Cow genome map

Conread name: Pig4-TMW8018L06

Conread position: 2-181
Cow position: chr21:3497043-3496864 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 14, 49

Conread position: 3-191
Cow position: chr21:81199-81390 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 82

Conread position: 3-191
Cow position: chr21:39059866-39059678 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 51

Conread position: 5-375
Cow position: chr21:28598052-28598441 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 6-191
Cow position: chr21:2503213-2503394 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 15

Conread position: 6-191
Cow position: chr21:4812876-4812692 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 44

Conread position: 6-191
Cow position: chr21:43403967-43403786 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 75, 12

Conread position: 6-192
Cow position: chr21:24887115-24887297 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 83, 11

Conread position: 7-176
Cow position: chr21:18837193-18837014 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 176

Conread position: 7-182
Cow position: chr21:9863481-9863305 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 46

Conread position: 7-190
Cow position: chr21:22855363-22855549 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 40

Conread position: 12-180
Cow position: chr21:4559600-4559433 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 38

Conread position: 12-180
Cow position: chr21:25986889-25987055 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 38

Conread position: 12-181
Cow position: chr21:30565219-30565387 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 38

Conread position: 12-181
Cow position: chr21:33257030-33257198 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 38

Conread position: 12-181
Cow position: chr21:47648817-47648984 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 69, 38

Conread position: 12-181
Cow position: chr21:49655709-49655541 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 38

Conread position: 12-182
Cow position: chr21:149621-149790 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 69, 38

Conread position: 12-182
Cow position: chr21:2878366-2878196 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 38

Conread position: 12-182
Cow position: chr21:16277876-16278044 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 38

Conread position: 12-182
Cow position: chr21:25156758-25156927 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 38

Conread position: 12-190
Cow position: chr21:43176-43354 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 38

Conread position: 12-190
Cow position: chr21:16768649-16768472 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 38

Conread position: 12-191
Cow position: chr21:3766296-3766119 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 38

Conread position: 12-191
Cow position: chr21:6765548-6765372 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 69, 20

Conread position: 12-191
Cow position: chr21:17144160-17144340 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 40

Conread position: 12-191
Cow position: chr21:18979691-18979518 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 38

Conread position: 12-191
Cow position: chr21:21217000-21216823 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 17

Conread position: 12-191
Cow position: chr21:23585566-23585743 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 38

Conread position: 12-191
Cow position: chr21:27342927-27342751 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 38

Conread position: 12-191
Cow position: chr21:27608228-27608050 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 69, 38

Conread position: 12-191
Cow position: chr21:28210339-28210516 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 77, 9

Conread position: 12-191
Cow position: chr21:28915501-28915324 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 38

Conread position: 12-191
Cow position: chr21:30595616-30595438 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 38

Conread position: 12-191
Cow position: chr21:31512796-31512619 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 23

Conread position: 12-191
Cow position: chr21:33832507-33832324 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 38

Conread position: 12-191
Cow position: chr21:34657465-34657641 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 39

Conread position: 12-191
Cow position: chr21:36163811-36163634 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 38

Conread position: 12-191
Cow position: chr21:36534734-36534556 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 38

Conread position: 12-191
Cow position: chr21:37298612-37298791 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 40

Conread position: 12-191
Cow position: chr21:44762208-44762032 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 39

Conread position: 12-191
Cow position: chr21:48530638-48530823 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 38

Conread position: 12-192
Cow position: chr21:37923650-37923829 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 38

Conread position: 12-192
Cow position: chr21:46974259-46974083 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 38

Conread position: 12-458
Cow position: chr21:23448723-23449170 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 40

Conread position: 12-586
Cow position: chr21:38450520-38449932 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 38

Conread position: 12-621
Cow position: chr21:20244126-20243503 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 38

Conread position: 12-642
Cow position: chr21:18819157-18818524 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 38

Conread position: 12-719
Cow position: chr21:17207652-17208369 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 38

Conread position: 12-777
Cow position: chr21:24297597-24296819 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 14-191
Cow position: chr21:13111646-13111470 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 36

Conread position: 15-191
Cow position: chr21:45182-45354 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 34

Conread position: 15-191
Cow position: chr21:10853742-10853917 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 35

Conread position: 15-680
Cow position: chr21:10570764-10571436 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 35

Conread position: 17-166
Cow position: chr21:32573458-32573608 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 33

Conread position: 17-170
Cow position: chr21:1057941-1058093 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 33

Conread position: 17-173
Cow position: chr21:23801959-23801803 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 74, 25

Conread position: 17-181
Cow position: chr21:19351382-19351219 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 33

Conread position: 17-182
Cow position: chr21:21412110-21411952 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 29

Conread position: 17-183
Cow position: chr21:2419676-2419838 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 32

Conread position: 17-183
Cow position: chr21:12802633-12802466 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 33

Conread position: 17-183
Cow position: chr21:20263197-20263032 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 33

Conread position: 17-190
Cow position: chr21:31275822-31275993 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 61, 8

Conread position: 17-191
Cow position: chr21:6623290-6623464 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 64, 33

Conread position: 17-191
Cow position: chr21:20588186-20588356 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 33

Conread position: 17-191
Cow position: chr21:27066120-27065947 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 35

Conread position: 17-191
Cow position: chr21:39400715-39400887 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 33

Conread position: 17-191
Cow position: chr21:42842810-42842638 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 33

Conread position: 17-192
Cow position: chr21:6965993-6965819 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 64, 33

Conread position: 17-192
Cow position: chr21:26628247-26628421 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 64, 33

Conread position: 17-192
Cow position: chr21:33710021-33709847 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 33

Conread position: 17-192
Cow position: chr21:33901225-33901051 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 33

Conread position: 17-192
Cow position: chr21:36892753-36892579 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 33

Conread position: 17-192
Cow position: chr21:42917272-42917446 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 33

Conread position: 17-197
Cow position: chr21:30966464-30966285 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 33

Conread position: 17-734
Cow position: chr21:29253716-29252994 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 33

Conread position: 18-171
Cow position: chr21:26830084-26829931 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 32

Conread position: 18-177
Cow position: chr21:29500018-29500176 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 32

Conread position: 18-183
Cow position: chr21:48234836-48234676 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 32

Conread position: 46-191
Cow position: chr21:38899955-38900095 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 13

Conread position: 59-182
Cow position: chr21:22719580-22719458 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 22

Conread position: 59-680
Cow position: chr21:28441959-28442580 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 197

Conread position: 60-182
Cow position: chr21:4191811-4191936 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 214-731
Cow position: chr21:24887354-24887902 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 76

Conread position: 214-735
Cow position: chr21:38900158-38900672 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 73

Conread position: 214-742
Cow position: chr21:81457-81976 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 73

Conread position: 214-785
Cow position: chr21:39400977-39401556 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 73

Conread position: 235-735
Cow position: chr21:42464431-42463943 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 56

Conread position: 309-772
Cow position: chr21:34391487-34391027 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 23

Conread position: 355-779
Cow position: chr21:3236055-3236478 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 41

Conread position: 393-722
Cow position: chr21:2657158-2657473 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 272, 59

Conread position: 396-735
Cow position: chr21:393588-393919 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 286, 106

Conread position: 471-781
Cow position: chr21:42190517-42190220 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 204, 35

Conread position: 518-731
Cow position: chr21:42414417-42414209 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 163, 102

Conread position: 538-781
Cow position: chr21:31278484-31278736 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 141, 72

Conread position: 544-778
Cow position: chr21:32237008-32237247 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 134, 66

Show alignments to all cow chromosomes.