Cow genome map
| Conread name: | Pig4-TMW8019J06 |
| Conread position: | 10-167 |
| Cow position: | chr24:25229273-25229116 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-181 |
| Cow position: | chr24:14617441-14617610 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 10-195 |
| Cow position: | chr24:27341239-27341053 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 11-155 |
| Cow position: | chr24:39500496-39500349 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 11-170 |
| Cow position: | chr24:35529709-35529865 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 146, 70 |
| Conread position: | 11-174 |
| Cow position: | chr24:28279427-28279584 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 119 |
| Conread position: | 11-188 |
| Cow position: | chr24:37205093-37204915 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 143 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 11-189 |
| Cow position: | chr24:43733755-43733935 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 11-196 |
| Cow position: | chr24:40091786-40091608 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 11-197 |
| Cow position: | chr24:27633199-27633379 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 169, 59 |
| Conread position: | 11-204 |
| Cow position: | chr24:6507978-6507790 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 167, 73 |
| Conread position: | 11-204 |
| Cow position: | chr24:23685275-23685090 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 165, 66 |
| Conread position: | 11-204 |
| Cow position: | chr24:32758978-32758780 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 12-204 |
| Cow position: | chr24:39955259-39955074 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 111 |
| Conread position: | 16-195 |
| Cow position: | chr24:19633864-19634040 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 21-177 |
| Cow position: | chr24:6341966-6342134 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 21-182 |
| Cow position: | chr24:27683646-27683489 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 21-186 |
| Cow position: | chr24:39681651-39681814 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 94, 71 |
| Conread position: | 21-187 |
| Cow position: | chr24:40129918-40130088 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 21-192 |
| Cow position: | chr24:18787123-18786952 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 155, 15 |
| Conread position: | 21-195 |
| Cow position: | chr24:30860432-30860604 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 21-195 |
| Cow position: | chr24:32158476-32158305 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 159, 73 |
| Conread position: | 21-195 |
| Cow position: | chr24:42419184-42419020 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 148, 14 |
| Conread position: | 21-196 |
| Cow position: | chr24:7401423-7401248 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 60 |
| Conread position: | 21-196 |
| Cow position: | chr24:31378551-31378725 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 7, 114 |
| Conread position: | 21-196 |
| Cow position: | chr24:39258961-39259129 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 155, 71 |
| Conread position: | 21-197 |
| Cow position: | chr24:7079582-7079762 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 109 |
| Conread position: | 21-213 |
| Cow position: | chr24:12992851-12993042 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 75 |
| Conread position: | 21-217 |
| Cow position: | chr24:25677829-25678029 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 22-176 |
| Cow position: | chr24:29041832-29041982 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 114 |
| Conread position: | 22-183 |
| Cow position: | chr24:38266990-38267147 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 104, 31 |
| Conread position: | 22-186 |
| Cow position: | chr24:35568984-35569145 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 154, 34 |
| Conread position: | 22-204 |
| Cow position: | chr24:13297917-13297738 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 154, 107 |
| Conread position: | 23-177 |
| Cow position: | chr24:29708006-29707845 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 23-182 |
| Cow position: | chr24:14746433-14746591 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 23-204 |
| Cow position: | chr24:15861803-15861622 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 86 |
| Conread position: | 24-162 |
| Cow position: | chr24:40346711-40346573 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 86, 22 |
| Conread position: | 24-195 |
| Cow position: | chr24:28062747-28062916 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 88 |
| Conread position: | 25-189 |
| Cow position: | chr24:6061599-6061435 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 63, 131 |
| Conread position: | 26-167 |
| Cow position: | chr24:20862156-20862016 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 26-204 |
| Cow position: | chr24:2970805-2970629 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 28-154 |
| Cow position: | chr24:30940639-30940513 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 32-196 |
| Cow position: | chr24:41333071-41332906 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 110, 51 |
| Conread position: | 32-204 |
| Cow position: | chr24:35827548-35827714 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 143, 60 |
| Conread position: | 33-179 |
| Cow position: | chr24:30226748-30226895 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 63 |
| Conread position: | 34-181 |
| Cow position: | chr24:31036162-31036307 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 112, 50 |
| Conread position: | 34-204 |
| Cow position: | chr24:5849589-5849416 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 102, 68 |
| Conread position: | 34-204 |
| Cow position: | chr24:39350404-39350239 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 146, 62 |
| Conread position: | 35-192 |
| Cow position: | chr24:24311314-24311473 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 35-194 |
| Cow position: | chr24:19769303-19769455 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 38-172 |
| Cow position: | chr24:29691482-29691344 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 38-194 |
| Cow position: | chr24:22079273-22079429 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 52 |
| Conread position: | 39-204 |
| Cow position: | chr24:27054221-27054387 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 79, 70 |
| Conread position: | 42-194 |
| Cow position: | chr24:36801202-36801347 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 137, 30 |
| Conread position: | 48-203 |
| Cow position: | chr24:40855014-40855170 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 49-196 |
| Cow position: | chr24:19611834-19611980 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 52-204 |
| Cow position: | chr24:10837573-10837726 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 59-194 |
| Cow position: | chr24:31258504-31258368 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 62-188 |
| Cow position: | chr24:11201810-11201681 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 63-190 |
| Cow position: | chr24:26455677-26455805 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 113, 0 |
Show alignments to all cow chromosomes.