Cow genome map
| Conread name: | Pig4-TMW8019J06 |
| Conread position: | 3-185 |
| Cow position: | chr22:14118776-14118959 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 40, 6 |
| Conread position: | 5-177 |
| Cow position: | chr22:4028607-4028785 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 84 |
| Conread position: | 8-194 |
| Cow position: | chr22:3064410-3064224 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 116 |
| Conread position: | 9-177 |
| Cow position: | chr22:4650986-4651153 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 10-172 |
| Cow position: | chr22:8398009-8397848 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 100, 80 |
| Conread position: | 10-174 |
| Cow position: | chr22:19207775-19207944 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 31, 145 |
| Conread position: | 10-183 |
| Cow position: | chr22:19653179-19653007 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 10-195 |
| Cow position: | chr22:1484668-1484851 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 160, 80 |
| Conread position: | 10-204 |
| Cow position: | chr22:44924256-44924060 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 11-184 |
| Cow position: | chr22:1237-1408 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 42 |
| Conread position: | 11-186 |
| Cow position: | chr22:13187687-13187861 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 168, 118 |
| Conread position: | 11-196 |
| Cow position: | chr22:23581029-23580850 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 165, 107 |
| Conread position: | 11-196 |
| Cow position: | chr22:44835449-44835638 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 52 |
| Conread position: | 11-204 |
| Cow position: | chr22:19738771-19738572 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 11-204 |
| Cow position: | chr22:37554819-37554622 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 12-177 |
| Cow position: | chr22:15398770-15398603 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 12-196 |
| Cow position: | chr22:2913086-2913269 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 47 |
| Conread position: | 12-217 |
| Cow position: | chr22:33918091-33917885 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 103, 60 |
| Conread position: | 20-195 |
| Cow position: | chr22:11130687-11130858 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 69, 10 |
| Conread position: | 21-152 |
| Cow position: | chr22:13274288-13274417 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 21-174 |
| Cow position: | chr22:4161796-4161642 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 21-176 |
| Cow position: | chr22:15428628-15428477 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 21-177 |
| Cow position: | chr22:19592230-19592395 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-180 |
| Cow position: | chr22:41684468-41684312 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 93, 122 |
| Conread position: | 21-186 |
| Cow position: | chr22:5622902-5622735 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 21-189 |
| Cow position: | chr22:9466432-9466596 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 110, 31 |
| Conread position: | 21-192 |
| Cow position: | chr22:22997296-22997464 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 21-195 |
| Cow position: | chr22:2476394-2476218 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 21-196 |
| Cow position: | chr22:7302026-7301846 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 155 |
| Conread position: | 21-196 |
| Cow position: | chr22:11257918-11257754 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 155, 74 |
| Conread position: | 21-196 |
| Cow position: | chr22:26376085-26376260 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 22, 90 |
| Conread position: | 21-197 |
| Cow position: | chr22:39452405-39452591 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 21-198 |
| Cow position: | chr22:42605445-42605628 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 21-203 |
| Cow position: | chr22:7979528-7979705 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 143, 20 |
| Conread position: | 21-203 |
| Cow position: | chr22:26057207-26057377 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 155, 35 |
| Conread position: | 21-204 |
| Cow position: | chr22:23010122-23009939 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 76 |
| Conread position: | 21-204 |
| Cow position: | chr22:26184345-26184163 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 21-204 |
| Cow position: | chr22:39293930-39293746 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 122 |
| Conread position: | 22-177 |
| Cow position: | chr22:25784109-25783952 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 143 |
| Conread position: | 22-200 |
| Cow position: | chr22:27223951-27224121 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 46 |
| Conread position: | 23-161 |
| Cow position: | chr22:15623138-15623281 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 23-171 |
| Cow position: | chr22:10683846-10683696 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 19, 129 |
| Conread position: | 23-172 |
| Cow position: | chr22:24066415-24066269 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 84, 61 |
| Conread position: | 23-181 |
| Cow position: | chr22:9127221-9127384 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 72 |
| Conread position: | 23-182 |
| Cow position: | chr22:15090559-15090717 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 61 |
| Conread position: | 23-192 |
| Cow position: | chr22:11778796-11778621 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 23-193 |
| Cow position: | chr22:30269232-30269398 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 151, 73 |
| Conread position: | 23-194 |
| Cow position: | chr22:23865280-23865457 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 152 |
| Conread position: | 23-195 |
| Cow position: | chr22:13688293-13688110 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 23-195 |
| Cow position: | chr22:13840956-13841128 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 86 |
| Conread position: | 23-195 |
| Cow position: | chr22:16044606-16044428 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 20, 77 |
| Conread position: | 23-196 |
| Cow position: | chr22:19040550-19040374 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 23-196 |
| Cow position: | chr22:41245064-41245237 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 153, 86 |
| Conread position: | 23-203 |
| Cow position: | chr22:5337779-5337601 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 24-186 |
| Cow position: | chr22:23861327-23861166 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 151, 33 |
| Conread position: | 24-195 |
| Cow position: | chr22:845722-845891 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 166, 84 |
| Conread position: | 24-204 |
| Cow position: | chr22:35382434-35382247 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 25-167 |
| Cow position: | chr22:26081077-26080928 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 25-195 |
| Cow position: | chr22:37324367-37324532 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 25-197 |
| Cow position: | chr22:27514489-27514661 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 25-204 |
| Cow position: | chr22:33386682-33386507 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 153, 13 |
| Conread position: | 26-196 |
| Cow position: | chr22:34953627-34953803 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 62, 107 |
| Conread position: | 28-181 |
| Cow position: | chr22:4974600-4974448 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 82 |
| Conread position: | 33-186 |
| Cow position: | chr22:13057869-13057714 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 34-188 |
| Cow position: | chr22:6566817-6566664 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 34-195 |
| Cow position: | chr22:2623689-2623530 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 125, 74 |
| Conread position: | 34-203 |
| Cow position: | chr22:17814054-17814222 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 76 |
| Conread position: | 35-186 |
| Cow position: | chr22:42612292-42612438 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 35-189 |
| Cow position: | chr22:11746072-11745921 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 140, 56 |
| Conread position: | 35-194 |
| Cow position: | chr22:33448253-33448093 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 55 |
| Conread position: | 38-195 |
| Cow position: | chr22:35520423-35520267 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 38-204 |
| Cow position: | chr22:7518254-7518421 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 46 |
| Conread position: | 39-204 |
| Cow position: | chr22:26969617-26969780 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 68, 42 |
| Conread position: | 41-204 |
| Cow position: | chr22:32221480-32221640 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 43-204 |
| Cow position: | chr22:139465-139303 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 45-204 |
| Cow position: | chr22:15666051-15666210 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 48-192 |
| Cow position: | chr22:13235382-13235525 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 78-192 |
| Cow position: | chr22:45355243-45355367 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 84-197 |
| Cow position: | chr22:24072011-24071898 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.