Cow genome map

Conread name: Pig4-TMW8018L06

Conread position: 1-183
Cow position: chr17:40801901-40802089 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 140

Conread position: 5-191
Cow position: chr17:2839175-2839368 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 136

Conread position: 5-191
Cow position: chr17:20091457-20091275 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 19

Conread position: 5-191
Cow position: chr17:27978272-27978452 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 12

Conread position: 5-203
Cow position: chr17:145041-144845 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 79, 45

Conread position: 6-181
Cow position: chr17:21666164-21666339 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 45

Conread position: 6-182
Cow position: chr17:980020-979844 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 45

Conread position: 6-191
Cow position: chr17:18123510-18123327 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 44

Conread position: 6-192
Cow position: chr17:23321254-23321069 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 44

Conread position: 6-192
Cow position: chr17:24785359-24785541 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 12

Conread position: 7-183
Cow position: chr17:3780811-3780992 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 54

Conread position: 7-535
Cow position: chr17:18242149-18242662 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 18

Conread position: 10-180
Cow position: chr17:2078810-2078977 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 11

Conread position: 12-171
Cow position: chr17:2177152-2177309 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 72, 38

Conread position: 12-177
Cow position: chr17:12290315-12290150 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 38

Conread position: 12-180
Cow position: chr17:29950384-29950551 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 38

Conread position: 12-181
Cow position: chr17:14242998-14243166 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 38

Conread position: 12-181
Cow position: chr17:18099902-18099734 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 38

Conread position: 12-182
Cow position: chr17:2583564-2583728 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 38

Conread position: 12-182
Cow position: chr17:11083963-11083794 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 38

Conread position: 12-183
Cow position: chr17:33934650-33934479 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 69, 38

Conread position: 12-191
Cow position: chr17:1569048-1568872 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 38

Conread position: 12-191
Cow position: chr17:2201469-2201647 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 38

Conread position: 12-191
Cow position: chr17:6071712-6071891 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 69, 41

Conread position: 12-191
Cow position: chr17:6263027-6263204 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 40

Conread position: 12-191
Cow position: chr17:8222877-8223055 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 38

Conread position: 12-191
Cow position: chr17:15853907-15854085 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 38

Conread position: 12-191
Cow position: chr17:16447310-16447133 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 38

Conread position: 12-191
Cow position: chr17:16903751-16903929 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 38

Conread position: 12-191
Cow position: chr17:22774291-22774114 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 72, 38

Conread position: 12-191
Cow position: chr17:25739468-25739646 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 38

Conread position: 12-191
Cow position: chr17:31232842-31233019 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 38

Conread position: 12-191
Cow position: chr17:38829054-38829229 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 16

Conread position: 12-191
Cow position: chr17:42313056-42313233 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 69, 38

Conread position: 12-192
Cow position: chr17:8212228-8212407 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 38

Conread position: 12-192
Cow position: chr17:17221485-17221661 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 38

Conread position: 13-205
Cow position: chr17:16118293-16118100 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 68, 41

Conread position: 15-183
Cow position: chr17:11913574-11913407 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 35

Conread position: 17-175
Cow position: chr17:36159858-36159700 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 34

Conread position: 17-176
Cow position: chr17:41893213-41893056 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 33

Conread position: 17-180
Cow position: chr17:37415711-37415553 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 35

Conread position: 17-181
Cow position: chr17:8994163-8994000 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 64, 33

Conread position: 17-182
Cow position: chr17:254274-254434 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 96, 33

Conread position: 17-182
Cow position: chr17:3197453-3197289 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 33

Conread position: 17-182
Cow position: chr17:23337871-23337711 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 37

Conread position: 17-183
Cow position: chr17:29156550-29156715 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 33

Conread position: 17-190
Cow position: chr17:36790242-36790415 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 64, 33

Conread position: 17-191
Cow position: chr17:19133640-19133470 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 94, 33

Conread position: 17-191
Cow position: chr17:22563321-22563493 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 33

Conread position: 17-192
Cow position: chr17:6612199-6612373 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 33

Conread position: 17-192
Cow position: chr17:16505570-16505396 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 33

Conread position: 17-192
Cow position: chr17:20390951-20391125 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 33

Conread position: 17-192
Cow position: chr17:29824785-29824609 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 33

Conread position: 17-192
Cow position: chr17:30182403-30182230 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 64, 33

Conread position: 17-192
Cow position: chr17:34236074-34235900 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 33

Conread position: 17-192
Cow position: chr17:39824017-39823843 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 67, 33

Conread position: 17-629
Cow position: chr17:20642888-20643478 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 34

Conread position: 18-607
Cow position: chr17:44482027-44482609 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 379
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 63, 15

Conread position: 59-182
Cow position: chr17:18200936-18201062 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 44

Conread position: 60-182
Cow position: chr17:922837-922963 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 77

Conread position: 60-191
Cow position: chr17:29075159-29075026 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 21, 126

Conread position: 62-182
Cow position: chr17:2033709-2033833 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 62-191
Cow position: chr17:41014379-41014509 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 65-680
Cow position: chr17:5748621-5747987 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 219

Conread position: 103-775
Cow position: chr17:2269998-2270684 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 161

Conread position: 214-735
Cow position: chr17:11913340-11912825 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 74

Conread position: 215-735
Cow position: chr17:16118059-16117553 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 50

Conread position: 254-724
Cow position: chr17:14249633-14249159 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 17

Conread position: 307-735
Cow position: chr17:25145860-25145433 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 203

Conread position: 373-783
Cow position: chr17:5745745-5745312 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 136

Conread position: 389-774
Cow position: chr17:23802997-23803385 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 59

Conread position: 419-735
Cow position: chr17:3154203-3153897 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 210
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 98, 0

Conread position: 443-735
Cow position: chr17:15984943-15985225 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 235, 163

Conread position: 453-779
Cow position: chr17:5042087-5041745 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 31

Conread position: 540-721
Cow position: chr17:10473516-10473689 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 151, 102

Show alignments to all cow chromosomes.