Cow genome map

Conread name: Pig4-TMW8019J06

Conread position: 1-190
Cow position: chr17:26084878-26085060 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 3-171
Cow position: chr17:35990942-35991108 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 8-177
Cow position: chr17:18494668-18494499 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 8-195
Cow position: chr17:21312957-21312777 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 8-199
Cow position: chr17:25755632-25755832 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 9-169
Cow position: chr17:13143841-13143682 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 9-175
Cow position: chr17:15985199-15985364 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 9-204
Cow position: chr17:8926371-8926172 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 10-165
Cow position: chr17:16307230-16307383 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 10-191
Cow position: chr17:10634207-10634030 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 11-181
Cow position: chr17:1783758-1783585 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 89

Conread position: 11-185
Cow position: chr17:8861334-8861158 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 122

Conread position: 11-189
Cow position: chr17:9293600-9293781 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 11-192
Cow position: chr17:37775972-37776149 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 44, 32

Conread position: 11-192
Cow position: chr17:37778766-37778589 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 44, 32

Conread position: 11-204
Cow position: chr17:18245926-18246122 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 11-206
Cow position: chr17:8279858-8279663 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 159, 186

Conread position: 11-213
Cow position: chr17:3945349-3945145 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 140

Conread position: 11-218
Cow position: chr17:11837273-11837478 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 34, 39

Conread position: 12-185
Cow position: chr17:27819152-27819328 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 96

Conread position: 12-196
Cow position: chr17:20216023-20216201 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 130, 23

Conread position: 16-171
Cow position: chr17:1094664-1094505 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 106

Conread position: 20-182
Cow position: chr17:4141018-4140863 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 116

Conread position: 21-155
Cow position: chr17:36817803-36817936 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 21-161
Cow position: chr17:21419293-21419437 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 21-176
Cow position: chr17:38276552-38276702 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 21-177
Cow position: chr17:33999183-33999032 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 21-178
Cow position: chr17:25740811-25740971 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 21-179
Cow position: chr17:1653830-1653672 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 17

Conread position: 21-179
Cow position: chr17:39012579-39012744 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 98

Conread position: 21-184
Cow position: chr17:144314-144154 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 47

Conread position: 21-186
Cow position: chr17:25707816-25707983 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 72

Conread position: 21-189
Cow position: chr17:19891476-19891650 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 22, 124

Conread position: 21-194
Cow position: chr17:36217324-36217148 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 81

Conread position: 21-196
Cow position: chr17:32457719-32457532 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 21-196
Cow position: chr17:34864433-34864608 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 71, 133

Conread position: 21-197
Cow position: chr17:10271352-10271530 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 21, 64

Conread position: 21-199
Cow position: chr17:5041815-5041643 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 21-200
Cow position: chr17:27697836-27697663 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 154, 28

Conread position: 21-204
Cow position: chr17:37342625-37342445 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 67

Conread position: 21-213
Cow position: chr17:2079621-2079810 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 102

Conread position: 21-214
Cow position: chr17:7595018-7595222 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 46

Conread position: 22-182
Cow position: chr17:3270177-3270331 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 22-182
Cow position: chr17:21260089-21259926 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 149

Conread position: 23-171
Cow position: chr17:5246758-5246902 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 23-177
Cow position: chr17:1061200-1061043 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 73

Conread position: 23-180
Cow position: chr17:18824653-18824812 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 131
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 84, 0

Conread position: 23-181
Cow position: chr17:908609-908764 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 55

Conread position: 23-182
Cow position: chr17:27780717-27780875 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 137, 32

Conread position: 23-183
Cow position: chr17:20990331-20990174 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 68

Conread position: 23-188
Cow position: chr17:38613109-38613277 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 75, 86

Conread position: 23-192
Cow position: chr17:25181286-25181112 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 102

Conread position: 23-193
Cow position: chr17:20932192-20932361 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 83

Conread position: 23-194
Cow position: chr17:33271824-33271649 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 54, 37

Conread position: 23-195
Cow position: chr17:11618443-11618620 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 53

Conread position: 23-195
Cow position: chr17:12059228-12059060 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 23-195
Cow position: chr17:20993176-20993005 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 95, 7

Conread position: 23-195
Cow position: chr17:24587481-24587656 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 91

Conread position: 23-195
Cow position: chr17:31037517-31037345 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 57

Conread position: 23-196
Cow position: chr17:35212229-35212403 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 102, 61

Conread position: 23-196
Cow position: chr17:37415037-37414860 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 146
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 20, 166

Conread position: 23-204
Cow position: chr17:5896048-5895869 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 79

Conread position: 23-204
Cow position: chr17:11171658-11171834 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 42

Conread position: 23-204
Cow position: chr17:12536605-12536424 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 148, 85

Conread position: 24-186
Cow position: chr17:23879962-23879801 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 15, 88

Conread position: 25-170
Cow position: chr17:19756035-19755891 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 31

Conread position: 25-177
Cow position: chr17:13672205-13672052 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 143, 83

Conread position: 25-182
Cow position: chr17:7890314-7890151 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 25-189
Cow position: chr17:25590371-25590207 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 155

Conread position: 25-195
Cow position: chr17:32027592-32027421 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 82, 5

Conread position: 25-204
Cow position: chr17:6624123-6624297 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 84

Conread position: 26-181
Cow position: chr17:34628615-34628458 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 26-194
Cow position: chr17:11278167-11277997 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 84

Conread position: 27-161
Cow position: chr17:17452736-17452604 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 31-197
Cow position: chr17:6848676-6848839 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 78

Conread position: 32-196
Cow position: chr17:21373553-21373710 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 34-181
Cow position: chr17:28539903-28540049 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 75

Conread position: 34-193
Cow position: chr17:17410163-17410323 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 47

Conread position: 35-193
Cow position: chr17:6328987-6329145 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 75

Conread position: 35-194
Cow position: chr17:7614503-7614348 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 138, 65

Conread position: 35-196
Cow position: chr17:28359720-28359876 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 145, 97

Conread position: 35-196
Cow position: chr17:37138636-37138796 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 14

Conread position: 35-204
Cow position: chr17:23803333-23803501 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 144, 0

Conread position: 39-196
Cow position: chr17:26162547-26162388 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 133, 34

Conread position: 45-186
Cow position: chr17:3042358-3042500 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 132, 0

Conread position: 47-196
Cow position: chr17:10423970-10424115 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 132, 50

Conread position: 47-204
Cow position: chr17:10308142-10307987 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 131

Conread position: 49-177
Cow position: chr17:25340265-25340134 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 82

Conread position: 61-204
Cow position: chr17:5787933-5787792 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 63-192
Cow position: chr17:20608446-20608578 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 71-181
Cow position: chr17:25145409-25145300 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 74-192
Cow position: chr17:27257318-27257198 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 97-204
Cow position: chr17:4085692-4085799 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 98

Show alignments to all cow chromosomes.