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Cow genome map

           
Conread name:
           
Pig4-TMW8018L06
        

               
Conread position:
               
1-182
               

               
Cow position:
               
chrX:10412891-10412700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 173
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chrX:15151579-15151391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 49
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chrX:26622722-26622548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chrX:18247456-18247637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chrX:25282406-25282208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
5-318
               

               
Cow position:
               
chrX:20792245-20792550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
6-180
               

               
Cow position:
               
chrX:16465402-16465575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
6-180
               

               
Cow position:
               
chrX:18244086-18244259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
6-182
               

               
Cow position:
               
chrX:23022413-23022589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
6-182
               

               
Cow position:
               
chrX:29880176-29880004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
6-191
               

               
Cow position:
               
chrX:12178778-12178964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
6-191
               

               
Cow position:
               
chrX:12465133-12465317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
6-191
               

               
Cow position:
               
chrX:24316926-24317106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
6-194
               

               
Cow position:
               
chrX:11991053-11990862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 55
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chrX:17889760-17889400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
7-183
               

               
Cow position:
               
chrX:620174-619987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
7-190
               

               
Cow position:
               
chrX:41734095-41733907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
7-191
               

               
Cow position:
               
chrX:35388817-35388634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
12-164
               

               
Cow position:
               
chrX:41885071-41884921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-178
               

               
Cow position:
               
chrX:42222666-42222501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
12-179
               

               
Cow position:
               
chrX:29099524-29099690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
12-181
               

               
Cow position:
               
chrX:16702778-16702946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-181
               

               
Cow position:
               
chrX:18193797-18193965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-181
               

               
Cow position:
               
chrX:24442132-24441964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-181
               

               
Cow position:
               
chrX:27318338-27318506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-181
               

               
Cow position:
               
chrX:38150795-38150963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-182
               

               
Cow position:
               
chrX:3406236-3406065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
12-182
               

               
Cow position:
               
chrX:6766628-6766459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
12-182
               

               
Cow position:
               
chrX:23341884-23341715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 40
               

               
Conread position:
               
12-182
               

               
Cow position:
               
chrX:23387431-23387262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
66, 38
               

               
Conread position:
               
12-182
               

               
Cow position:
               
chrX:23395714-23395883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
66, 38
               

               
Conread position:
               
12-182
               

               
Cow position:
               
chrX:24483256-24483091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
12-182
               

               
Cow position:
               
chrX:24588627-24588460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
12-182
               

               
Cow position:
               
chrX:26531080-26531249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-182
               

               
Cow position:
               
chrX:29288105-29288269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
12-182
               

               
Cow position:
               
chrX:32584824-32584655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-183
               

               
Cow position:
               
chrX:40560433-40560264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
12-190
               

               
Cow position:
               
chrX:39559249-39559079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 9
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:150579-150755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:865503-865681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:1056280-1056101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:1550072-1550250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:7551694-7551516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:11950381-11950201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:14162299-14162477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:16021269-16021092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:16525897-16526075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:16782387-16782565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:20953640-20953818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:21226584-21226762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:21582550-21582728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:22118387-22118211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:22538926-22538748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:23452340-23452160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:23572710-23572531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:27095236-27095414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:27590923-27590745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:27977727-27977549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
72, 40
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:28624653-28624476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:29892194-29892372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:30229006-30228829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chrX:31201949-31202126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-192
               

               
Cow position:
               
chrX:11976339-11976160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-192
               

               
Cow position:
               
chrX:12310282-12310104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
12-192
               

               
Cow position:
               
chrX:15140429-15140251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
12-192
               

               
Cow position:
               
chrX:16278760-16278938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
12-192
               

               
Cow position:
               
chrX:18898542-18898363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
12-192
               

               
Cow position:
               
chrX:20674975-20675152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-192
               

               
Cow position:
               
chrX:23986357-23986536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
69, 40
               

               
Conread position:
               
12-192
               

               
Cow position:
               
chrX:30455514-30455336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-192
               

               
Cow position:
               
chrX:31978734-31978555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-192
               

               
Cow position:
               
chrX:39293111-39292932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-194
               

               
Cow position:
               
chrX:15113779-15113960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
12-206
               

               
Cow position:
               
chrX:45374001-45373806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
13-182
               

               
Cow position:
               
chrX:12289830-12289997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
13-182
               

               
Cow position:
               
chrX:35847334-35847501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
13-182
               

               
Cow position:
               
chrX:40070503-40070335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
13-191
               

               
Cow position:
               
chrX:36839813-36839990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
13-192
               

               
Cow position:
               
chrX:35609085-35609272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
13-681
               

               
Cow position:
               
chrX:34221873-34222549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
14-180
               

               
Cow position:
               
chrX:18488605-18488440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 38
               

               
Conread position:
               
14-180
               

               
Cow position:
               
chrX:38935531-38935696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
14-182
               

               
Cow position:
               
chrX:7805490-7805655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
68, 36
               

               
Conread position:
               
14-182
               

               
Cow position:
               
chrX:41791606-41791439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
14-191
               

               
Cow position:
               
chrX:4482071-4482240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
14-192
               

               
Cow position:
               
chrX:19929543-19929720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
15-182
               

               
Cow position:
               
chrX:35937965-35937800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
15-208
               

               
Cow position:
               
chrX:20790430-20790241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
16-191
               

               
Cow position:
               
chrX:13414694-13414522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
17-175
               

               
Cow position:
               
chrX:2008586-2008434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
17-180
               

               
Cow position:
               
chrX:3155471-3155311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
17-180
               

               
Cow position:
               
chrX:11744380-11744541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
17-180
               

               
Cow position:
               
chrX:32643598-32643760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-181
               

               
Cow position:
               
chrX:14462427-14462589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-181
               

               
Cow position:
               
chrX:15260507-15260344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-181
               

               
Cow position:
               
chrX:35287538-35287700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
17-181
               

               
Cow position:
               
chrX:37134521-37134358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-182
               

               
Cow position:
               
chrX:26508340-26508501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
17-182
               

               
Cow position:
               
chrX:40365633-40365469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
17-182
               

               
Cow position:
               
chrX:41847418-41847254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-183
               

               
Cow position:
               
chrX:4751254-4751092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
94, 33
               

               
Conread position:
               
17-190
               

               
Cow position:
               
chrX:33803883-33803711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-190
               

               
Cow position:
               
chrX:41527402-41527230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chrX:2524620-2524448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chrX:21592403-21592575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chrX:22811002-22811175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chrX:23415583-23415411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chrX:24109492-24109321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chrX:25459527-25459353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chrX:25817717-25817538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chrX:27450937-27450765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chrX:27704711-27704883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 35
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chrX:28866900-28866727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chrX:28879481-28879309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
71, 33
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chrX:31261521-31261349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chrX:31372574-31372746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chrX:31728580-31728744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
94, 33
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chrX:38852273-38852444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-191
               

               
Cow position:
               
chrX:40693617-40693445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
63, 33
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chrX:671881-671707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chrX:2103517-2103691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chrX:3360933-3361107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chrX:4406995-4407168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chrX:5124247-5124073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chrX:6372292-6372466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chrX:7484919-7485093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chrX:10445303-10445129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chrX:14597958-14598132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chrX:20356883-20356709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chrX:22077230-22077056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chrX:30199880-30199706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chrX:34518838-34519012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chrX:34761178-34761352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 33
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chrX:38961738-38961564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chrX:40581051-40580877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-193
               

               
Cow position:
               
chrX:1617122-1616947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
17-193
               

               
Cow position:
               
chrX:39939641-39939467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
17-194
               

               
Cow position:
               
chrX:34564207-34564378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
95, 11
               

               
Conread position:
               
17-195
               

               
Cow position:
               
chrX:37118021-37118196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
17-202
               

               
Cow position:
               
chrX:18455658-18455474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
17-242
               

               
Cow position:
               
chrX:20503753-20503972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
18-171
               

               
Cow position:
               
chrX:8144765-8144616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
93, 34
               

               
Conread position:
               
19-191
               

               
Cow position:
               
chrX:30089932-30089761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
20-191
               

               
Cow position:
               
chrX:4905872-4905705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
20-291
               

               
Cow position:
               
chrX:22819193-22819477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
32-190
               

               
Cow position:
               
chrX:19657624-19657781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
62-182
               

               
Cow position:
               
chrX:40788287-40788410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
87-331
               

               
Cow position:
               
chrX:18241585-18241828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 165
               

               
Conread position:
               
104-627
               

               
Cow position:
               
chrX:19128019-19127473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 189
               

               
Conread position:
               
145-740
               

               
Cow position:
               
chrX:11073926-11073323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 24
               

               
Conread position:
               
214-781
               

               
Cow position:
               
chrX:34564648-34565201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
214-785
               

               
Cow position:
               
chrX:39559020-39558425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 184
               

               
Conread position:
               
218-735
               

               
Cow position:
               
chrX:31261284-31260769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
270-742
               

               
Cow position:
               
chrX:42086265-42086730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
280-735
               

               
Cow position:
               
chrX:2524325-2523869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 242
               

               
Conread position:
               
298-735
               

               
Cow position:
               
chrX:11655512-11655949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 51
               

               
Conread position:
               
304-735
               

               
Cow position:
               
chrX:26626262-26625816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 235
               

               
Conread position:
               
315-779
               

               
Cow position:
               
chrX:28110941-28111422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 117
               

               
Conread position:
               
337-768
               

               
Cow position:
               
chrX:4123304-4123737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 47
               

               
Conread position:
               
350-735
               

               
Cow position:
               
chrX:31949446-31949070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 79
               

               
Conread position:
               
371-773
               

               
Cow position:
               
chrX:12437728-12437340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
310, 22
               

               
Conread position:
               
427-776
               

               
Cow position:
               
chrX:28847322-28846967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 193
               

               
Conread position:
               
443-735
               

               
Cow position:
               
chrX:6654741-6654441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 157
               

               
Conread position:
               
457-735
               

               
Cow position:
               
chrX:8796841-8797108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
224, 49
               

               
Conread position:
               
481-735
               

               
Cow position:
               
chrX:7718466-7718715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
182, 55
               

               
Conread position:
               
526-736
               

               
Cow position:
               
chrX:26883496-26883272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
118, 102
               

               
Conread position:
               
538-737
               

               
Cow position:
               
chrX:40365130-40364930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 56
               

               
Conread position:
               
558-731
               

               
Cow position:
               
chrX:33639653-33639828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 33
               

               
Conread position:
               
596-776
               

               
Cow position:
               
chrX:35413353-35413534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 45
               
Show alignments to all cow chromosomes.