Cow genome map
| Conread name: | Pig4-TMW8018L06 |
| Conread position: | 2-191 |
| Cow position: | chr13:36346905-36346723 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 110, 48 |
| Conread position: | 5-181 |
| Cow position: | chr13:47574493-47574317 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 45 |
| Conread position: | 6-183 |
| Cow position: | chr13:47313618-47313442 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 75, 44 |
| Conread position: | 6-183 |
| Cow position: | chr13:52085218-52085044 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 11 |
| Conread position: | 6-190 |
| Cow position: | chr13:12618198-12618380 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 39 |
| Conread position: | 6-191 |
| Cow position: | chr13:18330042-18329861 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 75, 12 |
| Conread position: | 11-180 |
| Cow position: | chr13:60219179-60219350 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 73, 47 |
| Conread position: | 12-172 |
| Cow position: | chr13:46524281-46524448 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 12-179 |
| Cow position: | chr13:30241651-30241817 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 12-179 |
| Cow position: | chr13:54864031-54864196 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 9 |
| Conread position: | 12-180 |
| Cow position: | chr13:2799970-2800137 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-181 |
| Cow position: | chr13:4944476-4944645 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-181 |
| Cow position: | chr13:30469032-30468864 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 38 |
| Conread position: | 12-181 |
| Cow position: | chr13:31608351-31608183 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-181 |
| Cow position: | chr13:35760628-35760796 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-182 |
| Cow position: | chr13:6665042-6664873 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 66, 38 |
| Conread position: | 12-182 |
| Cow position: | chr13:9537327-9537496 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-183 |
| Cow position: | chr13:15256974-15257144 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-190 |
| Cow position: | chr13:43974868-43974691 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 12-191 |
| Cow position: | chr13:3314710-3314887 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 12-191 |
| Cow position: | chr13:9570927-9570751 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 12-191 |
| Cow position: | chr13:13902942-13903119 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-191 |
| Cow position: | chr13:14399990-14399811 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 69, 42 |
| Conread position: | 12-191 |
| Cow position: | chr13:15280371-15280550 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 12-191 |
| Cow position: | chr13:17456185-17456362 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 12-191 |
| Cow position: | chr13:20571623-20571452 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 101, 38 |
| Conread position: | 12-191 |
| Cow position: | chr13:31510229-31510410 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 12-191 |
| Cow position: | chr13:32152699-32152522 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-191 |
| Cow position: | chr13:32794257-32794080 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 12-191 |
| Cow position: | chr13:32922228-32922049 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 12-191 |
| Cow position: | chr13:34038472-34038295 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 69, 16 |
| Conread position: | 12-191 |
| Cow position: | chr13:34345388-34345566 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-191 |
| Cow position: | chr13:44323879-44323701 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 12-191 |
| Cow position: | chr13:48627637-48627811 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 38 |
| Conread position: | 12-191 |
| Cow position: | chr13:54238362-54238185 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 67, 42 |
| Conread position: | 12-192 |
| Cow position: | chr13:28699906-28700085 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 12-192 |
| Cow position: | chr13:32734101-32733922 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-341 |
| Cow position: | chr13:11826672-11826333 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 104, 38 |
| Conread position: | 12-635 |
| Cow position: | chr13:49805856-49805218 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 38 |
| Conread position: | 13-190 |
| Cow position: | chr13:41807653-41807476 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 39 |
| Conread position: | 13-575 |
| Cow position: | chr13:34113170-34112630 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 37 |
| Conread position: | 14-191 |
| Cow position: | chr13:26823042-26822867 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 75, 35 |
| Conread position: | 14-191 |
| Cow position: | chr13:34190333-34190508 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 74, 36 |
| Conread position: | 17-180 |
| Cow position: | chr13:29055337-29055175 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-180 |
| Cow position: | chr13:30505349-30505187 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 17-180 |
| Cow position: | chr13:43628386-43628548 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-180 |
| Cow position: | chr13:53051927-53052089 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-181 |
| Cow position: | chr13:21905821-21905658 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-181 |
| Cow position: | chr13:26204368-26204205 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-181 |
| Cow position: | chr13:48945847-48945691 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 94, 33 |
| Conread position: | 17-182 |
| Cow position: | chr13:13312684-13312848 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 17-189 |
| Cow position: | chr13:11254567-11254401 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 94, 33 |
| Conread position: | 17-190 |
| Cow position: | chr13:2805191-2805019 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-191 |
| Cow position: | chr13:4486944-4487117 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-191 |
| Cow position: | chr13:4663712-4663885 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 17-191 |
| Cow position: | chr13:5498711-5498537 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 37 |
| Conread position: | 17-191 |
| Cow position: | chr13:6342973-6343146 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 17-191 |
| Cow position: | chr13:19394033-19393860 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-191 |
| Cow position: | chr13:38013564-38013398 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 17-191 |
| Cow position: | chr13:38612310-38612482 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 67, 15 |
| Conread position: | 17-192 |
| Cow position: | chr13:681142-681316 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-192 |
| Cow position: | chr13:3786475-3786649 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-192 |
| Cow position: | chr13:11390349-11390523 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-192 |
| Cow position: | chr13:32080967-32081141 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 17-192 |
| Cow position: | chr13:42087039-42086865 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 17-192 |
| Cow position: | chr13:58313423-58313597 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-192 |
| Cow position: | chr13:60646495-60646321 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-210 |
| Cow position: | chr13:34940770-34940958 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 33 |
| Conread position: | 17-531 |
| Cow position: | chr13:18815612-18815092 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 33 |
| Conread position: | 21-191 |
| Cow position: | chr13:16345051-16344884 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 61-191 |
| Cow position: | chr13:9301287-9301421 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 80-785 |
| Cow position: | chr13:33351572-33352278 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 190 |
| Conread position: | 214-735 |
| Cow position: | chr13:6616073-6616597 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 73 |
| Conread position: | 215-785 |
| Cow position: | chr13:1155043-1155621 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 72 |
| Conread position: | 299-735 |
| Cow position: | chr13:26382638-26383080 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 343 |
| Conread position: | 328-731 |
| Cow position: | chr13:37483709-37484115 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 187 |
| Conread position: | 359-780 |
| Cow position: | chr13:25434605-25435028 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 128 |
| Conread position: | 360-780 |
| Cow position: | chr13:41254145-41253714 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 391-735 |
| Cow position: | chr13:34052109-34052450 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 41 |
| Conread position: | 460-735 |
| Cow position: | chr13:9900722-9900453 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 213, 29 |
| Conread position: | 462-735 |
| Cow position: | chr13:43384212-43384483 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 27, 182 |
| Conread position: | 484-758 |
| Cow position: | chr13:48629383-48629117 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 198, 23 |
| Conread position: | 513-775 |
| Cow position: | chr13:1767141-1766869 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 174, 130 |
| Conread position: | 514-778 |
| Cow position: | chr13:43629392-43629673 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 250 |
Show alignments to all cow chromosomes.