Cow genome map
| Conread name: | Pig4-TMW8016J06 | 
| Conread position: | 1-240 | 
| Cow position: | chr3:49382614-49382845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 82, 148 | 
| Conread position: | 1-243 | 
| Cow position: | chr3:79905250-79905022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 147, 85 | 
| Conread position: | 1-245 | 
| Cow position: | chr3:1830903-1830671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 57, 115 | 
| Conread position: | 1-247 | 
| Cow position: | chr3:77188111-77188338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 88, 35 | 
| Conread position: | 1-250 | 
| Cow position: | chr3:66374991-66375219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 80, 34 | 
| Conread position: | 1-251 | 
| Cow position: | chr3:17695341-17695093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 40 | 
| Conread position: | 1-251 | 
| Cow position: | chr3:38346865-38347107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 47 | 
| Conread position: | 1-252 | 
| Cow position: | chr3:73708721-73708952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 6.00036e-42 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 1-253 | 
| Cow position: | chr3:36657108-36656863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 144 | 
| Conread position: | 1-255 | 
| Cow position: | chr3:30358972-30358727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 85, 148 | 
| Conread position: | 1-255 | 
| Cow position: | chr3:62999336-62999089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 34 | 
| Conread position: | 1-256 | 
| Cow position: | chr3:53149988-53150237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 154 | 
| Conread position: | 1-256 | 
| Cow position: | chr3:65019994-65020245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 175 | 
| Conread position: | 1-256 | 
| Cow position: | chr3:70566076-70565829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 154 | 
| Conread position: | 1-256 | 
| Cow position: | chr3:75479679-75479911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 85, 35 | 
| Conread position: | 1-261 | 
| Cow position: | chr3:2035960-2036213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 86, 144 | 
| Conread position: | 1-261 | 
| Cow position: | chr3:2674691-2674942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 148 | 
| Conread position: | 1-262 | 
| Cow position: | chr3:45523927-45524181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 41 | 
| Conread position: | 1-263 | 
| Cow position: | chr3:18459858-18459605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 147 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:3032063-3032322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 137, 38 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:6689656-6689918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 80, 41 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:8716909-8717169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 105 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:11640099-11640350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 86, 16 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:14552541-14552793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 20 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:18393722-18393471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 80 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:19708435-19708187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:20129609-20129862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 19 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:20997310-20997075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:27285891-27286149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 25 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:31298495-31298236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 46 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:35884291-35884036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 91, 134 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:48252558-48252801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 8, 94 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:49461275-49461013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 214 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:52017422-52017685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 166, 76 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:54434635-54434891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 48, 148 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:55085528-55085260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 154 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:55117307-55117048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 41 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:55272378-55272130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:59691566-59691814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 80, 148 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:61678353-61678611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 148 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:80053872-80053622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 139 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:80082155-80081906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 87, 98 | 
| Conread position: | 1-264 | 
| Cow position: | chr3:82056446-82056192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 6.00036e-42 | 
| Alignm gaps (pig, cow): | 200, 13 | 
| Conread position: | 1-265 | 
| Cow position: | chr3:1133430-1133173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 86, 42 | 
| Conread position: | 1-265 | 
| Cow position: | chr3:2483118-2483363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 84, 40 | 
| Conread position: | 1-265 | 
| Cow position: | chr3:54782349-54782099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 84, 47 | 
| Conread position: | 1-268 | 
| Cow position: | chr3:48530300-48530569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 63 | 
| Conread position: | 1-270 | 
| Cow position: | chr3:68647822-68648087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 210 | 
| Conread position: | 1-271 | 
| Cow position: | chr3:20802966-20802697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 213, 42 | 
| Conread position: | 1-274 | 
| Cow position: | chr3:26903779-26904040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 54 | 
| Conread position: | 1-274 | 
| Cow position: | chr3:28908541-28908274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 54, 156 | 
| Conread position: | 1-274 | 
| Cow position: | chr3:45312714-45312979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 148 | 
| Conread position: | 1-274 | 
| Cow position: | chr3:48241283-48241546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 147 | 
| Conread position: | 1-274 | 
| Cow position: | chr3:53384621-53384357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 143 | 
| Conread position: | 1-274 | 
| Cow position: | chr3:66610176-66609913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 146 | 
| Conread position: | 1-274 | 
| Cow position: | chr3:67161598-67161872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 24 | 
| Conread position: | 1-277 | 
| Cow position: | chr3:79592226-79591949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 40 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:209984-210250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 151 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:2506817-2506542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 79 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:12712261-12711984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 85, 210 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:14263057-14263328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 43 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:14626488-14626223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 262, 85 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:15662036-15661766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 40 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:17952318-17952590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 146 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:22872390-22872113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 148 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:44535098-44534826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 50, 63 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:48296373-48296643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 262, 85 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:53593037-53592760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 38 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:57554183-57553917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 83, 29 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:59001083-59000819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 264, 147 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:61539459-61539737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 37 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:71231068-71231332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 83, 150 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:72390745-72391019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 77 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:72675749-72676026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 210 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:75727927-75727650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 91, 210 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:79208329-79208064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 50 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:80581338-80581598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 86, 8 | 
| Conread position: | 1-278 | 
| Cow position: | chr3:82359695-82359976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 45, 183 | 
| Conread position: | 1-281 | 
| Cow position: | chr3:11254490-11254222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 77, 103 | 
| Conread position: | 1-281 | 
| Cow position: | chr3:12323730-12324011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 70 | 
| Conread position: | 1-281 | 
| Cow position: | chr3:13899791-13899509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 212 | 
| Conread position: | 1-281 | 
| Cow position: | chr3:30179746-30180018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 54 | 
| Conread position: | 1-281 | 
| Cow position: | chr3:31419358-31419639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 153 | 
| Conread position: | 1-281 | 
| Cow position: | chr3:69849840-69849569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 82, 140 | 
| Conread position: | 1-281 | 
| Cow position: | chr3:74088499-74088233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 152, 67 | 
| Conread position: | 1-281 | 
| Cow position: | chr3:79220511-79220791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 147 | 
| Conread position: | 1-281 | 
| Cow position: | chr3:80564623-80564900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 50, 18 | 
| Conread position: | 1-285 | 
| Cow position: | chr3:57577362-57577638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 13 | 
| Conread position: | 1-288 | 
| Cow position: | chr3:61361079-61361350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 262, 34 | 
| Conread position: | 2-263 | 
| Cow position: | chr3:61278576-61278831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 23, 41 | 
| Conread position: | 2-278 | 
| Cow position: | chr3:72018786-72019047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 3-241 | 
| Cow position: | chr3:14717478-14717710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 150, 97 | 
| Conread position: | 3-252 | 
| Cow position: | chr3:31501019-31501256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 150, 25 | 
| Conread position: | 3-253 | 
| Cow position: | chr3:48362747-48362990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 83, 116 | 
| Conread position: | 3-256 | 
| Cow position: | chr3:20663874-20663624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 81, 208 | 
| Conread position: | 3-256 | 
| Cow position: | chr3:26894335-26894570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 3-256 | 
| Cow position: | chr3:29887760-29887513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 138 | 
| Conread position: | 3-257 | 
| Cow position: | chr3:48852297-48852051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 94, 30 | 
| Conread position: | 3-264 | 
| Cow position: | chr3:10347011-10347272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 38, 154 | 
| Conread position: | 3-264 | 
| Cow position: | chr3:13353024-13353278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 150, 83 | 
| Conread position: | 3-264 | 
| Cow position: | chr3:15052278-15052035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 48, 67 | 
| Conread position: | 3-264 | 
| Cow position: | chr3:16004320-16004073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 78, 23 | 
| Conread position: | 3-264 | 
| Cow position: | chr3:21341299-21341045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 6.00036e-42 | 
| Alignm gaps (pig, cow): | 80, 69 | 
| Conread position: | 3-264 | 
| Cow position: | chr3:31047278-31047034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 82, 98 | 
| Conread position: | 3-264 | 
| Cow position: | chr3:83816137-83815873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 55, 202 | 
| Conread position: | 3-266 | 
| Cow position: | chr3:61857160-61857421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 210 | 
| Conread position: | 3-274 | 
| Cow position: | chr3:59473780-59474049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 198, 73 | 
| Conread position: | 3-278 | 
| Cow position: | chr3:5101096-5100833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 92 | 
| Conread position: | 3-278 | 
| Cow position: | chr3:18066798-18067069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 142 | 
| Conread position: | 3-278 | 
| Cow position: | chr3:27544670-27544399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 48, 35 | 
| Conread position: | 3-278 | 
| Cow position: | chr3:47284504-47284769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 3-281 | 
| Cow position: | chr3:23277878-23277606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 78, 40 | 
| Conread position: | 3-281 | 
| Cow position: | chr3:31056338-31056066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 210 | 
| Conread position: | 3-281 | 
| Cow position: | chr3:33698389-33698666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 36 | 
| Conread position: | 3-281 | 
| Cow position: | chr3:49650045-49650323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 6 | 
| Conread position: | 3-281 | 
| Cow position: | chr3:69751037-69750765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 83, 149 | 
| Conread position: | 3-282 | 
| Cow position: | chr3:49327610-49327879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 83, 59 | 
| Conread position: | 4-281 | 
| Cow position: | chr3:14466039-14465776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 82, 112 | 
| Conread position: | 4-281 | 
| Cow position: | chr3:67929601-67929324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 107 | 
| Conread position: | 5-264 | 
| Cow position: | chr3:6853837-6853588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 43, 146 | 
| Conread position: | 5-265 | 
| Cow position: | chr3:42423665-42423415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 142 | 
| Conread position: | 5-278 | 
| Cow position: | chr3:9843244-9843520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 210 | 
| Conread position: | 5-278 | 
| Cow position: | chr3:41367317-41367052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 259, 143 | 
| Conread position: | 5-278 | 
| Cow position: | chr3:50614311-50614571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 253, 66 | 
| Conread position: | 6-278 | 
| Cow position: | chr3:61171835-61171572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 259, 71 | 
| Conread position: | 7-264 | 
| Cow position: | chr3:31206540-31206792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 139 | 
| Conread position: | 7-284 | 
| Cow position: | chr3:36672337-36672050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 8-274 | 
| Cow position: | chr3:42177829-42178088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 78 | 
| Conread position: | 8-286 | 
| Cow position: | chr3:3164824-3164553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 75, 33 | 
| Conread position: | 9-255 | 
| Cow position: | chr3:58969223-58968992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 40, 69 | 
| Conread position: | 9-265 | 
| Cow position: | chr3:76138160-76138396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 50, 24 | 
| Conread position: | 10-256 | 
| Cow position: | chr3:71246706-71246935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 51, 136 | 
| Conread position: | 10-281 | 
| Cow position: | chr3:55970178-55970443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 143, 74 | 
| Conread position: | 10-281 | 
| Cow position: | chr3:82657414-82657148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 70, 145 | 
| Conread position: | 13-256 | 
| Cow position: | chr3:70895720-70895959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 197 | 
| Conread position: | 13-256 | 
| Cow position: | chr3:81939928-81940165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 74, 36 | 
| Conread position: | 13-264 | 
| Cow position: | chr3:7678350-7678585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 6.00036e-42 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 13-278 | 
| Cow position: | chr3:65968832-65969095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 15 | 
| Conread position: | 13-278 | 
| Cow position: | chr3:83490750-83491020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 203 | 
| Conread position: | 13-281 | 
| Cow position: | chr3:83920875-83921134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 28 | 
| Conread position: | 14-264 | 
| Cow position: | chr3:54903248-54903492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 139, 63 | 
| Conread position: | 15-278 | 
| Cow position: | chr3:59514790-59515037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 71, 26 | 
| Conread position: | 15-279 | 
| Cow position: | chr3:26920571-26920842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 82 | 
| Conread position: | 16-264 | 
| Cow position: | chr3:31309685-31309437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 27, 140 | 
| Conread position: | 16-281 | 
| Cow position: | chr3:2024861-2025122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 65, 133 | 
| Conread position: | 21-277 | 
| Cow position: | chr3:57754798-57754545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 56 | 
| Conread position: | 21-278 | 
| Cow position: | chr3:67704218-67704476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 31, 151 | 
| Conread position: | 22-278 | 
| Cow position: | chr3:53112851-53113107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 189 | 
| Conread position: | 25-281 | 
| Cow position: | chr3:2216044-2216302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 7, 188 | 
| Conread position: | 26-255 | 
| Cow position: | chr3:77227006-77227230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 59, 13 | 
| Conread position: | 27-264 | 
| Cow position: | chr3:53790856-53790620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 77, 186 | 
| Conread position: | 30-264 | 
| Cow position: | chr3:65800286-65800508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 75, 50 | 
| Conread position: | 30-281 | 
| Cow position: | chr3:46350343-46350607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 31-264 | 
| Cow position: | chr3:53270517-53270746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 8, 118 | 
| Conread position: | 31-266 | 
| Cow position: | chr3:35975413-35975189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 53, 119 | 
| Conread position: | 32-241 | 
| Cow position: | chr3:58158771-58158569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 116, 44 | 
| Conread position: | 32-278 | 
| Cow position: | chr3:82460876-82461112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 52, 105 | 
| Conread position: | 34-278 | 
| Cow position: | chr3:70401598-70401835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 231, 114 | 
| Conread position: | 36-274 | 
| Cow position: | chr3:19198378-19198600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 52, 113 | 
| Conread position: | 39-264 | 
| Cow position: | chr3:62826923-62826702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 47, 171 | 
| Conread position: | 40-264 | 
| Cow position: | chr3:74499924-74500155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 6, 21 | 
| Conread position: | 42-265 | 
| Cow position: | chr3:53739488-53739268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 44, 169 | 
| Conread position: | 43-264 | 
| Cow position: | chr3:70333769-70333559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 43-278 | 
| Cow position: | chr3:25691452-25691688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 139 | 
| Conread position: | 45-264 | 
| Cow position: | chr3:79148570-79148352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 36, 168 | 
| Conread position: | 48-255 | 
| Cow position: | chr3:18497734-18497929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 48-263 | 
| Cow position: | chr3:34392388-34392181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 9, 101 | 
| Conread position: | 48-263 | 
| Cow position: | chr3:65413566-65413364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 48-264 | 
| Cow position: | chr3:18854802-18855012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 97 | 
| Conread position: | 48-264 | 
| Cow position: | chr3:33253171-33252960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 13, 31 | 
| Conread position: | 48-264 | 
| Cow position: | chr3:51609525-51609737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 36, 163 | 
| Conread position: | 48-264 | 
| Cow position: | chr3:73759810-73759599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 33, 66 | 
| Conread position: | 48-274 | 
| Cow position: | chr3:3985039-3985257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 33, 101 | 
| Conread position: | 48-274 | 
| Cow position: | chr3:15229110-15228891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 38, 101 | 
| Conread position: | 48-278 | 
| Cow position: | chr3:14602004-14601778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 109, 82 | 
| Conread position: | 48-278 | 
| Cow position: | chr3:19006376-19006593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 38, 100 | 
| Conread position: | 48-278 | 
| Cow position: | chr3:44623188-44622951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 152, 40 | 
| Conread position: | 48-278 | 
| Cow position: | chr3:59208523-59208748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 33, 100 | 
| Conread position: | 48-278 | 
| Cow position: | chr3:71430498-71430273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 38, 21 | 
| Conread position: | 48-281 | 
| Cow position: | chr3:64172154-64172377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 38, 83 | 
| Conread position: | 49-264 | 
| Cow position: | chr3:68583292-68583085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 49-278 | 
| Cow position: | chr3:49140337-49140108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 86, 31 | 
| Conread position: | 49-278 | 
| Cow position: | chr3:49731928-49731707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 12, 100 | 
| Conread position: | 50-278 | 
| Cow position: | chr3:73764482-73764261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 186, 43 | 
| Conread position: | 51-255 | 
| Cow position: | chr3:39970160-39969960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 30, 159 | 
| Conread position: | 51-255 | 
| Cow position: | chr3:68708289-68708096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 102, 35 | 
| Conread position: | 51-264 | 
| Cow position: | chr3:29812956-29813161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 102, 122 | 
| Conread position: | 51-264 | 
| Cow position: | chr3:56704825-56704627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 35, 88 | 
| Conread position: | 51-277 | 
| Cow position: | chr3:60933126-60933347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 15, 98 | 
| Conread position: | 52-253 | 
| Cow position: | chr3:17895567-17895752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 34, 83 | 
| Conread position: | 52-255 | 
| Cow position: | chr3:73443374-73443179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 34, 97 | 
| Conread position: | 52-264 | 
| Cow position: | chr3:50259154-50258943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 101, 9 | 
| Conread position: | 52-264 | 
| Cow position: | chr3:73467332-73467540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 34, 74 | 
| Conread position: | 53-264 | 
| Cow position: | chr3:52863469-52863267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 119, 43 | 
| Conread position: | 53-264 | 
| Cow position: | chr3:63179582-63179779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 33, 96 | 
| Conread position: | 53-264 | 
| Cow position: | chr3:78946125-78945918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 33, 64 | 
| Conread position: | 53-274 | 
| Cow position: | chr3:364505-364282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 28, 160 | 
| Conread position: | 53-278 | 
| Cow position: | chr3:5096917-5097140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 97 | 
| Conread position: | 53-278 | 
| Cow position: | chr3:70334989-70334761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 27, 62 | 
| Conread position: | 53-281 | 
| Cow position: | chr3:17957181-17957402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 34, 51 | 
| Conread position: | 53-286 | 
| Cow position: | chr3:56655-56435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 87, 32 | 
| Conread position: | 55-278 | 
| Cow position: | chr3:8393062-8393283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 31, 156 | 
| Conread position: | 56-255 | 
| Cow position: | chr3:5416514-5416311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 30, 137 | 
| Conread position: | 56-264 | 
| Cow position: | chr3:39171767-39171566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 30, 92 | 
| Conread position: | 57-282 | 
| Cow position: | chr3:66901024-66900799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 92 | 
| Conread position: | 58-264 | 
| Cow position: | chr3:81277985-81277782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 23, 158 | 
| Conread position: | 58-278 | 
| Cow position: | chr3:77365575-77365364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 28, 74 | 
| Conread position: | 59-251 | 
| Cow position: | chr3:53046937-53046753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 23, 90 | 
| Conread position: | 59-251 | 
| Cow position: | chr3:75570721-75570540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 59-264 | 
| Cow position: | chr3:75158085-75158276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 22, 90 | 
| Conread position: | 59-267 | 
| Cow position: | chr3:26065721-26065922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 22, 117 | 
| Conread position: | 59-278 | 
| Cow position: | chr3:38691685-38691473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 131, 85 | 
| Conread position: | 59-278 | 
| Cow position: | chr3:49482984-49482773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 206, 27 | 
| Conread position: | 59-278 | 
| Cow position: | chr3:57763943-57764161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 27, 151 | 
| Conread position: | 59-281 | 
| Cow position: | chr3:63861181-63860955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 200 | 
| Conread position: | 60-264 | 
| Cow position: | chr3:42483621-42483818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 22, 89 | 
| Conread position: | 60-264 | 
| Cow position: | chr3:42588070-42588274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 112 | 
| Conread position: | 60-274 | 
| Cow position: | chr3:13577459-13577259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 204, 13 | 
| Conread position: | 61-263 | 
| Cow position: | chr3:5374057-5374248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 92, 24 | 
| Conread position: | 62-278 | 
| Cow position: | chr3:73394843-73395055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 98, 15 | 
| Conread position: | 63-256 | 
| Cow position: | chr3:5899550-5899730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 65-256 | 
| Cow position: | chr3:54945851-54946037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 21, 29 | 
| Conread position: | 66-255 | 
| Cow position: | chr3:525081-525258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 20, 89 | 
| Conread position: | 66-256 | 
| Cow position: | chr3:8060860-8061036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 67-255 | 
| Cow position: | chr3:45279185-45279377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 14, 39 | 
| Conread position: | 68-278 | 
| Cow position: | chr3:84000341-84000547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 18, 81 | 
| Conread position: | 69-278 | 
| Cow position: | chr3:13302126-13301914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 12, 103 | 
| Conread position: | 69-278 | 
| Cow position: | chr3:51578591-51578387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 17, 88 | 
| Conread position: | 71-264 | 
| Cow position: | chr3:52650797-52650614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 82, 18 | 
| Conread position: | 76-264 | 
| Cow position: | chr3:3556282-3556472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 84, 22 | 
| Conread position: | 76-264 | 
| Cow position: | chr3:55970962-55971143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 8, 99 | 
| Conread position: | 77-264 | 
| Cow position: | chr3:8604275-8604097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 77-281 | 
| Cow position: | chr3:2680250-2680454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 71, 79 | 
| Conread position: | 78-278 | 
| Cow position: | chr3:73590259-73590065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 7, 26 | 
| Conread position: | 79-263 | 
| Cow position: | chr3:30055705-30055530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 79-264 | 
| Cow position: | chr3:61143834-61144017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 74, 95 | 
| Conread position: | 79-281 | 
| Cow position: | chr3:39661707-39661519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 80-264 | 
| Cow position: | chr3:28939172-28938989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 59, 70 | 
| Conread position: | 80-278 | 
| Cow position: | chr3:4087424-4087230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 184, 68 | 
| Conread position: | 80-278 | 
| Cow position: | chr3:51234354-51234162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 184, 68 | 
| Conread position: | 80-283 | 
| Cow position: | chr3:71237899-71238096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 184, 35 | 
| Conread position: | 81-254 | 
| Cow position: | chr3:56476425-56476587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 81-264 | 
| Cow position: | chr3:22820312-22820485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 82-272 | 
| Cow position: | chr3:23269846-23270022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 83-264 | 
| Cow position: | chr3:26970570-26970744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 83-274 | 
| Cow position: | chr3:48578586-48578761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 84-278 | 
| Cow position: | chr3:41328201-41328380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 182, 58 | 
| Conread position: | 85-265 | 
| Cow position: | chr3:5045063-5044885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 63, 73 | 
| Conread position: | 88-278 | 
| Cow position: | chr3:15752878-15752701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 178, 59 | 
| Conread position: | 90-264 | 
| Cow position: | chr3:43233255-43233425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 63, 120 | 
| Conread position: | 90-281 | 
| Cow position: | chr3:55947327-55947519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 63, 124 | 
| Conread position: | 93-256 | 
| Cow position: | chr3:55836074-55835916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 65, 116 | 
| Conread position: | 93-278 | 
| Cow position: | chr3:23445135-23444963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 94-255 | 
| Cow position: | chr3:77006261-77006407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 94-278 | 
| Cow position: | chr3:44932264-44932446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 59, 115 | 
| Conread position: | 94-282 | 
| Cow position: | chr3:35074437-35074619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 59, 39 | 
| Conread position: | 96-258 | 
| Cow position: | chr3:78067379-78067222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 52, 6 | 
| Conread position: | 98-274 | 
| Cow position: | chr3:83201768-83201596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 50, 111 | 
| Conread position: | 99-264 | 
| Cow position: | chr3:59885134-59885304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 50, 122 | 
| Conread position: | 100-274 | 
| Cow position: | chr3:4861451-4861613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 101-266 | 
| Cow position: | chr3:23215821-23215654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 47, 157 | 
| Conread position: | 103-264 | 
| Cow position: | chr3:11711718-11711878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 45, 12 | 
| Conread position: | 103-274 | 
| Cow position: | chr3:188624-188793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 62, 45 | 
| Conread position: | 103-278 | 
| Cow position: | chr3:17447843-17447678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 110-278 | 
| Cow position: | chr3:15192336-15192499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 111-281 | 
| Cow position: | chr3:22900220-22900054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 42, 90 | 
| Conread position: | 112-278 | 
| Cow position: | chr3:26960821-26960656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 41, 98 | 
| Conread position: | 121-263 | 
| Cow position: | chr3:46006248-46006110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 27, 91 | 
| Conread position: | 121-274 | 
| Cow position: | chr3:25944860-25945014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 32, 91 | 
| Conread position: | 124-278 | 
| Cow position: | chr3:74878804-74878655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 140, 24 | 
| Conread position: | 125-264 | 
| Cow position: | chr3:21693728-21693865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 28, 87 | 
| Conread position: | 133-278 | 
| Cow position: | chr3:55712220-55712365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 20, 78 | 
| Conread position: | 137-264 | 
| Cow position: | chr3:74502526-74502403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 151-264 | 
| Cow position: | chr3:13890277-13890392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 152-264 | 
| Cow position: | chr3:83798028-83797918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 152-278 | 
| Cow position: | chr3:55819558-55819684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 106, 59 | 
| Conread position: | 158-278 | 
| Cow position: | chr3:81359297-81359173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 159-280 | 
| Cow position: | chr3:26739602-26739481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 105, 53 | 
| Conread position: | 160-264 | 
| Cow position: | chr3:26981883-26981983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 105 | 
| Alignm identity: | 87 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 50, 0 | 
Show alignments to all cow chromosomes.
