Cow genome map
| Conread name: | Pig4-TMW8019J06 |
| Conread position: | 3-133 |
| Cow position: | chr1:98613053-98613180 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 8-196 |
| Cow position: | chr1:90423272-90423082 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 33, 91 |
| Conread position: | 10-176 |
| Cow position: | chr1:70282751-70282916 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 10-177 |
| Cow position: | chr1:41696870-41697040 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 82 |
| Conread position: | 10-189 |
| Cow position: | chr1:66355893-66355722 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 170, 20 |
| Conread position: | 10-196 |
| Cow position: | chr1:35170152-35170336 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 127 |
| Conread position: | 11-180 |
| Cow position: | chr1:15691154-15691318 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 11-186 |
| Cow position: | chr1:22777733-22777555 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 64, 163 |
| Conread position: | 11-188 |
| Cow position: | chr1:30413404-30413587 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 78, 45 |
| Conread position: | 11-189 |
| Cow position: | chr1:23099715-23099894 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 11, 79 |
| Conread position: | 11-189 |
| Cow position: | chr1:58889479-58889299 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 106, 29 |
| Conread position: | 11-192 |
| Cow position: | chr1:53039883-53039707 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 95, 56 |
| Conread position: | 11-192 |
| Cow position: | chr1:89548006-89548188 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 11-196 |
| Cow position: | chr1:5162236-5162046 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 11-196 |
| Cow position: | chr1:89443660-89443480 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 165, 98 |
| Conread position: | 11-197 |
| Cow position: | chr1:64189320-64189500 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 165, 36 |
| Conread position: | 11-203 |
| Cow position: | chr1:16973022-16972834 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 11-204 |
| Cow position: | chr1:2765232-2765420 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 65, 37 |
| Conread position: | 11-204 |
| Cow position: | chr1:21934355-21934167 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 79, 27 |
| Conread position: | 11-204 |
| Cow position: | chr1:32244588-32244389 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 11-204 |
| Cow position: | chr1:81161828-81162009 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 12-186 |
| Cow position: | chr1:71135970-71136141 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 161, 84 |
| Conread position: | 12-203 |
| Cow position: | chr1:69415900-69415704 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 12-204 |
| Cow position: | chr1:95765271-95765084 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 15-192 |
| Cow position: | chr1:2997762-2997943 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 17-197 |
| Cow position: | chr1:97620014-97619832 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 153, 92 |
| Conread position: | 21-167 |
| Cow position: | chr1:76850898-76850754 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 28 |
| Conread position: | 21-169 |
| Cow position: | chr1:67994960-67995105 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 69, 14 |
| Conread position: | 21-177 |
| Cow position: | chr1:6881397-6881244 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 21-177 |
| Cow position: | chr1:40497406-40497553 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 147, 86 |
| Conread position: | 21-177 |
| Cow position: | chr1:49131295-49131134 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 21-177 |
| Cow position: | chr1:85651934-85651787 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 127, 28 |
| Conread position: | 21-179 |
| Cow position: | chr1:17291816-17291661 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 21-179 |
| Cow position: | chr1:50634579-50634418 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 152 |
| Conread position: | 21-179 |
| Cow position: | chr1:78750864-78750703 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-182 |
| Cow position: | chr1:81277375-81277215 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 68, 7 |
| Conread position: | 21-185 |
| Cow position: | chr1:13195598-13195431 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 20, 92 |
| Conread position: | 21-186 |
| Cow position: | chr1:69004219-69004386 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 118 |
| Conread position: | 21-186 |
| Cow position: | chr1:80973787-80973615 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 21-186 |
| Cow position: | chr1:84015698-84015867 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 22, 154 |
| Conread position: | 21-186 |
| Cow position: | chr1:94526321-94526490 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 22 |
| Conread position: | 21-188 |
| Cow position: | chr1:31871247-31871419 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-188 |
| Cow position: | chr1:51836398-51836563 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 21-189 |
| Cow position: | chr1:10719655-10719487 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 82, 75 |
| Conread position: | 21-189 |
| Cow position: | chr1:93110795-93110626 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 21-191 |
| Cow position: | chr1:101812452-101812280 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 21-192 |
| Cow position: | chr1:765746-765570 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 21-192 |
| Cow position: | chr1:5061849-5062024 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 21-192 |
| Cow position: | chr1:61736928-61737092 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 21-192 |
| Cow position: | chr1:84235504-84235335 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 21-195 |
| Cow position: | chr1:97786010-97786176 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 90, 14 |
| Conread position: | 21-196 |
| Cow position: | chr1:5278590-5278412 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 21-196 |
| Cow position: | chr1:6795107-6794923 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-196 |
| Cow position: | chr1:7143022-7142847 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-196 |
| Cow position: | chr1:8192903-8192731 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 91, 33 |
| Conread position: | 21-196 |
| Cow position: | chr1:41735798-41735622 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 66 |
| Conread position: | 21-196 |
| Cow position: | chr1:58825375-58825543 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 159, 35 |
| Conread position: | 21-196 |
| Cow position: | chr1:85411406-85411579 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 152, 28 |
| Conread position: | 21-197 |
| Cow position: | chr1:62732402-62732580 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 28, 73 |
| Conread position: | 21-199 |
| Cow position: | chr1:14528373-14528191 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 106 |
| Conread position: | 21-201 |
| Cow position: | chr1:64939116-64938934 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 45 |
| Conread position: | 21-202 |
| Cow position: | chr1:53411083-53410910 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 21-203 |
| Cow position: | chr1:13455970-13456148 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 33, 104 |
| Conread position: | 21-204 |
| Cow position: | chr1:32341381-32341201 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 21-204 |
| Cow position: | chr1:78791479-78791298 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 21-204 |
| Cow position: | chr1:80764708-80764529 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 21-204 |
| Cow position: | chr1:99807901-99807710 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-205 |
| Cow position: | chr1:20422379-20422195 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 21-205 |
| Cow position: | chr1:56643762-56643579 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 15, 67 |
| Conread position: | 22-164 |
| Cow position: | chr1:75198972-75199110 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 22-179 |
| Cow position: | chr1:9870025-9869862 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 22-196 |
| Cow position: | chr1:25793611-25793433 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 22-213 |
| Cow position: | chr1:70534106-70533920 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 146, 95 |
| Conread position: | 23-147 |
| Cow position: | chr1:31414130-31414009 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 23-172 |
| Cow position: | chr1:95215357-95215205 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 90 |
| Conread position: | 23-175 |
| Cow position: | chr1:57900910-57900757 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 61 |
| Conread position: | 23-175 |
| Cow position: | chr1:89082936-89083093 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 88 |
| Conread position: | 23-177 |
| Cow position: | chr1:20667913-20667759 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 68 |
| Conread position: | 23-177 |
| Cow position: | chr1:68817970-68817817 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 23-181 |
| Cow position: | chr1:51654239-51654397 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 60, 86 |
| Conread position: | 23-182 |
| Cow position: | chr1:91816945-91816787 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 23-186 |
| Cow position: | chr1:8869831-8869671 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 154, 68 |
| Conread position: | 23-188 |
| Cow position: | chr1:4290987-4291153 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 87 |
| Conread position: | 23-189 |
| Cow position: | chr1:45638312-45638481 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 16, 144 |
| Conread position: | 23-192 |
| Cow position: | chr1:56408442-56408614 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 20, 103 |
| Conread position: | 23-192 |
| Cow position: | chr1:82884561-82884391 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 87, 68 |
| Conread position: | 23-193 |
| Cow position: | chr1:7800437-7800613 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 23-194 |
| Cow position: | chr1:43352828-43352658 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 49, 56 |
| Conread position: | 23-194 |
| Cow position: | chr1:95467512-95467333 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 20, 147 |
| Conread position: | 23-195 |
| Cow position: | chr1:42398368-42398194 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 84, 61 |
| Conread position: | 23-195 |
| Cow position: | chr1:82443628-82443457 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 86 |
| Conread position: | 23-196 |
| Cow position: | chr1:45535530-45535705 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 89 |
| Conread position: | 23-196 |
| Cow position: | chr1:54478153-54478327 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 154, 87 |
| Conread position: | 23-197 |
| Cow position: | chr1:85783354-85783527 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 153, 104 |
| Conread position: | 23-197 |
| Cow position: | chr1:88529964-88529797 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 23-204 |
| Cow position: | chr1:56477423-56477598 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 151, 14 |
| Conread position: | 23-204 |
| Cow position: | chr1:63504165-63504342 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 13, 71 |
| Conread position: | 23-204 |
| Cow position: | chr1:68763853-68763678 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 24-182 |
| Cow position: | chr1:44506797-44506955 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-192 |
| Cow position: | chr1:76222861-76222695 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 60 |
| Conread position: | 24-194 |
| Cow position: | chr1:59518750-59518918 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 150, 67 |
| Conread position: | 24-195 |
| Cow position: | chr1:97422466-97422298 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 149, 44 |
| Conread position: | 25-175 |
| Cow position: | chr1:101280885-101280740 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 25-182 |
| Cow position: | chr1:37322171-37322014 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 59 |
| Conread position: | 25-187 |
| Cow position: | chr1:102113278-102113111 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 18, 71 |
| Conread position: | 25-193 |
| Cow position: | chr1:77132435-77132602 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 149, 95 |
| Conread position: | 25-195 |
| Cow position: | chr1:99039522-99039358 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 25-196 |
| Cow position: | chr1:57782840-57783006 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 151, 104 |
| Conread position: | 25-196 |
| Cow position: | chr1:73196400-73196233 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 26-193 |
| Cow position: | chr1:4175437-4175272 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 138, 40 |
| Conread position: | 26-195 |
| Cow position: | chr1:43380196-43380027 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 82, 66 |
| Conread position: | 26-195 |
| Cow position: | chr1:80988178-80988348 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 135, 58 |
| Conread position: | 28-195 |
| Cow position: | chr1:96478525-96478696 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 65 |
| Conread position: | 29-192 |
| Cow position: | chr1:101771743-101771900 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 30-195 |
| Cow position: | chr1:90413215-90413380 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 32-218 |
| Cow position: | chr1:25183969-25184151 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 63, 113 |
| Conread position: | 34-173 |
| Cow position: | chr1:29916246-29916386 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 34-194 |
| Cow position: | chr1:63314668-63314830 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 35-159 |
| Cow position: | chr1:70236449-70236324 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 35-176 |
| Cow position: | chr1:44164923-44165063 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 35-186 |
| Cow position: | chr1:26688634-26688483 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 140, 87 |
| Conread position: | 35-187 |
| Cow position: | chr1:77657908-77658060 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 140, 62 |
| Conread position: | 35-188 |
| Cow position: | chr1:63363012-63362866 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 101, 53 |
| Conread position: | 35-196 |
| Cow position: | chr1:38525431-38525590 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 55, 68 |
| Conread position: | 35-202 |
| Cow position: | chr1:70028423-70028592 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 139, 74 |
| Conread position: | 35-204 |
| Cow position: | chr1:75347461-75347631 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 35-204 |
| Cow position: | chr1:82337940-82337770 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 137, 73 |
| Conread position: | 36-189 |
| Cow position: | chr1:52449766-52449616 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 38-182 |
| Cow position: | chr1:21787174-21787316 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 38-196 |
| Cow position: | chr1:74947279-74947119 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 123, 71 |
| Conread position: | 39-192 |
| Cow position: | chr1:9444001-9443851 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 141, 86 |
| Conread position: | 39-203 |
| Cow position: | chr1:46839443-46839610 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 39-204 |
| Cow position: | chr1:53540240-53540397 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 41-194 |
| Cow position: | chr1:43703254-43703405 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 43-186 |
| Cow position: | chr1:46205666-46205809 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 48-177 |
| Cow position: | chr1:29657681-29657809 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 48-211 |
| Cow position: | chr1:38692517-38692680 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-196 |
| Cow position: | chr1:50045661-50045800 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 57-200 |
| Cow position: | chr1:6734327-6734469 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 58-189 |
| Cow position: | chr1:77118670-77118541 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 112, 37 |
| Conread position: | 58-197 |
| Cow position: | chr1:72731902-72732040 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 122, 61 |
| Conread position: | 62-205 |
| Cow position: | chr1:44746733-44746871 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.