Cow genome map
| Conread name: | Pig4-TMW8019J06 |
| Conread position: | 9-189 |
| Cow position: | chr12:28559065-28559246 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 25, 87 |
| Conread position: | 10-217 |
| Cow position: | chr12:18081772-18081579 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 11-185 |
| Cow position: | chr12:18769302-18769127 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 11-195 |
| Cow position: | chr12:18417335-18417525 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 11-195 |
| Cow position: | chr12:25619606-25619418 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 11-196 |
| Cow position: | chr12:20312395-20312216 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 67 |
| Conread position: | 11-202 |
| Cow position: | chr12:5797772-5797588 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 168, 65 |
| Conread position: | 11-204 |
| Cow position: | chr12:41642207-41642394 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 166, 60 |
| Conread position: | 12-196 |
| Cow position: | chr12:6117673-6117859 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 155 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 109 |
| Conread position: | 20-179 |
| Cow position: | chr12:27495786-27495950 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 21-150 |
| Cow position: | chr12:11498281-11498153 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 21-153 |
| Cow position: | chr12:30064726-30064861 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-170 |
| Cow position: | chr12:3212107-3212258 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 21-173 |
| Cow position: | chr12:21862002-21861852 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 102, 40 |
| Conread position: | 21-183 |
| Cow position: | chr12:16851227-16851065 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 155, 98 |
| Conread position: | 21-185 |
| Cow position: | chr12:41979522-41979354 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 159 |
| Conread position: | 21-186 |
| Cow position: | chr12:33457929-33458093 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 152, 16 |
| Conread position: | 21-189 |
| Cow position: | chr12:35807459-35807630 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 22, 64 |
| Conread position: | 21-192 |
| Cow position: | chr12:47800036-47799872 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 150, 20 |
| Conread position: | 21-194 |
| Cow position: | chr12:46143603-46143774 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 69 |
| Conread position: | 21-195 |
| Cow position: | chr12:39753651-39753818 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 21-197 |
| Cow position: | chr12:1487819-1488001 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 21-197 |
| Cow position: | chr12:34103353-34103176 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 39, 35 |
| Conread position: | 21-202 |
| Cow position: | chr12:35984913-35985099 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 24, 158 |
| Conread position: | 21-204 |
| Cow position: | chr12:31198548-31198729 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 40 |
| Conread position: | 21-212 |
| Cow position: | chr12:37394487-37394687 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 63, 168 |
| Conread position: | 21-226 |
| Cow position: | chr12:48405909-48406104 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 184, 71 |
| Conread position: | 23-171 |
| Cow position: | chr12:794334-794490 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 23-180 |
| Cow position: | chr12:28011115-28010959 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 148, 85 |
| Conread position: | 23-184 |
| Cow position: | chr12:34089620-34089786 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 23-195 |
| Cow position: | chr12:2711276-2711451 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 23-195 |
| Cow position: | chr12:12031050-12030875 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 23-195 |
| Cow position: | chr12:38512058-38511883 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 75, 61 |
| Conread position: | 23-197 |
| Cow position: | chr12:35354569-35354746 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 86 |
| Conread position: | 23-204 |
| Cow position: | chr12:23379355-23379540 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 28, 145 |
| Conread position: | 23-204 |
| Cow position: | chr12:27038984-27038791 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 23-204 |
| Cow position: | chr12:29770789-29770610 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 24-196 |
| Cow position: | chr12:38484618-38484434 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 25-171 |
| Cow position: | chr12:15622669-15622514 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 25-195 |
| Cow position: | chr12:6121141-6121316 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 25-195 |
| Cow position: | chr12:17702442-17702273 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 27-204 |
| Cow position: | chr12:8869092-8868913 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 16, 84 |
| Conread position: | 28-196 |
| Cow position: | chr12:11696464-11696640 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 29-204 |
| Cow position: | chr12:21828878-21829049 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 82 |
| Conread position: | 30-196 |
| Cow position: | chr12:25312581-25312414 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 82, 119 |
| Conread position: | 30-197 |
| Cow position: | chr12:12939135-12938965 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 32-196 |
| Cow position: | chr12:1223552-1223386 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 34-181 |
| Cow position: | chr12:17881657-17881801 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 34-196 |
| Cow position: | chr12:31429775-31429614 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 35-165 |
| Cow position: | chr12:26868999-26868869 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 66, 74 |
| Conread position: | 35-177 |
| Cow position: | chr12:3757242-3757100 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 55, 17 |
| Conread position: | 35-204 |
| Cow position: | chr12:32413307-32413476 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 103, 96 |
| Conread position: | 38-192 |
| Cow position: | chr12:3906271-3906425 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 52 |
| Conread position: | 63-195 |
| Cow position: | chr12:41094000-41093870 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 7, 47 |
Show alignments to all cow chromosomes.