Cow genome map

Conread name: Pig4-TMW8018L06

Conread position: 2-181
Cow position: chr19:36189086-36189267 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 51

Conread position: 3-191
Cow position: chr19:35381691-35381500 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 51

Conread position: 4-177
Cow position: chr19:27347679-27347503 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 84

Conread position: 5-191
Cow position: chr19:1152048-1152229 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 79, 45

Conread position: 5-191
Cow position: chr19:7610003-7610187 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 45

Conread position: 6-181
Cow position: chr19:40790961-40790789 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 44

Conread position: 6-182
Cow position: chr19:7491484-7491659 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 45

Conread position: 6-191
Cow position: chr19:12209535-12209351 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 44

Conread position: 6-235
Cow position: chr19:44216455-44216227 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 15, 27

Conread position: 6-617
Cow position: chr19:24688383-24688994 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 11

Conread position: 7-181
Cow position: chr19:30473754-30473576 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 24

Conread position: 7-191
Cow position: chr19:39076830-39077016 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 53

Conread position: 7-191
Cow position: chr19:46821237-46821430 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 7-701
Cow position: chr19:15720489-15719788 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 47

Conread position: 12-180
Cow position: chr19:39394602-39394769 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 38

Conread position: 12-181
Cow position: chr19:33876817-33876985 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 69, 38

Conread position: 12-181
Cow position: chr19:40849088-40848920 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 38

Conread position: 12-181
Cow position: chr19:48534131-48534294 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 38

Conread position: 12-182
Cow position: chr19:5044297-5044130 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 42

Conread position: 12-182
Cow position: chr19:14157809-14157978 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 38

Conread position: 12-182
Cow position: chr19:19501290-19501121 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 38

Conread position: 12-191
Cow position: chr19:2269900-2269722 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 38

Conread position: 12-191
Cow position: chr19:14180599-14180423 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 26

Conread position: 12-191
Cow position: chr19:28575997-28575823 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 38

Conread position: 12-191
Cow position: chr19:30237111-30237287 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 72, 38

Conread position: 12-191
Cow position: chr19:39182139-39181961 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 69, 38

Conread position: 12-191
Cow position: chr19:39696885-39697062 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 75, 38

Conread position: 12-191
Cow position: chr19:50833503-50833324 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 39

Conread position: 15-180
Cow position: chr19:33624977-33625140 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 17

Conread position: 16-210
Cow position: chr19:799772-799967 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 65, 34

Conread position: 17-181
Cow position: chr19:2019358-2019199 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 34

Conread position: 17-181
Cow position: chr19:20433832-20433674 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 33

Conread position: 17-181
Cow position: chr19:30717296-30717459 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 33

Conread position: 17-181
Cow position: chr19:34985496-34985656 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 33

Conread position: 17-183
Cow position: chr19:1663478-1663638 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 34

Conread position: 17-183
Cow position: chr19:20672189-20672022 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 33

Conread position: 17-183
Cow position: chr19:25085605-25085761 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 17-191
Cow position: chr19:15796830-15797003 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 33

Conread position: 17-191
Cow position: chr19:20403689-20403861 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 67, 33

Conread position: 17-191
Cow position: chr19:33944972-33945145 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 33

Conread position: 17-191
Cow position: chr19:35782992-35782819 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 67, 33

Conread position: 17-191
Cow position: chr19:38397201-38397035 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 96, 33

Conread position: 17-192
Cow position: chr19:3406586-3406760 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 33

Conread position: 17-192
Cow position: chr19:5902433-5902607 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 33

Conread position: 17-192
Cow position: chr19:12652281-12652455 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 33

Conread position: 17-192
Cow position: chr19:19389240-19389414 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 33

Conread position: 17-192
Cow position: chr19:26518925-26518751 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 33

Conread position: 17-192
Cow position: chr19:27082009-27081835 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 33

Conread position: 17-192
Cow position: chr19:29366934-29367108 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 33

Conread position: 17-192
Cow position: chr19:29624442-29624616 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 33

Conread position: 17-192
Cow position: chr19:30515636-30515462 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 33

Conread position: 17-192
Cow position: chr19:41204821-41204647 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 33

Conread position: 17-192
Cow position: chr19:49360296-49360134 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 33

Conread position: 17-192
Cow position: chr19:54542587-54542413 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 33

Conread position: 17-192
Cow position: chr19:55164251-55164077 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 33

Conread position: 17-194
Cow position: chr19:41739-41915 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 64, 33

Conread position: 17-355
Cow position: chr19:14156701-14156366 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 33

Conread position: 17-392
Cow position: chr19:7065083-7065475 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 267
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 64, 33

Conread position: 21-180
Cow position: chr19:42647961-42647813 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 59-183
Cow position: chr19:42241178-42241052 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 60-191
Cow position: chr19:26976870-26976735 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 110-576
Cow position: chr19:36707549-36707083 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 305
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 84, 133

Conread position: 217-734
Cow position: chr19:2260806-2260303 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 70

Conread position: 329-767
Cow position: chr19:13267753-13267326 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 18

Conread position: 350-735
Cow position: chr19:25041880-25041504 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 100

Conread position: 366-724
Cow position: chr19:39577108-39576758 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 157

Conread position: 395-783
Cow position: chr19:20093709-20093329 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 258
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 284, 13

Conread position: 443-780
Cow position: chr19:47109558-47109921 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 147

Conread position: 449-735
Cow position: chr19:25955295-25955019 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 233, 43

Conread position: 500-773
Cow position: chr19:2734043-2734325 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 175, 21

Conread position: 546-778
Cow position: chr19:17274081-17273852 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 136, 74

Show alignments to all cow chromosomes.