84, 16 |
| Conread position: | 2-265 |
| Cow position: | chr29:28868316-28868576 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 209 |
| Conread position: | 3-255 |
| Cow position: | chr29:45005930-45005695 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 3-256 |
| Cow position: | chr29:4480488-4480241 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 88 |
| Conread position: | 3-256 |
| Cow position: | chr29:36216805-36217048 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 3-257 |
| Cow position: | chr29:40117257-40117500 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 35 |
| Conread position: | 3-264 |
| Cow position: | chr29:9709385-9709634 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 3-264 |
| Cow position: | chr29:16609426-16609681 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 23 |
| Conread position: | 3-264 |
| Cow position: | chr29:26616050-26615783 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 46, 170 |
| Conread position: | 3-274 |
| Cow position: | chr29:15944255-15944523 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 146 |
| Conread position: | 3-274 |
| Cow position: | chr29:40583483-40583745 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 78, 146 |
| Conread position: | 3-281 |
| Cow position: | chr29:36037398-36037661 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 83 |
| Conread position: | 5-261 |
| Cow position: | chr29:44310340-44310090 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 78, 47 |
| Conread position: | 5-264 |
| Cow position: | chr29:26335690-26335437 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 79, 154 |
| Conread position: | 5-278 |
| Cow position: | chr29:36530551-36530821 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 81, 205 |
| Conread position: | 6-256 |
| Cow position: | chr29:10456863-10456628 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 9-274 |
| Cow position: | chr29:13615957-13615685 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 104 |
| Conread position: | 10-274 |
| Cow position: | chr29:35291792-35292040 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 137 |
| Conread position: | 13-264 |
| Cow position: | chr29:22935977-22936209 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 14-255 |
| Cow position: | chr29:20933402-20933642 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 172 |
| Conread position: | 15-263 |
| Cow position: | chr29:26734731-26734967 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 134 |
| Conread position: | 15-278 |
| Cow position: | chr29:2644610-2644347 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 19-278 |
| Cow position: | chr29:17402-17155 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 65, 19 |
| Conread position: | 22-281 |
| Cow position: | chr29:28775749-28775501 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 23-278 |
| Cow position: | chr29:9911882-9912128 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 27-264 |
| Cow position: | chr29:22162547-22162314 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 37, 129 |
| Conread position: | 27-278 |
| Cow position: | chr29:6844919-6844673 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 122 |
| Conread position: | 30-264 |
| Cow position: | chr29:26771154-26771373 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 30-278 |
| Cow position: | chr29:750185-749954 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 33-281 |
| Cow position: | chr29:699893-699657 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 227, 40 |
| Conread position: | 34-264 |
| Cow position: | chr29:3502776-3502991 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 36-281 |
| Cow position: | chr29:18878782-18878539 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 53, 113 |
| Conread position: | 38-258 |
| Cow position: | chr29:17135572-17135779 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 39-255 |
| Cow position: | chr29:40165962-40166176 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 102 |
| Conread position: | 39-261 |
| Cow position: | chr29:39111586-39111379 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 92 |
| Conread position: | 39-281 |
| Cow position: | chr29:14501316-14501550 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 114, 47 |
| Conread position: | 40-278 |
| Cow position: | chr29:35636147-35636383 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 113 |
| Conread position: | 40-281 |
| Cow position: | chr29:3395833-3396065 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 43, 109 |
| Conread position: | 42-281 |
| Cow position: | chr29:4065814-4066045 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 28, 6 |
| Conread position: | 43-264 |
| Cow position: | chr29:26980121-26980338 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 45-241 |
| Cow position: | chr29:7965981-7966167 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 41 |
| Conread position: | 48-264 |
| Cow position: | chr29:2984618-2984827 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 48-274 |
| Cow position: | chr29:19338710-19338939 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 35, 111 |
| Conread position: | 51-264 |
| Cow position: | chr29:94811-94615 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 51-264 |
| Cow position: | chr29:6217814-6217609 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 37, 85 |
| Conread position: | 51-264 |
| Cow position: | chr29:12679888-12680097 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 159 |
| Conread position: | 51-278 |
| Cow position: | chr29:22069013-22068790 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 45, 88 |
| Conread position: | 51-278 |
| Cow position: | chr29:22175427-22175643 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 213, 35 |
| Conread position: | 52-265 |
| Cow position: | chr29:41747179-41747384 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 162, 25 |
| Conread position: | 52-278 |
| Cow position: | chr29:41530585-41530803 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 212, 96 |
| Conread position: | 53-274 |
| Cow position: | chr29:12784220-12784004 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 8, 95 |
| Conread position: | 53-278 |
| Cow position: | chr29:16195588-16195798 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 30, 95 |
| Conread position: | 53-283 |
| Cow position: | chr29:21933377-21933154 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 28, 95 |
| Conread position: | 54-278 |
| Cow position: | chr29:37599467-37599253 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 204, 93 |
| Conread position: | 55-264 |
| Cow position: | chr29:5919587-5919383 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 26, 158 |
| Conread position: | 55-265 |
| Cow position: | chr29:31928717-31928921 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 27, 55 |
| Conread position: | 57-281 |
| Cow position: | chr29:19389226-19389446 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 24, 73 |
| Conread position: | 58-258 |
| Cow position: | chr29:35677801-35677614 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 58-281 |
| Cow position: | chr29:29769605-29769392 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 28, 87 |
| Conread position: | 59-264 |
| Cow position: | chr29:16756797-16756998 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 89, 99 |
| Conread position: | 59-278 |
| Cow position: | chr29:4194379-4194161 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 20, 71 |
| Conread position: | 61-254 |
| Cow position: | chr29:22613179-22613355 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 61-285 |
| Cow position: | chr29:17222152-17222376 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 20, 151 |
| Conread position: | 66-281 |
| Cow position: | chr29:11562363-11562572 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 110 |
| Conread position: | 69-281 |
| Cow position: | chr29:23984212-23983999 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 17, 147 |
| Conread position: | 70-264 |
| Cow position: | chr29:3502309-3502506 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 11, 153 |
| Conread position: | 70-278 |
| Cow position: | chr29:36183029-36183237 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 104, 59 |
| Conread position: | 70-278 |
| Cow position: | chr29:44378665-44378459 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 187, 79 |
| Conread position: | 71-281 |
| Cow position: | chr29:20903534-20903328 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 15, 138 |
| Conread position: | 75-264 |
| Cow position: | chr29:10659590-10659399 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 131 |
| Conread position: | 76-264 |
| Cow position: | chr29:3711145-3711329 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 154 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 76-274 |
| Cow position: | chr29:14615497-14615305 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 187, 10 |
| Conread position: | 76-281 |
| Cow position: | chr29:25474666-25474879 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 5, 40 |
| Conread position: | 78-247 |
| Cow position: | chr29:34744855-34744694 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 78-266 |
| Cow position: | chr29:23697740-23697919 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 79-264 |
| Cow position: | chr29:868535-868714 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 81, 95 |
| Conread position: | 79-264 |
| Cow position: | chr29:42886143-42886326 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 135, 68 |
| Conread position: | 80-264 |
| Cow position: | chr29:22714964-22714785 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 73, 129 |
| Conread position: | 80-266 |
| Cow position: | chr29:30440688-30440871 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 80-278 |
| Cow position: | chr29:4520099-4520291 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 162 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 184, 67 |
| Conread position: | 80-278 |
| Cow position: | chr29:16309514-16309697 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 184, 67 |
| Conread position: | 81-264 |
| Cow position: | chr29:24103784-24103606 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 67, 128 |
| Conread position: | 83-264 |
| Cow position: | chr29:19254056-19253881 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 86-278 |
| Cow position: | chr29:39642946-39643131 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 178, 62 |
| Conread position: | 94-242 |
| Cow position: | chr29:5677562-5677709 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 54, 62 |
| Conread position: | 99-261 |
| Cow position: | chr29:28446477-28446320 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 103-278 |
| Cow position: | chr29:22778395-22778221 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 50, 107 |
| Conread position: | 104-279 |
| Cow position: | chr29:6337450-6337618 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 161, 44 |
| Conread position: | 105-264 |
| Cow position: | chr29:14484757-14484605 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 109-264 |
| Cow position: | chr29:41364902-41365051 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 110-265 |
| Cow position: | chr29:26269862-26270006 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 117-278 |
| Cow position: | chr29:3100461-3100301 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 36, 82 |
| Conread position: | 120-253 |
| Cow position: | chr29:28979676-28979553 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 130-278 |
| Cow position: | chr29:4334541-4334682 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 134, 24 |
| Conread position: | 152-264 |
| Cow position: | chr29:5409314-5409201 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 158-281 |
| Cow position: | chr29:363096-363219 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 105, 53 |
| Conread position: | 160-285 |
| Cow position: | chr29:23951728-23951607 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.