Cow genome map
| Conread name: | Pig4-TMW8018L06 |
| Conread position: | 1-191 |
| Cow position: | chr5:23845432-23845244 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 1-205 |
| Cow position: | chr5:43991390-43991606 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 5-180 |
| Cow position: | chr5:55087980-55088152 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 5-192 |
| Cow position: | chr5:68593547-68593730 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 90, 45 |
| Conread position: | 5-206 |
| Cow position: | chr5:66256756-66256954 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 85, 45 |
| Conread position: | 5-764 |
| Cow position: | chr5:48534970-48535697 (view UCSC Genome Browser custom track) |
| Alignm length: | 781 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 47 |
| Conread position: | 6-175 |
| Cow position: | chr5:41951939-41951773 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 6-180 |
| Cow position: | chr5:1344764-1344593 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 6-181 |
| Cow position: | chr5:6180664-6180838 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 6-181 |
| Cow position: | chr5:54785980-54785809 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 75, 12 |
| Conread position: | 6-182 |
| Cow position: | chr5:7140971-7140800 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 83, 44 |
| Conread position: | 6-192 |
| Cow position: | chr5:49521827-49522013 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 75, 12 |
| Conread position: | 6-192 |
| Cow position: | chr5:51746343-51746528 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 75, 44 |
| Conread position: | 6-194 |
| Cow position: | chr5:9002982-9002798 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 75, 12 |
| Conread position: | 7-175 |
| Cow position: | chr5:19969918-19969749 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 45 |
| Conread position: | 7-181 |
| Cow position: | chr5:18901446-18901618 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 7-182 |
| Cow position: | chr5:34527692-34527866 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 7-183 |
| Cow position: | chr5:34299996-34300182 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 11-171 |
| Cow position: | chr5:26135138-26134979 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 39 |
| Conread position: | 12-171 |
| Cow position: | chr5:47871977-47871819 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-179 |
| Cow position: | chr5:60446563-60446729 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-181 |
| Cow position: | chr5:1338790-1338622 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-181 |
| Cow position: | chr5:6151701-6151533 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-181 |
| Cow position: | chr5:14636447-14636280 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 76, 16 |
| Conread position: | 12-181 |
| Cow position: | chr5:21189352-21189517 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 38 |
| Conread position: | 12-181 |
| Cow position: | chr5:43984215-43984383 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-181 |
| Cow position: | chr5:46676744-46676912 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-181 |
| Cow position: | chr5:64778871-64778702 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 42 |
| Conread position: | 12-182 |
| Cow position: | chr5:5787199-5787030 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 12-182 |
| Cow position: | chr5:18404925-18404758 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 69, 40 |
| Conread position: | 12-182 |
| Cow position: | chr5:19978783-19978614 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-182 |
| Cow position: | chr5:25912848-25913018 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 40 |
| Conread position: | 12-182 |
| Cow position: | chr5:39936231-39936399 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 12-182 |
| Cow position: | chr5:41411305-41411138 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 99, 38 |
| Conread position: | 12-182 |
| Cow position: | chr5:43437811-43437642 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-182 |
| Cow position: | chr5:44709241-44709072 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-182 |
| Cow position: | chr5:47343004-47343173 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-182 |
| Cow position: | chr5:53185374-53185203 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 12-182 |
| Cow position: | chr5:58461560-58461393 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 69, 12 |
| Conread position: | 12-182 |
| Cow position: | chr5:64845137-64844968 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 12-183 |
| Cow position: | chr5:4165763-4165928 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 99, 40 |
| Conread position: | 12-183 |
| Cow position: | chr5:7042373-7042542 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 27, 39 |
| Conread position: | 12-183 |
| Cow position: | chr5:50599190-50599358 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-190 |
| Cow position: | chr5:46671736-46671912 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-191 |
| Cow position: | chr5:2917593-2917770 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 12-191 |
| Cow position: | chr5:5715955-5715780 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 99, 38 |
| Conread position: | 12-191 |
| Cow position: | chr5:7175429-7175607 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 75, 38 |
| Conread position: | 12-191 |
| Cow position: | chr5:7498854-7498676 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 71, 38 |
| Conread position: | 12-191 |
| Cow position: | chr5:8178265-8178443 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-191 |
| Cow position: | chr5:10853703-10853525 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-191 |
| Cow position: | chr5:21188065-21188243 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-191 |
| Cow position: | chr5:29742430-29742252 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-191 |
| Cow position: | chr5:30582457-30582635 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 38 |
| Conread position: | 12-191 |
| Cow position: | chr5:34708900-34709078 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-191 |
| Cow position: | chr5:35180258-35180438 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 40 |
| Conread position: | 12-191 |
| Cow position: | chr5:37384404-37384227 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 12-191 |
| Cow position: | chr5:40828248-40828071 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 69, 36 |
| Conread position: | 12-191 |
| Cow position: | chr5:42743922-42744099 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 90, 38 |
| Conread position: | 12-191 |
| Cow position: | chr5:45941866-45941690 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 12-191 |
| Cow position: | chr5:46626146-46625969 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 66, 38 |
| Conread position: | 12-191 |
| Cow position: | chr5:46707768-46707945 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 12-191 |
| Cow position: | chr5:49117220-49117042 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 71, 40 |
| Conread position: | 12-191 |
| Cow position: | chr5:55631195-55631373 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 12-191 |
| Cow position: | chr5:58770741-58770563 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-192 |
| Cow position: | chr5:6219075-6219252 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 12-192 |
| Cow position: | chr5:10921976-10922155 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-192 |
| Cow position: | chr5:56442389-56442567 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-192 |
| Cow position: | chr5:64061458-64061637 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-197 |
| Cow position: | chr5:51502016-51502198 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-203 |
| Cow position: | chr5:34559277-34559466 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 12-203 |
| Cow position: | chr5:34669958-34669766 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 12-210 |
| Cow position: | chr5:17645950-17645749 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 12-630 |
| Cow position: | chr5:32697660-32697041 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 12-662 |
| Cow position: | chr5:16100429-16099791 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 9 |
| Conread position: | 12-735 |
| Cow position: | chr5:16085680-16084940 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 42 |
| Conread position: | 13-182 |
| Cow position: | chr5:58353339-58353505 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 37 |
| Conread position: | 13-183 |
| Cow position: | chr5:48574695-48574526 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 14-189 |
| Cow position: | chr5:10262143-10261970 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 38 |
| Conread position: | 17-177 |
| Cow position: | chr5:28947275-28947110 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 17-180 |
| Cow position: | chr5:8529784-8529943 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 17-180 |
| Cow position: | chr5:52041348-52041191 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 33 |
| Conread position: | 17-180 |
| Cow position: | chr5:72007757-72007595 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 17-180 |
| Cow position: | chr5:72046527-72046366 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 17-181 |
| Cow position: | chr5:73485750-73485587 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-182 |
| Cow position: | chr5:5924841-5924677 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-182 |
| Cow position: | chr5:6572112-6571951 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 94, 33 |
| Conread position: | 17-182 |
| Cow position: | chr5:32964924-32964760 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 35 |
| Conread position: | 17-182 |
| Cow position: | chr5:49565706-49565864 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 94, 33 |
| Conread position: | 17-183 |
| Cow position: | chr5:53834788-53834953 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-190 |
| Cow position: | chr5:39749306-39749134 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-190 |
| Cow position: | chr5:47560425-47560252 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 33 |
| Conread position: | 17-191 |
| Cow position: | chr5:280044-279871 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-191 |
| Cow position: | chr5:14543165-14542992 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-191 |
| Cow position: | chr5:35207378-35207550 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 17-191 |
| Cow position: | chr5:47854963-47855135 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 73, 33 |
| Conread position: | 17-191 |
| Cow position: | chr5:52829650-52829479 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 17-191 |
| Cow position: | chr5:54337038-54337211 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 17-192 |
| Cow position: | chr5:4015736-4015562 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 64, 34 |
| Conread position: | 17-192 |
| Cow position: | chr5:4683364-4683191 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 17-192 |
| Cow position: | chr5:4753997-4753823 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-192 |
| Cow position: | chr5:5106360-5106533 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 17-192 |
| Cow position: | chr5:6585318-6585144 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 17-192 |
| Cow position: | chr5:18118839-18118665 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-192 |
| Cow position: | chr5:18667443-18667617 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-192 |
| Cow position: | chr5:29256078-29255904 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-192 |
| Cow position: | chr5:39363008-39363182 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-192 |
| Cow position: | chr5:44275731-44275905 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-192 |
| Cow position: | chr5:45179711-45179537 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-192 |
| Cow position: | chr5:53075734-53075560 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-192 |
| Cow position: | chr5:67813998-67814172 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 17-205 |
| Cow position: | chr5:33536752-33536936 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 151, 33 |
| Conread position: | 17-735 |
| Cow position: | chr5:67654462-67655177 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 33 |
| Conread position: | 18-175 |
| Cow position: | chr5:24643733-24643580 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 93, 33 |
| Conread position: | 18-183 |
| Cow position: | chr5:6671032-6670877 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 93, 40 |
| Conread position: | 18-191 |
| Cow position: | chr5:71456909-71456740 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 60, 33 |
| Conread position: | 19-191 |
| Cow position: | chr5:411581-411410 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 19-192 |
| Cow position: | chr5:39448408-39448237 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 19-208 |
| Cow position: | chr5:54454634-54454820 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 19-679 |
| Cow position: | chr5:54088854-54089516 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 31 |
| Conread position: | 22-175 |
| Cow position: | chr5:41608377-41608528 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 67, 30 |
| Conread position: | 25-735 |
| Cow position: | chr5:26466762-26467479 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 252 |
| Conread position: | 33-192 |
| Cow position: | chr5:31217244-31217402 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 36-182 |
| Cow position: | chr5:54868371-54868516 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 55-191 |
| Cow position: | chr5:65593065-65593203 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 23, 130 |
| Conread position: | 59-179 |
| Cow position: | chr5:36406328-36406453 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 59-183 |
| Cow position: | chr5:25496236-25496108 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 59-191 |
| Cow position: | chr5:46797073-46797208 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 25, 128 |
| Conread position: | 65-326 |
| Cow position: | chr5:6986164-6985908 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 17, 98 |
| Conread position: | 80-193 |
| Cow position: | chr5:72172199-72172313 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 187-736 |
| Cow position: | chr5:39448208-39447670 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 214-735 |
| Cow position: | chr5:5937676-5938184 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 69 |
| Conread position: | 214-774 |
| Cow position: | chr5:37758471-37757904 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 73 |
| Conread position: | 214-777 |
| Cow position: | chr5:56467052-56467611 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 27 |
| Conread position: | 216-735 |
| Cow position: | chr5:26094811-26094310 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 71 |
| Conread position: | 216-735 |
| Cow position: | chr5:72901899-72902418 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 71 |
| Conread position: | 241-779 |
| Cow position: | chr5:23006733-23006201 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 46 |
| Conread position: | 254-777 |
| Cow position: | chr5:41523400-41522882 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 33 |
| Conread position: | 310-780 |
| Cow position: | chr5:34115079-34115569 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 454 |
| Conread position: | 328-735 |
| Cow position: | chr5:6044744-6045147 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 166 |
| Conread position: | 386-780 |
| Cow position: | chr5:65593391-65593796 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 109 |
| Conread position: | 436-736 |
| Cow position: | chr5:29504670-29504970 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 29 |
| Conread position: | 464-733 |
| Cow position: | chr5:61030639-61030371 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 208, 178 |
| Conread position: | 505-733 |
| Cow position: | chr5:34442162-34441934 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 177, 134 |
| Conread position: | 508-733 |
| Cow position: | chr5:48238458-48238233 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 174, 67 |
| Conread position: | 549-779 |
| Cow position: | chr5:27103116-27102876 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 133, 47 |
Show alignments to all cow chromosomes.