Cow genome map
| Conread name: | Pig4-TMW8018L06 |
| Conread position: | 4-191 |
| Cow position: | chr23:40890061-40890244 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 5-191 |
| Cow position: | chr23:16999728-16999911 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 79, 15 |
| Conread position: | 5-385 |
| Cow position: | chr23:10424218-10424605 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 285 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 107, 47 |
| Conread position: | 6-182 |
| Cow position: | chr23:19493140-19493312 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 12 |
| Conread position: | 6-191 |
| Cow position: | chr23:5624290-5624107 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 6-191 |
| Cow position: | chr23:20152929-20152748 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 12 |
| Conread position: | 6-192 |
| Cow position: | chr23:29043074-29043257 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 75, 11 |
| Conread position: | 6-198 |
| Cow position: | chr23:2370307-2370498 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 7-179 |
| Cow position: | chr23:29625271-29625439 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 5 |
| Conread position: | 7-182 |
| Cow position: | chr23:11078558-11078741 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 52, 22 |
| Conread position: | 7-182 |
| Cow position: | chr23:39108531-39108357 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 9, 47 |
| Conread position: | 7-191 |
| Cow position: | chr23:6593648-6593464 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 72 |
| Conread position: | 9-177 |
| Cow position: | chr23:1398935-1398774 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 100, 41 |
| Conread position: | 11-183 |
| Cow position: | chr23:1322103-1321932 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 70, 39 |
| Conread position: | 12-159 |
| Cow position: | chr23:1535417-1535563 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 12-177 |
| Cow position: | chr23:1326021-1325857 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-180 |
| Cow position: | chr23:14959659-14959496 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 100, 38 |
| Conread position: | 12-181 |
| Cow position: | chr23:2761192-2761360 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 71, 38 |
| Conread position: | 12-181 |
| Cow position: | chr23:11377023-11376855 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-181 |
| Cow position: | chr23:11782080-11782248 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-181 |
| Cow position: | chr23:37199216-37199048 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-181 |
| Cow position: | chr23:39389363-39389531 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-182 |
| Cow position: | chr23:24098422-24098591 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-191 |
| Cow position: | chr23:345174-344998 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 103, 38 |
| Conread position: | 12-191 |
| Cow position: | chr23:1959421-1959599 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-191 |
| Cow position: | chr23:2023790-2023612 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 12-191 |
| Cow position: | chr23:11343791-11343969 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-191 |
| Cow position: | chr23:14970657-14970482 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 72, 24 |
| Conread position: | 12-191 |
| Cow position: | chr23:15180253-15180430 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 38 |
| Conread position: | 12-191 |
| Cow position: | chr23:20541269-20541439 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 99, 38 |
| Conread position: | 12-191 |
| Cow position: | chr23:25553883-25554063 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 6, 39 |
| Conread position: | 12-191 |
| Cow position: | chr23:27402428-27402606 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-191 |
| Cow position: | chr23:28915624-28915800 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 12-191 |
| Cow position: | chr23:30623206-30623029 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 12-191 |
| Cow position: | chr23:36027958-36027780 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 39 |
| Conread position: | 12-191 |
| Cow position: | chr23:40825092-40825270 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 12-192 |
| Cow position: | chr23:1113246-1113425 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-192 |
| Cow position: | chr23:30634300-30634121 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-721 |
| Cow position: | chr23:40553828-40553107 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 13-191 |
| Cow position: | chr23:4516828-4517005 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 68, 39 |
| Conread position: | 13-192 |
| Cow position: | chr23:11079680-11079858 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 37 |
| Conread position: | 14-191 |
| Cow position: | chr23:22170204-22170379 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 36 |
| Conread position: | 14-192 |
| Cow position: | chr23:24119851-24120028 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 67, 36 |
| Conread position: | 16-191 |
| Cow position: | chr23:2791476-2791301 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 17-180 |
| Cow position: | chr23:14839889-14839727 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 17-180 |
| Cow position: | chr23:33817749-33817908 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 17-181 |
| Cow position: | chr23:25357645-25357808 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 17-181 |
| Cow position: | chr23:31605727-31605890 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-182 |
| Cow position: | chr23:29472010-29471846 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-183 |
| Cow position: | chr23:35937118-35937282 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 17-188 |
| Cow position: | chr23:21277336-21277174 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 17-190 |
| Cow position: | chr23:6173721-6173549 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 35 |
| Conread position: | 17-191 |
| Cow position: | chr23:15528886-15529059 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-191 |
| Cow position: | chr23:20170906-20170735 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 17-192 |
| Cow position: | chr23:954501-954327 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 17-192 |
| Cow position: | chr23:2529097-2528923 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-192 |
| Cow position: | chr23:5458038-5458212 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-192 |
| Cow position: | chr23:15020216-15020391 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-192 |
| Cow position: | chr23:27313144-27313318 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-192 |
| Cow position: | chr23:28222000-28222175 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 37 |
| Conread position: | 17-192 |
| Cow position: | chr23:28987642-28987815 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-198 |
| Cow position: | chr23:16056998-16057175 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 33 |
| Conread position: | 17-572 |
| Cow position: | chr23:29459954-29459399 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 23-191 |
| Cow position: | chr23:25370587-25370422 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 23-191 |
| Cow position: | chr23:25412195-25412029 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 59-191 |
| Cow position: | chr23:14738235-14738371 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 69-191 |
| Cow position: | chr23:362296-362171 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 118 |
| Conread position: | 72-399 |
| Cow position: | chr23:17551059-17550745 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 204-777 |
| Cow position: | chr23:6593405-6592812 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 84 |
| Conread position: | 214-735 |
| Cow position: | chr23:11128546-11129070 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 12 |
| Conread position: | 214-736 |
| Cow position: | chr23:9733718-9734251 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 18 |
| Conread position: | 214-742 |
| Cow position: | chr23:10554691-10554170 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 73 |
| Conread position: | 328-735 |
| Cow position: | chr23:18108147-18108545 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 23, 58 |
| Conread position: | 372-777 |
| Cow position: | chr23:25865207-25864797 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 250 |
| Conread position: | 377-735 |
| Cow position: | chr23:8959085-8959432 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 57 |
| Conread position: | 513-736 |
| Cow position: | chr23:6683334-6683570 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 115, 103 |
Show alignments to all cow chromosomes.